Experiment set2H29 for Dechlorosoma suillum PS

Compare to:

Anaerobic growth with lactate carbon source, nitrate electron acceptor

200 most important genes:

  gene name fitness t score description  
Dsui_1581 -6.5 -4.5 response regulator compare
Dsui_1460 -5.2 -9.3 cAMP-binding protein compare
Dsui_3034 -4.9 -21.6 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent compare
Dsui_3080 -4.4 -2.5 molecular chaperone GrpE (heat shock protein) compare
Dsui_1176 -4.3 -9.1 periplasmic nitrate/nitrite reductase c-type cytochrome, NapC/NirT family compare
Dsui_1647 -4.1 -8.2 oxygen-independent coproporphyrinogen III oxidase compare
Dsui_2189 -3.9 -2.7 acyl-CoA synthetase (NDP forming) compare
Dsui_1177 -3.8 -10.1 Ethylbenzene dehydrogenase compare
Dsui_3081 -3.5 -2.4 chaperone protein DnaK compare
Dsui_1170 -3.5 -1.9 heme exporter protein CcmD compare
Dsui_0401 -2.9 -2.6 nucleoside-diphosphate-sugar epimerase compare
Dsui_1578 -2.9 -5.1 pyruvate dehydrogenase E1 component, homodimeric type compare
Dsui_3139 -2.9 -4.7 outer membrane assembly lipoprotein YfgL compare
Dsui_1970 -2.8 -5.0 metalloendopeptidase-like membrane protein compare
Dsui_1576 -2.6 -2.5 dihydrolipoamide dehydrogenase compare
Dsui_1827 -2.6 -2.5 hypothetical protein compare
Dsui_2151 -2.6 -3.9 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
Dsui_2368 -2.6 -2.4 serine O-acetyltransferase compare
Dsui_0745 -2.5 -2.4 membrane-associated lipoprotein involved in thiamine biosynthesis compare
Dsui_1947 -2.4 -1.6 nucleotide sugar dehydrogenase compare
Dsui_3110 -2.3 -6.9 nitric oxide reductase large subunit compare
Dsui_1446 -2.2 -4.2 succinyl-CoA synthetase, alpha subunit compare
Dsui_2717 -2.2 -3.8 RNA polymerase-binding protein DksA compare
Dsui_3109 -2.2 -6.4 cytochrome c, mono- and diheme variants family compare
Dsui_2153 -2.1 -6.1 molybdopterin converting factor, subunit 1 compare
Dsui_1445 -2.1 -3.6 succinyl-CoA synthetase, beta subunit compare
Dsui_0507 -2.0 -4.1 uncharacterized protein involved in formation of periplasmic nitrate reductase compare
Dsui_0099 -2.0 -2.6 putative periplasmic or secreted lipoprotein compare
Dsui_1321 -2.0 -8.3 ABC-type uncharacterized transport system, permease component compare
Dsui_3102 -2.0 -3.0 molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial compare
Dsui_0004 -1.9 -6.3 molybdenum cofactor biosynthesis protein MoaC compare
Dsui_0508 -1.9 -11.4 periplasmic nitrate reductase, large subunit compare
Dsui_1978 -1.9 -2.1 putative lipoprotein compare
Dsui_3523 -1.8 -3.8 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_3240 -1.8 -6.4 cobalamin biosynthesis protein cobD/CbiB compare
Dsui_0509 -1.8 -6.6 MauM/NapG family ferredoxin-type protein compare
Dsui_3220 -1.8 -2.0 PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase compare
Dsui_0007 -1.8 -2.1 cold shock protein compare
Dsui_1969 -1.8 -5.7 protein-L-isoaspartate and D-aspartate O-methyltransferase compare
Dsui_1094 -1.8 -2.8 shikimate kinase compare
Dsui_1928 -1.7 -3.8 cytochrome c, mono- and diheme variants family compare
Dsui_2981 -1.7 -1.1 electron transport complex, RnfABCDGE type, C subunit compare
Dsui_1084 -1.7 -10.3 bacteriophage protein gp37 compare
Dsui_1642 -1.7 -5.5 hypothetical protein compare
Dsui_2152 -1.6 -3.3 molybdenum cofactor synthesis domain protein compare
Dsui_2191 -1.6 -2.3 squalene-associated FAD-dependent desaturase compare
Dsui_0862 -1.6 -1.4 hypothetical protein compare
Dsui_1235 -1.5 -2.3 hypothetical protein compare
Dsui_2560 -1.5 -2.8 zonula occludens toxin compare
Dsui_1932 -1.5 -2.8 transcriptional regulator compare
Dsui_2816 -1.5 -2.9 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_0259 -1.5 -4.9 sulfate ABC transporter, permease protein CysW compare
Dsui_0260 -1.4 -5.6 sulfate ABC transporter, permease protein CysT compare
Dsui_3414 -1.4 -5.3 FAD/FMN-dependent dehydrogenase compare
Dsui_3207 -1.4 -1.6 ankyrin repeat-containing protein compare
Dsui_1037 -1.4 -1.3 ribosomal protein L25, Ctc-form compare
Dsui_0650 -1.4 -3.3 hypothetical protein compare
Dsui_2326 -1.4 -1.5 hypothetical protein compare
Dsui_3014 -1.4 -1.8 outer membrane protein/peptidoglycan-associated (lipo)protein compare
Dsui_1968 -1.4 -7.6 5''/3''-nucleotidase SurE compare
Dsui_3393 -1.4 -3.4 Kef-type K+ transport system, membrane component compare
Dsui_1096 -1.4 -7.9 glutamate synthase family protein compare
Dsui_3054 -1.4 -2.2 phosphate ABC transporter, permease protein PstA compare
Dsui_1577 -1.3 -1.7 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form compare
Dsui_1525 -1.3 -5.5 sulfate/thiosulfate-binding protein compare
Dsui_3299 -1.3 -8.6 Peroxiredoxin compare
Dsui_2047 -1.3 -3.0 chromate transporter, chromate ion transporter family compare
Dsui_1534 -1.3 -1.2 ribosomal protein L33 compare
Dsui_2752 -1.3 -1.9 ABC-type multidrug transport system, ATPase and permease component compare
Dsui_2275 -1.3 -2.4 putative transcriptional regulator compare
Dsui_0465 -1.3 -2.5 ADP-heptose:LPS heptosyltransferase compare
Dsui_1929 -1.3 -5.6 Prokaryotic membrane lipoprotein lipid attachment site/Cytochrome D1 heme domain protein compare
Dsui_1931 -1.2 -4.2 transcriptional regulator compare
Dsui_0399 -1.2 -3.3 symmetrical bis(5'-nucleosyl)-tetraphosphatase compare
Dsui_2433 -1.2 -5.1 aspartate/tyrosine/aromatic aminotransferase compare
Dsui_0469 -1.2 -1.8 lipopolysaccharide heptosyltransferase III, putative compare
Dsui_3117 -1.2 -2.6 hypothetical protein compare
Dsui_2259 -1.2 -2.1 hypothetical protein compare
Dsui_0520 -1.2 -8.3 transcriptional regulator compare
Dsui_2687 -1.2 -3.9 RIP metalloprotease RseP compare
Dsui_1325 -1.2 -3.3 ADP-ribose pyrophosphatase compare
Dsui_3097 -1.2 -2.3 O-6-methylguanine DNA methyltransferase compare
Dsui_3301 -1.2 -5.3 NosL compare
Dsui_3300 -1.2 -6.3 ABC-2 type transporter compare
Dsui_3484 -1.2 -1.3 putative permease compare
Dsui_0811 -1.2 -4.0 hypothetical protein compare
Dsui_3120 -1.1 -2.2 cAMP-binding protein compare
Dsui_3305 -1.1 -6.5 parallel beta-helix repeat (two copies) compare
Dsui_0992 -1.1 -1.1 putative membrane protein compare
Dsui_0963 -1.1 -4.2 collagenase-like protease compare
Dsui_3520 -1.1 -6.8 heavy metal efflux pump, cobalt-zinc-cadmium compare
Dsui_2240 -1.1 -3.1 PAS domain S-box compare
Dsui_3178 -1.1 -1.5 ABC-type antimicrobial peptide transport system, permease component compare
Dsui_3524 -1.1 -3.4 signal transduction histidine kinase compare
Dsui_0608 -1.1 -4.2 nucleoside-diphosphate-sugar epimerase compare
Dsui_0837 -1.1 -3.2 tRNA modification GTPase TrmE compare
Dsui_1236 -1.1 -5.2 molybdenum cofactor synthesis domain protein compare
Dsui_0751 -1.1 -5.3 Eco57I restriction endonuclease compare
Dsui_3382 -1.1 -2.4 universal stress protein UspA-like protein compare
Dsui_2567 -1.1 -8.0 hypothetical protein compare
Dsui_2767 -1.1 -2.2 glutaredoxin-like protein compare
Dsui_3330 -1.0 -1.5 hypothetical protein compare
Dsui_2154 -1.0 -2.6 molybdopterin converting factor, large subunit compare
Dsui_3302 -1.0 -5.1 ABC-type multidrug transport system, ATPase component compare
Dsui_3096 -1.0 -3.2 NADH dehydrogenase, FAD-containing subunit compare
Dsui_1395 -1.0 -3.0 MSHA-type pilus biogenesis protein MshL compare
Dsui_1607 -1.0 -1.7 putative membrane-associated protein compare
Dsui_1640 -1.0 -2.6 hypothetical protein compare
Dsui_1582 -1.0 -4.5 Fe-S oxidoreductase compare
Dsui_3180 -1.0 -2.5 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_1399 -1.0 -3.9 conserved hypothetical integral membrane protein compare
Dsui_0510 -1.0 -2.9 ferredoxin-type protein, NapH/MauN family compare
Dsui_2277 -1.0 -2.0 Rhs element Vgr protein compare
Dsui_1400 -1.0 -3.5 ABC-type transport system involved in resistance to organic solvents, periplasmic component compare
Dsui_3521 -0.9 -3.9 membrane-fusion protein compare
Dsui_0962 -0.9 -5.8 collagenase-like protease compare
Dsui_2549 -0.9 -5.0 hypothetical protein compare
Dsui_3506 -0.9 -4.8 putative permease, DMT superfamily compare
Dsui_0015 -0.9 -1.1 putative signal-transduction protein containing cAMP-binding and CBS domains compare
Dsui_3126 -0.9 -3.2 heme d1 biosynthesis radical SAM protein NirJ compare
Dsui_0954 -0.9 -2.4 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) compare
Dsui_0006 -0.9 -4.1 sulfur oxidation protein SoxZ compare
Dsui_2141 -0.9 -2.1 flagellar motor protein compare
Dsui_3327 -0.9 -1.8 cytochrome b compare
Dsui_3304 -0.9 -5.7 NADH:ubiquinone oxidoreductase chain I-like protein compare
Dsui_2870 -0.9 -1.6 putative permease compare
Dsui_1669 -0.9 -1.6 trypsin-like serine protease with C-terminal PDZ domain compare
Dsui_1930 -0.9 -3.5 transcriptional regulator compare
Dsui_1402 -0.9 -2.7 ABC-type transport system involved in resistance to organic solvents, auxiliary component compare
Dsui_1873 -0.9 -2.5 transcriptional regulator compare
Dsui_1002 -0.9 -1.7 prolyl oligopeptidase family protein compare
Dsui_1641 -0.9 -1.7 SirA-like protein compare
Dsui_3306 -0.9 -5.2 hypothetical protein compare
Dsui_3032 -0.9 -4.4 phosphotransacetylase compare
Dsui_3033 -0.9 -5.8 acetate kinase compare
Dsui_3303 -0.9 -4.8 ferredoxin-type protein, NapH/MauN family compare
Dsui_2718 -0.9 -3.6 polyribonucleotide nucleotidyltransferase compare
Dsui_2748 -0.8 -1.9 hypothetical protein compare
Dsui_2599 -0.8 -2.4 hypothetical protein compare
Dsui_2286 -0.8 -1.7 putative hydrolase or acyltransferase of alpha/beta superfamily compare
Dsui_0292 -0.8 -1.4 putative signal transduction protein containing EAL and modified HD-GYP domains compare
Dsui_0964 -0.8 -2.2 putative lipid carrier protein compare
Dsui_2601 -0.8 -2.1 hypothetical protein compare
Dsui_2187 -0.8 -1.7 acyl-CoA synthetase/AMP-acid ligase compare
Dsui_1026 -0.8 -2.0 putative Zn-dependent peptidase compare
Dsui_0477 -0.8 -1.4 tol-pal system protein YbgF compare
Dsui_2402 -0.8 -1.0 hypothetical protein compare
Dsui_0460 -0.8 -1.9 ADP-heptose:LPS heptosyltransferase compare
Dsui_1160 -0.8 -2.3 hydrogenase assembly chaperone HypC/HupF compare
Dsui_1398 -0.8 -3.6 ABC-type transport system involved in resistance to organic solvents, ATPase component compare
Dsui_2501 -0.8 -2.2 TniQ protein compare
Dsui_2457 -0.8 -3.9 GTP-binding protein LepA compare
Dsui_1358 -0.8 -2.4 metalloendopeptidase-like membrane protein compare
Dsui_3318 -0.8 -4.5 cytochrome c, mono- and diheme variants family compare
Dsui_0087 -0.8 -5.7 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare
Dsui_3415 -0.8 -3.8 FAD/FMN-dependent dehydrogenase compare
Dsui_2224 -0.8 -1.4 hypothetical protein compare
Dsui_2306 -0.8 -1.4 transcriptional regulator compare
Dsui_3026 -0.8 -1.3 hydrogenase maturation protease compare
Dsui_3169 -0.8 -2.0 putative metal-binding protein compare
Dsui_0258 -0.8 -2.7 sulfate ABC transporter, ATP-binding protein compare
Dsui_2562 -0.8 -1.3 hypothetical protein compare
Dsui_2694 -0.7 -1.6 ribosomal protein S2 compare
Dsui_2085 -0.7 -1.6 NADPH-dependent FMN reductase compare
Dsui_2651 -0.7 -1.2 ankyrin repeat-containing protein compare
Dsui_3351 -0.7 -1.3 cytochrome c peroxidase compare
Dsui_2745 -0.7 -1.2 methyl-accepting chemotaxis protein compare
Dsui_0625 -0.7 -2.2 putative metal-sulfur cluster biosynthetic enzyme compare
Dsui_2673 -0.7 -1.7 hypothetical protein compare
Dsui_2733 -0.7 -1.3 bacterioferritin compare
Dsui_2727 -0.7 -1.4 hypothetical protein compare
Dsui_1370 -0.7 -1.8 putative permease, DMT superfamily compare
Dsui_1759 -0.7 -2.3 flagellar hook-basal body complex protein FliE compare
Dsui_0177 -0.7 -1.6 hypothetical protein compare
Dsui_2196 -0.7 -1.3 ATP-dependent Clp protease, proteolytic subunit ClpP compare
Dsui_1356 -0.7 -1.2 hypothetical protein compare
Dsui_2043 -0.7 -1.6 cysteine synthase compare
Dsui_0489 -0.7 -1.8 DNA-binding regulatory protein, YebC/PmpR family compare
Dsui_2454 -0.7 -2.6 Positive regulator of sigma E activity compare
Dsui_2828 -0.7 -2.3 hypothetical protein compare
Dsui_1591 -0.7 -1.0 Xaa-Pro aminopeptidase compare
Dsui_2177 -0.7 -1.3 methyltransferase family protein compare
Dsui_1275 -0.7 -1.9 protein-export chaperone SecB compare
Dsui_3392 -0.7 -2.4 carboxylate-amine ligase, YbdK family compare
Dsui_0893 -0.7 -1.4 rare lipoprotein A compare
Dsui_1221 -0.6 -2.6 hypothetical protein compare
Dsui_2703 -0.6 -1.8 chromosome segregation protein SMC compare
Dsui_1533 -0.6 -1.6 disulfide bond formation protein DsbB compare
Dsui_0756 -0.6 -3.8 hypothetical protein compare
Dsui_0085 -0.6 -5.0 GDP-mannose 4,6-dehydratase compare
Dsui_3531 -0.6 -0.9 Protein of unknown function (DUF3619) compare
Dsui_2666 -0.6 -1.7 putative transcriptional regulator compare
Dsui_0215 -0.6 -1.2 hypothetical protein compare
Dsui_0103 -0.6 -2.2 transcriptional regulator compare
Dsui_1377 -0.6 -2.2 phasin family protein compare
Dsui_3522 -0.6 -1.8 outer membrane protein compare
Dsui_2516 -0.6 -2.4 putative membrane protein compare
Dsui_1109 -0.6 -2.8 ABC-type branched-chain amino acid transport systems, ATPase component compare
Dsui_0450 -0.6 -2.5 MAF protein compare
Dsui_3130 -0.6 -0.7 tRNA-Leu compare


Specific Phenotypes

None in this experiment

For Dechlorosoma suillum PS in anaerobic experiments

For anaerobic Sodium D,L-Lactate across organisms