Experiment set29S531 for Burkholderia phytofirmans PsJN

Compare to:

D-Glucose carbon source

200 most detrimental genes:

  gene name fitness t score description  
BPHYT_RS18910 +1.8 2.9 FlgN compare
BPHYT_RS28370 +1.5 2.2 peroxidase compare
BPHYT_RS36415 +1.4 1.4 hypothetical protein compare
BPHYT_RS08410 +1.2 2.0 dehydrogenase compare
BPHYT_RS06710 +1.2 1.8 hypothetical protein compare
BPHYT_RS12290 +1.2 3.6 universal stress protein UspA compare
BPHYT_RS12265 +1.1 1.8 alanine acetyltransferase compare
BPHYT_RS10720 +1.1 2.3 hypothetical protein compare
BPHYT_RS08235 +1.1 1.2 nucleoprotein, Hfg, host factor I compare
BPHYT_RS01790 +1.1 10.1 LuxR family transcriptional regulator compare
BPHYT_RS18895 +1.1 2.1 flagellar basal body rod protein FlgB compare
BPHYT_RS20220 +1.1 1.9 antibiotic synthesis protein MbtH compare
BPHYT_RS26030 +1.0 2.0 cysteine hydrolase compare
BPHYT_RS01170 +1.0 2.9 hypothetical protein compare
BPHYT_RS16250 +1.0 1.3 N5-carboxyaminoimidazole ribonucleotide mutase compare
BPHYT_RS18780 +1.0 4.1 flagellar motor switch protein FliG compare
BPHYT_RS32240 +1.0 1.1 chromosome replication initiation inhibitor protein compare
BPHYT_RS31400 +1.0 1.5 methyl-accepting chemotaxis protein compare
BPHYT_RS18590 +1.0 0.9 hypothetical protein compare
BPHYT_RS29920 +1.0 1.1 hypothetical protein compare
BPHYT_RS36035 +0.9 1.9 hypothetical protein compare
BPHYT_RS02365 +0.9 1.7 hypothetical protein compare
BPHYT_RS14505 +0.9 1.8 membrane protein compare
BPHYT_RS28910 +0.9 2.2 diguanylate phosphodiesterase compare
BPHYT_RS18935 +0.9 3.5 flagellar biosynthesis regulator FlhF compare
BPHYT_RS14255 +0.9 6.9 ABC transporter compare
BPHYT_RS01315 +0.9 2.6 cupin compare
BPHYT_RS01795 +0.9 7.4 histidine kinase compare
BPHYT_RS11970 +0.9 1.6 cupin compare
BPHYT_RS14095 +0.9 2.8 phosphohistidine phosphatase compare
BPHYT_RS18775 +0.9 6.9 flagellar M-ring protein FliF compare
BPHYT_RS13605 +0.9 0.9 tRNA-Pro compare
BPHYT_RS30010 +0.9 1.7 cell division protein compare
BPHYT_RS15810 +0.9 1.2 citrate synthase compare
BPHYT_RS18635 +0.9 2.1 LamB/YcsF family protein compare
BPHYT_RS30450 +0.9 1.1 ABC transporter permease compare
BPHYT_RS10435 +0.9 3.0 ThiJ/PfpI domain-containing protein compare
BPHYT_RS18830 +0.9 5.6 flagellar biosynthesis protein FliQ compare
BPHYT_RS20665 +0.8 1.1 LysR family transcriptional regulator compare
BPHYT_RS08765 +0.8 1.0 ABC transporter ATP-binding protein compare
BPHYT_RS04035 +0.8 2.3 transferase compare
BPHYT_RS09650 +0.8 1.4 hypothetical protein compare
BPHYT_RS29975 +0.8 1.9 multidrug ABC transporter ATP-binding protein compare
BPHYT_RS11705 +0.8 1.2 hypothetical protein compare
BPHYT_RS14250 +0.8 6.0 glycosyl transferase compare
BPHYT_RS18880 +0.8 6.0 flagellar hook protein FlgE compare
BPHYT_RS05290 +0.8 1.2 hypothetical protein compare
BPHYT_RS18925 +0.8 5.5 RNA polymerase sigma70 compare
BPHYT_RS28485 +0.8 1.1 GntR family transcriptional regulator compare
BPHYT_RS35785 +0.8 1.7 glucose-1-dehydrogenase compare
BPHYT_RS23460 +0.8 1.0 AraC family transcriptional regulator compare
BPHYT_RS32495 +0.8 2.2 ABC transporter compare
BPHYT_RS07050 +0.8 1.7 membrane protein compare
BPHYT_RS09280 +0.8 1.1 pyridoxal-5'-phosphate-dependent protein subunit beta compare
BPHYT_RS02480 +0.8 0.9 alkaline phosphatase compare
BPHYT_RS29500 +0.8 1.4 hypothetical protein compare
BPHYT_RS02725 +0.8 2.6 GntR family transcriptional regulator compare
BPHYT_RS34490 +0.8 1.1 hypothetical protein compare
BPHYT_RS30880 +0.8 1.6 peptidase S13 compare
BPHYT_RS36365 +0.8 1.7 hypothetical protein compare
BPHYT_RS13900 +0.8 1.0 ATPase compare
BPHYT_RS22500 +0.8 2.6 transcriptional regulator compare
BPHYT_RS12855 +0.7 1.8 hypothetical protein compare
BPHYT_RS09860 +0.7 0.9 pilus assembly protein PilP compare
BPHYT_RS34655 +0.7 1.6 2-amino-3-ketobutyrate CoA ligase compare
BPHYT_RS21905 +0.7 0.9 IclR family transcriptional regulator compare
BPHYT_RS25340 +0.7 1.3 sulfatase compare
BPHYT_RS08665 +0.7 0.8 hypothetical protein compare
BPHYT_RS18860 +0.7 3.5 flagellar P-ring protein FlgI compare
BPHYT_RS02755 +0.7 1.1 cyd operon protein YbgT compare
BPHYT_RS33385 +0.7 1.5 major facilitator superfamily protein compare
BPHYT_RS06975 +0.7 1.2 glutamate racemase compare
BPHYT_RS08385 +0.7 1.2 secretion protein compare
BPHYT_RS18790 +0.7 4.9 ATP synthase compare
BPHYT_RS09480 +0.7 0.8 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS25780 +0.7 0.8 DeoR faimly transcriptional regulator compare
BPHYT_RS10845 +0.7 1.4 UbiD family decarboxylase compare
BPHYT_RS18855 +0.7 3.4 flagellar rod assembly protein FlgJ compare
BPHYT_RS28850 +0.7 2.4 hypothetical protein compare
BPHYT_RS36435 +0.7 0.9 hypothetical protein compare
BPHYT_RS20545 +0.7 1.5 hypothetical protein compare
BPHYT_RS27455 +0.7 0.6 rod shape-determining protein MreB compare
BPHYT_RS34050 +0.7 2.6 secretion system protein F compare
BPHYT_RS10635 +0.7 2.0 transcriptional regulator compare
BPHYT_RS18795 +0.7 5.2 flagellar export protein FliJ compare
BPHYT_RS11640 +0.7 2.1 hypothetical protein compare
BPHYT_RS17905 +0.7 1.1 fimbrial assembly family protein compare
BPHYT_RS35310 +0.7 1.1 GCN5 family N-acetyltransferase compare
BPHYT_RS25295 +0.7 1.7 cobalt transporter compare
BPHYT_RS24730 +0.7 2.3 AraC family transcriptional regulator compare
BPHYT_RS20130 +0.7 1.8 diguanylate phosphodiesterase compare
BPHYT_RS15515 +0.7 1.5 D-aminopeptidase compare
BPHYT_RS13390 +0.7 0.9 IclR family transcriptional regulator compare
BPHYT_RS28480 +0.7 1.8 hydroxyglutarate oxidase compare
BPHYT_RS23895 +0.7 1.6 hypothetical protein compare
BPHYT_RS11245 +0.7 2.1 ATPase compare
BPHYT_RS14735 +0.7 1.1 hypothetical protein compare
BPHYT_RS23650 +0.7 0.8 hypothetical protein compare
BPHYT_RS26240 +0.7 1.5 hypothetical protein compare
BPHYT_RS18865 +0.7 2.5 flagellar L-ring protein FlgH compare
BPHYT_RS33460 +0.7 1.0 protocatechuate 3,4-dioxygenase subunit alpha compare
BPHYT_RS16880 +0.6 1.1 malic enzyme compare
BPHYT_RS07605 +0.6 1.8 hypothetical protein compare
BPHYT_RS25165 +0.6 1.2 HTH-type transcriptional regulator BetI compare
BPHYT_RS09395 +0.6 2.0 ABC transporter permease compare
BPHYT_RS18945 +0.6 5.4 flagellar biosynthesis protein FlhB compare
BPHYT_RS23890 +0.6 1.2 MFS transporter compare
BPHYT_RS32525 +0.6 1.1 hypothetical protein compare
BPHYT_RS16815 +0.6 1.7 ureidoglycolate hydrolase compare
BPHYT_RS17760 +0.6 3.5 ABC transporter permease compare
BPHYT_RS32210 +0.6 1.3 hypothetical protein compare
BPHYT_RS29945 +0.6 1.3 histidine kinase compare
BPHYT_RS06470 +0.6 0.9 membrane protein compare
BPHYT_RS13250 +0.6 2.0 hypothetical protein compare
BPHYT_RS33515 +0.6 3.6 porin compare
BPHYT_RS21340 +0.6 2.0 2OG-Fe(II) oxygenase compare
BPHYT_RS24540 +0.6 2.0 DMSO reductase compare
BPHYT_RS33695 +0.6 2.6 molybdenum ABC transporter ATPase compare
BPHYT_RS25770 +0.6 1.1 hypothetical protein compare
BPHYT_RS02425 +0.6 2.2 hypothetical protein compare
BPHYT_RS29035 +0.6 1.2 arsenic transporter compare
BPHYT_RS19010 +0.6 3.4 flagellar motor protein MotB compare
BPHYT_RS18810 +0.6 4.1 flagellar motor switch protein FliM compare
BPHYT_RS24350 +0.6 1.2 hypothetical protein compare
BPHYT_RS22060 +0.6 5.5 amino acid transporter compare
BPHYT_RS27485 +0.6 1.9 NAD-dependent dehydratase compare
BPHYT_RS33110 +0.6 1.8 chloroperoxidase compare
BPHYT_RS31900 +0.6 1.3 short-chain dehydrogenase/reductase SDR compare
BPHYT_RS34450 +0.6 2.2 LysR family transcriptional regulator compare
BPHYT_RS19025 +0.6 3.7 transcriptional regulator compare
BPHYT_RS22865 +0.6 2.0 ATPase compare
BPHYT_RS25955 +0.6 1.1 transcriptional regulator compare
BPHYT_RS26855 +0.6 1.3 carboxyvinyl-carboxyphosphonate phosphorylmutase compare
BPHYT_RS28930 +0.6 0.8 chromosome partitioning protein ParA compare
BPHYT_RS00115 +0.6 1.1 acetaldehyde dehydrogenase compare
BPHYT_RS30455 +0.6 1.9 transketolase compare
BPHYT_RS21070 +0.6 1.1 ferredoxin compare
BPHYT_RS18870 +0.6 3.4 flagellar basal body rod protein FlgG compare
BPHYT_RS18900 +0.6 5.0 flagella basal body P-ring formation protein FlgA compare
BPHYT_RS00980 +0.6 0.8 GCN5 family acetyltransferase compare
BPHYT_RS31245 +0.6 2.9 peptide ABC transporter ATP-binding protein compare
BPHYT_RS36385 +0.6 0.6 TetR family transcriptional regulator compare
BPHYT_RS21495 +0.6 0.9 ABC transporter compare
BPHYT_RS08355 +0.6 1.2 hypothetical protein compare
BPHYT_RS24225 +0.6 2.2 hypothetical protein compare
BPHYT_RS10255 +0.6 1.3 LysR family transcriptional regulator compare
BPHYT_RS23390 +0.6 1.9 hypothetical protein compare
BPHYT_RS28920 +0.6 1.1 cellulose synthase compare
BPHYT_RS18940 +0.6 4.5 flagellar biosynthesis protein FlhA compare
BPHYT_RS09245 +0.6 1.9 ABC transporter ATP-binding protein compare
BPHYT_RS26680 +0.6 2.0 oxidoreductase compare
BPHYT_RS26880 +0.6 1.4 ketosteroid isomerase compare
BPHYT_RS23275 +0.6 1.9 3-methylcrotonyl-CoA carboxylase subunit alpha compare
BPHYT_RS33360 +0.6 1.2 formyl-CoA transferase compare
BPHYT_RS28235 +0.6 1.8 L-rhamnose-1-dehydrogenase ( EC 1.1.1.173) (from data) compare
BPHYT_RS04510 +0.6 2.1 urease subunit alpha compare
BPHYT_RS13815 +0.6 2.3 hypothetical protein compare
BPHYT_RS09310 +0.6 4.0 sensor histidine kinase compare
BPHYT_RS35675 +0.6 1.6 short-chain dehydrogenase compare
BPHYT_RS21335 +0.6 1.6 CDP-alcohol phosphatidyltransferase compare
BPHYT_RS06255 +0.6 2.1 spore coat protein U compare
BPHYT_RS11480 +0.6 2.0 heme ABC transporter ATP-binding protein compare
BPHYT_RS30425 +0.6 0.9 LysR family transcriptional regulator compare
BPHYT_RS25250 +0.6 1.4 porin compare
BPHYT_RS24220 +0.6 0.9 alpha/beta hydrolase compare
BPHYT_RS18800 +0.6 4.5 flagellar hook-length control protein compare
BPHYT_RS29295 +0.6 2.6 FAD-dependent oxidoreductase compare
BPHYT_RS23990 +0.6 0.9 N-hydroxyarylamine O-acetyltransferase compare
BPHYT_RS33375 +0.5 1.9 membrane protein compare
BPHYT_RS13585 +0.5 1.4 amino acid ABC transporter permease compare
BPHYT_RS04990 +0.5 1.2 hypothetical protein compare
BPHYT_RS00725 +0.5 1.4 hypothetical protein compare
BPHYT_RS07320 +0.5 1.0 dihydrodipicolinate synthetase compare
BPHYT_RS25830 +0.5 1.3 sugar ABC transporter substrate-binding protein compare
BPHYT_RS25210 +0.5 0.9 drug:proton antiporter compare
BPHYT_RS22835 +0.5 0.8 flagellar motor protein MotA compare
BPHYT_RS18875 +0.5 3.8 flagellar basal body rod protein FlgF compare
BPHYT_RS04890 +0.5 0.7 cobalamin biosynthesis protein CobD compare
BPHYT_RS09435 +0.5 1.0 MarR family transcriptional regulator compare
BPHYT_RS09085 +0.5 1.1 mannosyltransferase compare
BPHYT_RS23230 +0.5 0.4 histidine kinase compare
BPHYT_RS23535 +0.5 1.6 ABC transporter substrate-binding protein compare
BPHYT_RS02505 +0.5 1.7 spermidine/putrescine ABC transporter ATPase compare
BPHYT_RS18265 +0.5 1.8 phenylacetate-CoA oxygenase subunit PaaJ compare
BPHYT_RS34905 +0.5 1.8 hypothetical protein compare
BPHYT_RS18825 +0.5 2.1 flagellar biosynthesis protein FliP compare
BPHYT_RS21160 +0.5 1.3 NAD(P) transhydrogenase subunit beta compare
BPHYT_RS21445 +0.5 1.4 sugar ABC transporter ATP-binding protein compare
BPHYT_RS24440 +0.5 2.1 type VI secretion protein compare
BPHYT_RS11130 +0.5 2.8 chemotaxis protein compare
BPHYT_RS09850 +0.5 1.1 molybdopterin oxidoreductase compare
BPHYT_RS18885 +0.5 3.1 flagellar basal body rod modification protein FlgD compare
BPHYT_RS02035 +0.5 0.8 hypothetical protein compare
BPHYT_RS18890 +0.5 3.9 flagellar basal body rod protein FlgC compare
BPHYT_RS33690 +0.5 1.3 molybdate ABC transporter permease compare
BPHYT_RS28995 +0.5 2.0 histidine kinase compare
BPHYT_RS21585 +0.5 1.7 short-chain dehydrogenase compare
BPHYT_RS04140 +0.5 1.9 polysaccharide biosynthesis protein compare
BPHYT_RS10965 +0.5 1.4 hypothetical protein compare
BPHYT_RS10270 +0.5 1.3 D-amino acid dehydrogenase compare


Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in carbon source experiments

For carbon source D-Glucose across organisms