Experiment set29S532 for Burkholderia phytofirmans PsJN

Compare to:

D-Fructose carbon source

200 most important genes:

  gene name fitness t score description  
BPHYT_RS02610 -6.2 -5.5 glycerol-3-phosphate dehydrogenase [NAD(P)+] compare
BPHYT_RS13705 -5.2 -3.6 chorismate synthase compare
BPHYT_RS17680 -4.9 -5.8 imidazole glycerol phosphate synthase subunit HisF compare
BPHYT_RS08955 -4.7 -5.5 homoserine dehydrogenase compare
BPHYT_RS18320 -4.6 -9.3 orotate phosphoribosyltransferase compare
BPHYT_RS09500 -4.6 -9.6 glucose-6-phosphate isomerase compare
BPHYT_RS02045 -4.6 -4.5 Fructokinase (EC 2.7.1.4) (from data) compare
BPHYT_RS16735 -4.5 -8.6 phosphogluconate dehydratase compare
BPHYT_RS16905 -4.5 -5.3 orotidine 5'-phosphate decarboxylase compare
BPHYT_RS17690 -4.4 -13.2 imidazole glycerol phosphate synthase compare
BPHYT_RS16270 -4.4 -6.1 phosphoglycerate kinase compare
BPHYT_RS17885 -4.3 -5.9 3-dehydroquinate synthase compare
BPHYT_RS03150 -4.3 -14.5 Phosphoglycerate dehydrogenase (EC:1.1.1.95) (from data) compare
BPHYT_RS17390 -4.3 -18.9 anthranilate synthase subunit I compare
BPHYT_RS14895 -4.2 -4.1 3-phosphoshikimate 1-carboxyvinyltransferase compare
BPHYT_RS06900 -4.2 -6.9 aspartate aminotransferase compare
BPHYT_RS17855 -4.2 -17.2 glutamate synthase compare
BPHYT_RS33875 -4.1 -11.2 tryptophan synthase subunit alpha compare
BPHYT_RS04725 -4.0 -10.2 sulfite reductase compare
BPHYT_RS17675 -3.9 -4.1 phosphoribosyl-AMP cyclohydrolase compare
BPHYT_RS33835 -3.9 -11.2 O-succinylhomoserine sulfhydrylase compare
BPHYT_RS33880 -3.9 -9.8 N-(5'-phosphoribosyl)anthranilate isomerase compare
BPHYT_RS05225 -3.9 -10.9 phosphoenolpyruvate carboxylase compare
BPHYT_RS06555 -3.9 -10.9 ketol-acid reductoisomerase compare
BPHYT_RS06545 -3.9 -11.0 acetolactate synthase compare
BPHYT_RS15920 -3.9 -13.2 argininosuccinate synthase compare
BPHYT_RS17685 -3.9 -9.5 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
BPHYT_RS12845 -3.8 -17.1 ATPase compare
BPHYT_RS14915 -3.8 -9.9 phosphoserine aminotransferase compare
BPHYT_RS17400 -3.8 -8.8 anthranilate phosphoribosyltransferase compare
BPHYT_RS33865 -3.8 -10.0 tryptophan synthase alpha chain compare
BPHYT_RS04385 -3.7 -4.3 nucleoside-diphosphate sugar oxidoreductase compare
BPHYT_RS16835 -3.7 -9.1 glyceraldehyde-3-phosphate dehydrogenase compare
BPHYT_RS15915 -3.7 -11.7 ornithine carbamoyltransferase compare
BPHYT_RS02590 -3.7 -8.0 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
BPHYT_RS01595 -3.7 -10.3 homoserine O-acetyltransferase compare
BPHYT_RS17890 -3.6 -2.4 shikimate kinase compare
BPHYT_RS33900 -3.6 -13.4 3-isopropylmalate dehydrogenase compare
BPHYT_RS17715 -3.5 -8.1 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
BPHYT_RS04740 -3.5 -7.5 sulfate adenylyltransferase subunit 2 compare
BPHYT_RS08960 -3.5 -2.3 threonine synthase compare
BPHYT_RS33915 -3.5 -7.3 isopropylmalate isomerase compare
BPHYT_RS14910 -3.4 -12.5 chorismate mutase compare
BPHYT_RS12530 -3.2 -8.1 ATP phosphoribosyltransferase regulatory subunit compare
BPHYT_RS06175 -3.1 -4.3 LPS biosynthesis compare
BPHYT_RS14855 -3.0 -2.0 ADP-L-glycero-D-manno-heptose-6-epimerase compare
BPHYT_RS17670 -3.0 -6.5 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
BPHYT_RS01590 -3.0 -11.0 methionine biosynthesis protein MetW compare
BPHYT_RS04955 -3.0 -3.1 methionyl-tRNA synthetase compare
BPHYT_RS33645 -2.9 -8.1 homoserine kinase compare
BPHYT_RS17395 -2.9 -3.8 anthranilate synthase subunit II compare
BPHYT_RS04745 -2.7 -7.1 sulfate adenylyltransferase compare
BPHYT_RS06190 -2.7 -5.6 heptosyltransferase compare
BPHYT_RS04720 -2.7 -8.9 transcriptional regulator compare
BPHYT_RS16245 -2.7 -3.5 phosphoribosylaminoimidazole carboxylase compare
BPHYT_RS04730 -2.6 -3.9 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
BPHYT_RS33840 -2.6 -7.4 amidophosphoribosyltransferase compare
BPHYT_RS04370 -2.6 -2.4 glycosyl transferase compare
BPHYT_RS02050 -2.5 -6.6 D-mannose isomerase (EC 5.3.1.7) (from data) compare
BPHYT_RS17700 -2.5 -3.3 imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) (from data) compare
BPHYT_RS10100 -2.4 -5.4 dihydroxy-acid dehydratase compare
BPHYT_RS05730 -2.4 -1.6 hypothetical protein compare
BPHYT_RS06405 -2.3 -5.7 phosphoribosylamine--glycine ligase compare
BPHYT_RS03535 -2.3 -7.3 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BPHYT_RS06610 -2.2 -1.7 triosephosphate isomerase compare
BPHYT_RS14190 -2.1 -5.1 carbamoyl phosphate synthase large subunit compare
BPHYT_RS05020 -2.0 -7.9 glucose-6-phosphate 1-dehydrogenase compare
BPHYT_RS12465 -2.0 -2.6 inositol monophosphatase compare
BPHYT_RS09515 -1.9 -1.8 phosphoribosylformylglycinamidine synthase compare
BPHYT_RS22740 -1.8 -6.5 ABC transporter permease conserved
BPHYT_RS18705 -1.8 -1.7 5,10-methylenetetrahydrofolate reductase compare
BPHYT_RS16840 -1.8 -1.7 transketolase compare
BPHYT_RS04965 -1.7 -7.6 ATP-binding protein compare
BPHYT_RS16675 -1.7 -1.1 dihydroorotase compare
BPHYT_RS06045 -1.7 -7.4 transaldolase compare
BPHYT_RS31910 -1.6 -2.0 hypothetical protein compare
BPHYT_RS09825 -1.6 -1.9 Fe-S protein compare
BPHYT_RS09145 -1.6 -8.6 poly-beta-hydroxybutyrate polymerase compare
BPHYT_RS03645 -1.6 -1.8 tRNA dimethylallyltransferase compare
BPHYT_RS14900 -1.5 -3.3 prephenate dehydrogenase compare
BPHYT_RS04400 -1.5 -2.4 Crp/Fnr family transcriptional regulator compare
BPHYT_RS14845 -1.5 -0.9 cysteine synthase compare
BPHYT_RS22735 -1.4 -4.5 sugar ABC transporter ATP-binding protein compare
BPHYT_RS15075 -1.4 -1.7 dihydrokaempferol 4-reductase compare
BPHYT_RS25575 -1.4 -1.6 alpha/beta hydrolase compare
BPHYT_RS28300 -1.4 -1.7 histone nucleoid-structuring protein H-NS compare
BPHYT_RS03400 -1.4 -1.2 ATP-dependent DNA helicase RecG compare
BPHYT_RS18340 -1.4 -1.2 n-acetyl-gamma-glutamyl-phosphate reductase compare
BPHYT_RS17405 -1.4 -1.3 indole-3-glycerol phosphate synthase compare
BPHYT_RS08000 -1.4 -3.0 antibiotic biosynthesis monooxygenase compare
BPHYT_RS02570 -1.3 -6.1 phosphocarrier protein HPr compare
BPHYT_RS14195 -1.3 -1.7 carbamoyl phosphate synthase small subunit compare
BPHYT_RS09315 -1.3 -0.8 chemotaxis protein CheY compare
BPHYT_RS11635 -1.3 -1.2 RNA polymerase subunit sigma-24 compare
BPHYT_RS15670 -1.3 -3.9 phosphoribosylglycinamide formyltransferase compare
BPHYT_RS33905 -1.3 -0.9 3-isopropylmalate dehydratase small subunit compare
BPHYT_RS12840 -1.2 -2.3 pyruvate dehydrogenase compare
BPHYT_RS10670 -1.2 -1.6 catechol 1,2-dioxygenase compare
BPHYT_RS11075 -1.2 -2.9 membrane protein compare
BPHYT_RS09385 -1.2 -1.1 FAD-dependent oxidoreductase compare
BPHYT_RS06195 -1.2 -2.4 membrane protein compare
BPHYT_RS08245 -1.2 -3.8 anti-sigma factor compare
BPHYT_RS01455 -1.2 -1.3 peptide deformylase compare
BPHYT_RS04285 -1.1 -1.6 rhamnosyltransferase compare
BPHYT_RS08565 -1.1 -0.6 dihydroorotate dehydrogenase compare
BPHYT_RS17920 -1.1 -1.4 protein CyaY compare
BPHYT_RS08850 -1.1 -0.7 transcriptional regulator compare
BPHYT_RS30795 -1.1 -1.2 short-chain dehydrogenase compare
BPHYT_RS17095 -1.1 -1.8 proline--tRNA ligase compare
BPHYT_RS05905 -1.1 -1.8 hypothetical protein compare
BPHYT_RS17380 -1.1 -6.6 ribulose-phosphate 3-epimerase compare
BPHYT_RS12900 -1.0 -1.4 transposase compare
BPHYT_RS03640 -1.0 -0.7 phosphoribosylformylglycinamidine cyclo-ligase compare
BPHYT_RS04675 -1.0 -4.2 protein-L-isoaspartate O-methyltransferase compare
BPHYT_RS30610 -1.0 -1.9 major facilitator transporter compare
BPHYT_RS24315 -1.0 -1.5 phosphoribosyltransferase compare
BPHYT_RS23940 -1.0 -1.2 GntR family transcriptional regulator compare
BPHYT_RS05960 -1.0 -3.7 endoribonuclease L-PSP compare
BPHYT_RS26355 -1.0 -1.5 hypothetical protein compare
BPHYT_RS10095 -1.0 -1.9 integrase compare
BPHYT_RS09480 -1.0 -1.0 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS24590 -1.0 -1.2 DeoR faimly transcriptional regulator compare
BPHYT_RS12925 -1.0 -1.1 exodeoxyribonuclease III compare
BPHYT_RS14060 -1.0 -1.5 peptidase M23 compare
BPHYT_RS07570 -1.0 -1.1 hypothetical protein compare
BPHYT_RS21460 -0.9 -2.3 UDP-N-acetylglucosamine 2-epimerase compare
BPHYT_RS29105 -0.9 -2.7 class V aminotransferase compare
BPHYT_RS33920 -0.9 -3.5 type II citrate synthase compare
BPHYT_RS15570 -0.9 -3.8 NAD-dependent dehydratase compare
BPHYT_RS18710 -0.9 -1.8 membrane protein compare
BPHYT_RS17100 -0.9 -3.2 RNA pyrophosphohydrolase compare
BPHYT_RS16290 -0.9 -0.9 hypothetical protein compare
BPHYT_RS09000 -0.9 -1.2 competence protein ComE compare
BPHYT_RS19920 -0.9 -1.3 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS04920 -0.9 -2.5 aspartate 1-decarboxylase compare
BPHYT_RS08950 -0.9 -4.2 aminotransferase compare
BPHYT_RS30365 -0.9 -0.9 beta-lactamase compare
BPHYT_RS27570 -0.9 -2.0 universal stress protein UspA compare
BPHYT_RS02865 -0.9 -0.8 hypothetical protein compare
BPHYT_RS01630 -0.9 -1.8 ATP-dependent protease ATPase subunit HslU compare
BPHYT_RS02905 -0.9 -7.5 RNA polymerase subunit sigma-54 compare
BPHYT_RS28575 -0.9 -0.9 transcriptional regulator compare
BPHYT_RS12150 -0.9 -6.1 PII uridylyl-transferase compare
BPHYT_RS35230 -0.9 -1.4 type 11 methyltransferase compare
BPHYT_RS24500 -0.9 -1.4 histidine kinase compare
BPHYT_RS12985 -0.9 -0.9 amino acid acetyltransferase compare
BPHYT_RS27895 -0.9 -1.7 enoyl-CoA hydratase compare
BPHYT_RS32475 -0.9 -1.7 dihydroxyacetone kinase compare
BPHYT_RS25095 -0.9 -2.0 AraC family transcriptional regulator compare
BPHYT_RS18280 -0.9 -4.8 TetR family transcriptional regulator compare
BPHYT_RS27905 -0.9 -3.2 MFS transporter compare
BPHYT_RS30085 -0.9 -1.0 hypothetical protein compare
BPHYT_RS05610 -0.9 -5.2 DNA-cytosine methyltransferase compare
BPHYT_RS31815 -0.8 -2.6 hypothetical protein compare
BPHYT_RS29540 -0.8 -1.1 aldolase compare
BPHYT_RS04595 -0.8 -1.4 cytoplasmic protein compare
BPHYT_RS28985 -0.8 -1.7 hypothetical protein compare
BPHYT_RS02690 -0.8 -5.7 protoheme IX farnesyltransferase compare
BPHYT_RS25070 -0.8 -1.2 choline ABC transporter permease compare
BPHYT_RS29620 -0.8 -1.0 hypothetical protein compare
BPHYT_RS10830 -0.8 -1.7 carbon monoxide dehydrogenase compare
BPHYT_RS03570 -0.8 -3.5 heat-inducible transcription repressor HrcA compare
BPHYT_RS13350 -0.8 -2.3 shikimate kinase compare
BPHYT_RS30750 -0.8 -1.0 GntR family transcriptional regulator compare
BPHYT_RS03625 -0.8 -5.1 Histidinol-phosphatase (EC:3.1.3.15) (from data) compare
BPHYT_RS20905 -0.8 -1.7 hypothetical protein compare
BPHYT_RS23650 -0.8 -0.7 hypothetical protein compare
BPHYT_RS08165 -0.7 -1.4 pilus assembly protein TadE compare
BPHYT_RS02480 -0.7 -1.5 alkaline phosphatase compare
BPHYT_RS30760 -0.7 -2.5 MmgE/PrpD family protein compare
BPHYT_RS17520 -0.7 -2.2 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase compare
BPHYT_RS28900 -0.7 -1.8 2-oxo-hepta-3-ene-1,7-dioic acid hydratase compare
BPHYT_RS33375 -0.7 -2.1 membrane protein compare
BPHYT_RS20085 -0.7 -1.5 mannosyltransferase compare
BPHYT_RS22940 -0.7 -1.3 pilus assembly protein TadE compare
BPHYT_RS10240 -0.7 -1.0 translation initiation inhibitor compare
BPHYT_RS35730 -0.7 -2.0 hypothetical protein compare
BPHYT_RS33765 -0.7 -0.8 membrane protein compare
BPHYT_RS25135 -0.7 -1.3 hypothetical protein compare
BPHYT_RS11655 -0.7 -1.5 chromosome partitioning protein ParB compare
BPHYT_RS36275 -0.7 -0.7 hypothetical protein compare
BPHYT_RS04430 -0.7 -1.6 amino acid ABC transporter ATPase compare
BPHYT_RS20845 -0.7 -1.5 peroxidase compare
BPHYT_RS28410 -0.7 -1.9 ubiquinol oxidase subunit II, cyanide insensitive compare
BPHYT_RS33150 -0.7 -0.8 beta-lactamase compare
BPHYT_RS25005 -0.7 -0.6 FMN reductase compare
BPHYT_RS06685 -0.7 -0.7 NADH:ubiquinone oxidoreductase subunit M compare
BPHYT_RS23455 -0.7 -0.8 phosphorylase compare
BPHYT_RS21075 -0.7 -1.3 (2Fe-2S)-binding protein compare
BPHYT_RS07085 -0.7 -1.3 LysR family transcriptional regulator compare
BPHYT_RS14400 -0.7 -1.7 anti-sigma factor compare
BPHYT_RS36460 -0.7 -1.7 hypothetical protein compare
BPHYT_RS34920 -0.7 -1.5 IclR family transcriptional regulator compare
BPHYT_RS26310 -0.7 -1.7 ribonuclease R compare
BPHYT_RS19660 -0.7 -1.4 hypothetical protein compare
BPHYT_RS16195 -0.7 -1.9 carbon monoxide dehydrogenase subunit G compare
BPHYT_RS02235 -0.7 -1.9 beta carbonic anhydrase compare
BPHYT_RS04010 -0.7 -0.9 glycosyl transferase compare
BPHYT_RS23770 -0.7 -1.5 GntR family transcriptional regulator compare
BPHYT_RS11805 -0.7 -1.2 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source D-Fructose in Burkholderia phytofirmans PsJN

For carbon source D-Fructose across organisms