Experiment set2H30 for Dechlorosoma suillum PS

Compare to:

Anaerobic growth with lactate carbon source, nitrate electron acceptor

200 most detrimental genes:

  gene name fitness t score description  
Dsui_2077 +1.2 4.8 cAMP-binding protein compare
Dsui_1553 +0.9 2.5 regulator of competence-specific genes compare
Dsui_1059 +0.9 2.1 thiamine monophosphate synthase compare
Dsui_2316 +0.8 1.3 hypothetical protein compare
Dsui_2927 +0.7 1.7 cell wall-associated hydrolase, invasion-associated protein compare
Dsui_2867 +0.7 1.8 surface antigen family protein compare
Dsui_2326 +0.7 1.2 hypothetical protein compare
Dsui_1649 +0.7 1.6 universal stress protein UspA-like protein compare
Dsui_2369 +0.7 2.5 iron-sulfur cluster assembly transcription factor IscR compare
Dsui_2072 +0.7 1.8 Pirin-related protein compare
Dsui_2243 +0.7 1.6 hypothetical protein compare
Dsui_1915 +0.6 2.0 cytochrome bd-type quinol oxidase, subunit 1 compare
Dsui_1351 +0.6 2.7 DNA/RNA helicase, superfamily II compare
Dsui_3063 +0.6 1.5 transcription elongation factor GreA compare
Dsui_3531 +0.6 1.5 Protein of unknown function (DUF3619) compare
Dsui_3095 +0.6 1.7 Protein of unknown function (DUF2726) compare
Dsui_0895 +0.6 1.5 nitrogen regulatory protein PII compare
Dsui_2098 +0.6 0.8 hypothetical protein compare
Dsui_1367 +0.6 2.1 crcB protein compare
Dsui_2476 +0.6 1.2 hypothetical protein compare
Dsui_3007 +0.6 1.3 hydrogenase assembly chaperone HypC/HupF compare
Dsui_1609 +0.6 1.5 Thiopurine S-methyltransferase (TPMT) compare
Dsui_0435 +0.6 1.3 Sel1 repeat protein compare
Dsui_1303 +0.5 2.5 hypothetical protein compare
Dsui_2762 +0.5 1.9 Protein of unknown function (DUF3617) compare
Dsui_3458 +0.5 2.2 septum site-determining protein MinC compare
Dsui_0557 +0.5 1.2 NifQ compare
Dsui_2053 +0.5 1.9 HNH endonuclease compare
Dsui_2919 +0.5 1.3 addiction module antidote protein, HigA family compare
Dsui_1891 +0.5 1.4 enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase compare
Dsui_0042 +0.5 1.0 Protein of unknown function (DUF2892) compare
Dsui_2676 +0.5 1.5 putative membrane protein compare
Dsui_3232 +0.5 1.3 activator of osmoprotectant transporter ProP compare
Dsui_2234 +0.5 1.9 hypothetical protein compare
Dsui_1314 +0.5 1.1 guanyl-specific ribonuclease Sa compare
Dsui_2395 +0.5 2.2 hypothetical protein compare
Dsui_0289 +0.5 2.0 putative membrane protein compare
Dsui_2424 +0.5 1.3 hypothetical protein compare
Dsui_3469 +0.5 1.5 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Dsui_1669 +0.5 1.2 trypsin-like serine protease with C-terminal PDZ domain compare
Dsui_0868 +0.5 2.3 hypothetical protein compare
Dsui_2060 +0.5 1.5 branched-chain amino acid ABC-type transport system, permease component compare
Dsui_3436 +0.5 1.0 beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase compare
Dsui_2949 +0.5 1.3 Fe2+-dicitrate sensor, membrane component compare
Dsui_3295 +0.5 1.7 isocitrate dehydrogenase, NADP-dependent, monomeric type compare
Dsui_0257 +0.5 2.6 hypothetical protein compare
Dsui_1529 +0.5 1.3 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_1675 +0.5 1.5 hypothetical protein compare
Dsui_3332 +0.5 2.2 glutathione S-transferase compare
Dsui_1253 +0.5 3.1 peroxiredoxin compare
Dsui_2543 +0.5 1.2 hypothetical protein compare
Dsui_0636 +0.5 2.8 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family compare
Dsui_0308 +0.5 1.7 Major Facilitator Superfamily transporter compare
Dsui_1248 +0.4 0.8 protein containing C-terminal region/beta chain of methionyl-tRNA synthetase compare
Dsui_3194 +0.4 2.0 pseudouridylate synthase I compare
Dsui_3229 +0.4 1.9 transglutaminase-like enzyme, predicted cysteine protease compare
Dsui_1233 +0.4 3.3 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component compare
Dsui_0301 +0.4 2.1 histidine kinase compare
Dsui_0754 +0.4 2.3 hypothetical protein compare
Dsui_1890 +0.4 1.7 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_2607 +0.4 1.2 hypothetical protein compare
Dsui_2076 +0.4 1.6 cytochrome c, mono- and diheme variants family compare
Dsui_0927 +0.4 1.7 cytochrome c551/c552 compare
Dsui_2166 +0.4 1.1 Fe2+-dicitrate sensor, membrane component compare
Dsui_1911 +0.4 1.8 ParB-like partition protein compare
Dsui_1438 +0.4 1.6 putative NTP binding protein (contains STAS domain) compare
Dsui_0304 +0.4 1.4 hypothetical protein compare
Dsui_0577 +0.4 1.6 Nitrogen fixation protein NifW compare
Dsui_0617 +0.4 0.6 hypothetical protein compare
Dsui_3206 +0.4 0.9 putative metal-binding protein compare
Dsui_1607 +0.4 0.8 putative membrane-associated protein compare
Dsui_0252 +0.4 1.0 TIGR00252 family protein compare
Dsui_2879 +0.4 2.0 methyl-accepting chemotaxis protein compare
Dsui_3211 +0.4 2.4 glutamate dehydrogenase/leucine dehydrogenase compare
Dsui_0131 +0.4 3.3 phosphoenolpyruvate carboxykinase (GTP) compare
Dsui_3381 +0.4 1.9 hypothetical protein compare
Dsui_3504 +0.4 1.5 rhodanese-related sulfurtransferase compare
Dsui_2971 +0.4 1.2 putative esterase of the alpha-beta hydrolase superfamily compare
Dsui_1521 +0.4 1.2 hypothetical protein compare
Dsui_0637 +0.4 2.2 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family compare
Dsui_1012 +0.4 1.8 ABC-type branched-chain amino acid transport system, periplasmic component compare
Dsui_0322 +0.4 2.2 acyl-CoA hydrolase compare
Dsui_0045 +0.4 2.1 glutaredoxin-like protein compare
Dsui_1384 +0.4 1.2 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
Dsui_2903 +0.4 2.0 methyltransferase family protein compare
Dsui_1955 +0.4 1.6 3'-5' exonuclease compare
Dsui_3288 +0.4 1.6 anti-anti-sigma factor compare
Dsui_2330 +0.4 1.1 3-hydroxyacyl-CoA dehydrogenase compare
Dsui_3130 +0.4 0.5 tRNA-Leu compare
Dsui_0879 +0.4 1.5 hypothetical protein compare
Dsui_0800 +0.4 1.8 hypothetical protein (DUF2059) compare
Dsui_0442 +0.4 1.4 monofunctional biosynthetic peptidoglycan transglycosylase compare
Dsui_0008 +0.4 2.3 hypothetical protein compare
Dsui_2872 +0.4 1.8 FKBP-type peptidyl-prolyl cis-trans isomerase compare
Dsui_1714 +0.4 2.4 anti-anti-sigma factor compare
Dsui_0118 +0.4 1.5 monothiol glutaredoxin, Grx4 family compare
Dsui_0313 +0.4 1.8 putative transcriptional regulator compare
Dsui_2544 +0.4 1.4 disulfide bond chaperone compare
Dsui_1646 +0.4 1.3 cAMP-binding protein compare
Dsui_1312 +0.4 1.3 NTP pyrophosphohydrolase compare
Dsui_0116 +0.4 1.0 alkylhydroperoxidase AhpD family core domain protein compare
Dsui_3154 +0.4 1.6 TRAP-type C4-dicarboxylate transport system, small permease component compare
Dsui_1844 +0.4 1.5 phosphate transport regulator related to PhoU compare
Dsui_1551 +0.4 1.7 DNA mismatch repair protein MutL compare
Dsui_3105 +0.4 1.8 CBS domain-containing protein compare
Dsui_3024 +0.4 2.2 phosphate transport regulator related to PhoU compare
Dsui_3027 +0.4 1.7 coenzyme F420-reducing hydrogenase, alpha subunit compare
Dsui_0043 +0.4 1.8 cAMP-binding protein compare
Dsui_2320 +0.4 1.5 Protein of unknown function (DUF2863) compare
Dsui_3171 +0.4 0.8 putative protein-disulfide isomerase compare
Dsui_0016 +0.3 1.5 transcriptional regulator compare
Dsui_3151 +0.3 0.7 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_3061 +0.3 1.8 putative RNA-binding protein, YhbY family compare
Dsui_2145 +0.3 0.8 FtsH-interacting integral membrane protein compare
Dsui_0425 +0.3 0.8 putative Fe-S oxidoreductase compare
Dsui_0455 +0.3 1.2 putative integral membrane protein compare
Dsui_1556 +0.3 2.0 RND family efflux transporter, MFP subunit compare
Dsui_2187 +0.3 0.9 acyl-CoA synthetase/AMP-acid ligase compare
Dsui_1832 +0.3 1.1 nitrate ABC transporter, permease protein compare
Dsui_2321 +0.3 2.3 site-specific recombinase compare
Dsui_3001 +0.3 1.5 putative domain HDIG-containing protein compare
Dsui_1295 +0.3 2.9 lipid A core-O-antigen ligase-like enyme compare
Dsui_1824 +0.3 1.6 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_2976 +0.3 1.0 Fe2+-dicitrate sensor, membrane component compare
Dsui_2911 +0.3 0.9 cation/cationic drug transporter compare
Dsui_0447 +0.3 1.7 putative esterase compare
Dsui_2385 +0.3 2.1 transcription-repair coupling factor Mfd compare
Dsui_1590 +0.3 1.0 hypothetical protein compare
Dsui_1524 +0.3 1.9 transcriptional regulator compare
Dsui_3478 +0.3 1.6 hypothetical protein compare
Dsui_3106 +0.3 1.3 hypothetical protein compare
Dsui_0598 +0.3 0.9 hypothetical protein compare
Dsui_1658 +0.3 0.9 uncharacterized protein probably involved in high-affinity Fe2+ transport compare
Dsui_2538 +0.3 1.7 acetoacetyl-CoA reductase compare
Dsui_1381 +0.3 0.5 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family compare
Dsui_0382 +0.3 1.4 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Dsui_0191 +0.3 1.1 hypothetical protein compare
Dsui_0989 +0.3 2.1 amidohydrolase compare
Dsui_3210 +0.3 1.3 hypothetical protein compare
Dsui_3518 +0.3 1.5 putative membrane protein compare
Dsui_0129 +0.3 1.7 putative esterase of the alpha-beta hydrolase superfamily compare
Dsui_2054 +0.3 0.7 hypothetical protein compare
Dsui_0390 +0.3 1.8 ribosomal protein L11 methyltransferase compare
Dsui_0178 +0.3 1.3 hypothetical protein compare
Dsui_0638 +0.3 1.8 ABC-type polar amino acid transport system, ATPase component compare
Dsui_2149 +0.3 2.0 DNA helicase, Rad3 compare
Dsui_0953 +0.3 0.8 ADP-ribosyl-(dinitrogen reductase) hydrolase compare
Dsui_1304 +0.3 0.9 cytochrome c553 compare
Dsui_0385 +0.3 1.6 hypothetical protein compare
Dsui_1187 +0.3 2.7 type IV pilus assembly protein PilM compare
Dsui_3333 +0.3 1.7 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Dsui_2378 +0.3 0.6 hypothetical protein compare
Dsui_0019 +0.3 1.5 malate synthase A compare
Dsui_2876 +0.3 1.5 RND family efflux transporter, MFP subunit compare
Dsui_0457 +0.3 0.5 Protein of unknown function (DUF2782) compare
Dsui_2183 +0.3 1.0 aldose 1-epimerase-like enzyme compare
Dsui_3347 +0.3 1.7 acetyltransferase, N-acetylglutamate synthase compare
Dsui_3091 +0.3 1.3 integral membrane protein, TerC family compare
Dsui_1816 +0.3 0.7 stringent starvation protein B compare
Dsui_0635 +0.3 2.2 periplasmic component of amino acid ABC-type transporter/signal transduction system compare
Dsui_2103 +0.3 2.2 hypothetical protein compare
Dsui_2704 +0.3 0.9 yecA family protein compare
Dsui_2296 +0.3 1.3 chemotaxis protein compare
Dsui_1161 +0.3 1.5 transglutaminase-like enzyme, predicted cysteine protease compare
Dsui_2989 +0.3 2.2 PAS domain S-box compare
Dsui_2536 +0.3 1.6 hypothetical protein compare
Dsui_1263 +0.3 2.1 TRAP-type mannitol/chloroaromatic compound transport system, small permease component compare
Dsui_1818 +0.3 1.4 anthranilate phosphoribosyltransferase compare
Dsui_3123 +0.3 2.1 methyl-accepting chemotaxis protein compare
Dsui_2393 +0.3 1.4 uncharacterized domain HDIG-containing protein compare
Dsui_2609 +0.3 0.8 hypothetical protein compare
Dsui_3505 +0.3 1.3 Protein of unknown function (DUF3478) compare
Dsui_2733 +0.3 0.7 bacterioferritin compare
Dsui_1924 +0.3 1.9 ribonucleoside-diphosphate reductase, alpha subunit compare
Dsui_1875 +0.3 0.4 hypothetical protein compare
Dsui_0421 +0.3 1.3 carbonic anhydrase compare
Dsui_2757 +0.3 1.0 spermidine synthase compare
Dsui_0078 +0.3 2.6 putative dehydrogenase compare
Dsui_3423 +0.3 1.2 hydroxypyruvate isomerase compare
Dsui_2937 +0.3 1.9 NAD/NADP transhydrogenase beta subunit compare
Dsui_1848 +0.3 0.7 arsenical-resistance protein compare
Dsui_2226 +0.3 1.1 DNA-binding domain-containing protein, AraC-type compare
Dsui_2977 +0.3 1.2 RNA polymerase sigma factor, sigma-70 family compare
Dsui_0706 +0.3 0.5 hypothetical protein compare
Dsui_0394 +0.3 1.2 sugar kinase, ribokinase compare
Dsui_2765 +0.3 1.1 putative membrane protein compare
Dsui_0618 +0.3 1.4 putative lipoprotein involved in nitrous oxide reduction compare
Dsui_0792 +0.3 1.2 hypothetical protein compare
Dsui_2929 +0.3 1.0 hypothetical protein compare
Dsui_3242 +0.3 1.2 hypothetical protein compare
Dsui_0571 +0.3 1.3 ferredoxin compare
Dsui_1690 +0.3 2.0 cAMP-binding protein compare
Dsui_3108 +0.3 1.9 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_0471 +0.3 0.6 cobalamin 5''-phosphate synthase/cobalamin synthase compare
Dsui_0998 +0.3 0.9 A/G-specific adenine glycosylase compare
Dsui_0317 +0.3 1.5 acetyl-CoA acetyltransferase compare
Dsui_1160 +0.3 1.0 hydrogenase assembly chaperone HypC/HupF compare
Dsui_1152 +0.3 1.4 Ni,Fe-hydrogenase I large subunit compare
Dsui_1869 +0.3 0.8 hypothetical protein compare
Dsui_0315 +0.3 1.4 Protein of unknown function (DUF2802) compare


Specific Phenotypes

None in this experiment

For Dechlorosoma suillum PS in anaerobic experiments

For anaerobic Sodium D,L-Lactate across organisms