Experiment set29S530 for Burkholderia phytofirmans PsJN

Compare to:

Sodium D,L-Lactate carbon source

200 most detrimental genes:

  gene name fitness t score description  
BPHYT_RS25335 +2.1 2.2 hypothetical protein compare
BPHYT_RS29035 +1.3 2.1 arsenic transporter compare
BPHYT_RS31400 +1.1 1.9 methyl-accepting chemotaxis protein compare
BPHYT_RS03945 +1.1 3.2 hypothetical protein compare
BPHYT_RS12550 +1.1 1.3 GTP-binding protein HflX compare
BPHYT_RS09280 +1.0 1.6 pyridoxal-5'-phosphate-dependent protein subunit beta compare
BPHYT_RS18910 +1.0 1.9 FlgN compare
BPHYT_RS36355 +1.0 2.2 hypothetical protein compare
BPHYT_RS16250 +1.0 1.3 N5-carboxyaminoimidazole ribonucleotide mutase compare
BPHYT_RS23460 +0.9 1.3 AraC family transcriptional regulator compare
BPHYT_RS04890 +0.9 1.4 cobalamin biosynthesis protein CobD compare
BPHYT_RS20130 +0.9 2.7 diguanylate phosphodiesterase compare
BPHYT_RS26185 +0.9 1.4 thioesterase compare
BPHYT_RS25470 +0.9 1.6 alkylhydroperoxidase compare
BPHYT_RS31890 +0.9 1.5 transposase compare
BPHYT_RS23155 +0.9 1.6 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) (from data) compare
BPHYT_RS18830 +0.9 7.1 flagellar biosynthesis protein FliQ compare
BPHYT_RS08130 +0.9 1.6 transposase compare
BPHYT_RS13605 +0.8 0.9 tRNA-Pro compare
BPHYT_RS28350 +0.8 1.9 fatty acid desaturase compare
BPHYT_RS18865 +0.8 3.3 flagellar L-ring protein FlgH compare
BPHYT_RS13160 +0.8 1.7 membrane protein compare
BPHYT_RS05235 +0.8 1.6 bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase compare
BPHYT_RS29500 +0.8 1.6 hypothetical protein compare
BPHYT_RS01790 +0.8 7.8 LuxR family transcriptional regulator compare
BPHYT_RS18775 +0.8 7.2 flagellar M-ring protein FliF compare
BPHYT_RS18780 +0.8 4.7 flagellar motor switch protein FliG compare
BPHYT_RS06255 +0.8 3.1 spore coat protein U compare
BPHYT_RS20545 +0.8 1.8 hypothetical protein compare
BPHYT_RS05320 +0.8 1.4 beta-lactamase compare
BPHYT_RS15710 +0.8 0.8 ATP-dependent Clp protease ATP-binding protein compare
BPHYT_RS06990 +0.8 1.1 membrane protein compare
BPHYT_RS32525 +0.8 1.2 hypothetical protein compare
BPHYT_RS22910 +0.8 1.0 hypothetical protein compare
BPHYT_RS11155 +0.8 1.2 hypothetical protein compare
BPHYT_RS29920 +0.8 0.9 hypothetical protein compare
BPHYT_RS01965 +0.8 1.4 tRNA-Ala compare
BPHYT_RS18870 +0.8 3.8 flagellar basal body rod protein FlgG compare
BPHYT_RS27305 +0.8 1.6 hypothetical protein compare
BPHYT_RS10185 +0.7 1.3 MarR family transcriptional regulator compare
BPHYT_RS14250 +0.7 5.4 glycosyl transferase compare
BPHYT_RS18875 +0.7 4.7 flagellar basal body rod protein FlgF compare
BPHYT_RS32960 +0.7 1.4 short-chain dehydrogenase compare
BPHYT_RS11310 +0.7 1.1 LysR family transcriptional regulator compare
BPHYT_RS22540 +0.7 1.8 metal ABC transporter permease compare
BPHYT_RS05065 +0.7 2.5 DNA mismatch repair protein MutS compare
BPHYT_RS25830 +0.7 1.7 sugar ABC transporter substrate-binding protein compare
BPHYT_RS23830 +0.7 2.0 acetyl-CoA hydrolase compare
BPHYT_RS30185 +0.7 2.1 DNA-directed RNA polymerase subunit alpha compare
BPHYT_RS10270 +0.7 1.6 D-amino acid dehydrogenase compare
BPHYT_RS18945 +0.7 4.9 flagellar biosynthesis protein FlhB compare
BPHYT_RS18790 +0.7 4.6 ATP synthase compare
BPHYT_RS01795 +0.7 5.5 histidine kinase compare
BPHYT_RS18890 +0.7 4.9 flagellar basal body rod protein FlgC compare
BPHYT_RS31900 +0.7 2.3 short-chain dehydrogenase/reductase SDR compare
BPHYT_RS27580 +0.7 1.8 F0F1 ATP synthase subunit alpha compare
BPHYT_RS35115 +0.7 1.6 phospholipase C compare
BPHYT_RS18420 +0.7 1.7 hypothetical protein compare
BPHYT_RS22135 +0.7 1.6 3-ketoacyl-ACP reductase compare
BPHYT_RS18825 +0.7 3.7 flagellar biosynthesis protein FliP compare
BPHYT_RS23390 +0.7 2.6 hypothetical protein compare
BPHYT_RS23350 +0.7 1.8 NAD-dependent epimerase/dehydratase compare
BPHYT_RS12325 +0.7 1.7 GNAT family acetyltransferase compare
BPHYT_RS18810 +0.7 5.2 flagellar motor switch protein FliM compare
BPHYT_RS28090 +0.7 1.7 ferredoxin compare
BPHYT_RS20665 +0.6 0.8 LysR family transcriptional regulator compare
BPHYT_RS28370 +0.6 0.9 peroxidase compare
BPHYT_RS04625 +0.6 1.9 urea ABC transporter ATP-binding protein compare
BPHYT_RS18800 +0.6 4.1 flagellar hook-length control protein compare
BPHYT_RS26490 +0.6 1.0 hypothetical protein compare
BPHYT_RS18785 +0.6 1.8 flagellar assembly protein FliH compare
BPHYT_RS26570 +0.6 0.7 5'-nucleotidase compare
BPHYT_RS10115 +0.6 1.8 hypothetical protein compare
BPHYT_RS05570 +0.6 1.8 hypothetical protein compare
BPHYT_RS29850 +0.6 1.2 protein tyrosine kinase compare
BPHYT_RS22835 +0.6 0.7 flagellar motor protein MotA compare
BPHYT_RS12590 +0.6 0.8 dual-specificity RNA methyltransferase RlmN compare
BPHYT_RS35310 +0.6 0.9 GCN5 family N-acetyltransferase compare
BPHYT_RS26880 +0.6 1.3 ketosteroid isomerase compare
BPHYT_RS26510 +0.6 1.1 transcriptional regulator compare
BPHYT_RS00585 +0.6 2.2 hypothetical protein compare
BPHYT_RS18940 +0.6 5.3 flagellar biosynthesis protein FlhA compare
BPHYT_RS17525 +0.6 1.1 glutaredoxin compare
BPHYT_RS16290 +0.6 0.8 hypothetical protein compare
BPHYT_RS09650 +0.6 0.9 hypothetical protein compare
BPHYT_RS26035 +0.6 2.2 ABC transporter ATP-binding protein compare
BPHYT_RS28850 +0.6 1.5 hypothetical protein compare
BPHYT_RS25180 +0.6 1.8 serine hydroxymethyltransferase compare
BPHYT_RS33135 +0.6 1.5 LysR family transcriptional regulator compare
BPHYT_RS33825 +0.6 3.0 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS18795 +0.6 4.7 flagellar export protein FliJ compare
BPHYT_RS33070 +0.6 1.2 haloacid dehalogenase compare
BPHYT_RS18590 +0.6 0.5 hypothetical protein compare
BPHYT_RS12855 +0.6 1.4 hypothetical protein compare
BPHYT_RS18880 +0.6 4.5 flagellar hook protein FlgE compare
BPHYT_RS23525 +0.6 1.0 hypothetical protein compare
BPHYT_RS19025 +0.6 4.3 transcriptional regulator compare
BPHYT_RS18860 +0.6 3.5 flagellar P-ring protein FlgI compare
BPHYT_RS11745 +0.6 1.0 (2Fe-2S)-binding protein compare
BPHYT_RS00770 +0.6 0.9 conjugal transfer protein TraC compare
BPHYT_RS28605 +0.6 1.2 NADPH-dependent FMN reductase compare
BPHYT_RS27445 +0.6 1.3 hypothetical protein compare
BPHYT_RS08645 +0.6 1.4 sulfonate ABC transporter compare
BPHYT_RS22295 +0.6 0.9 LysR family transcriptional regulator compare
BPHYT_RS31635 +0.6 1.3 choline dehydrogenase compare
BPHYT_RS21025 +0.6 0.9 cation-binding protein compare
BPHYT_RS12265 +0.6 0.7 alanine acetyltransferase compare
BPHYT_RS23955 +0.6 1.8 LysR family transcriptional regulator compare
BPHYT_RS14255 +0.6 5.1 ABC transporter compare
BPHYT_RS32750 +0.6 1.0 lipoprotein compare
BPHYT_RS34150 +0.6 1.2 Asp/Glu/hydantoin racemase compare
BPHYT_RS11895 +0.6 2.1 peroxiredoxin compare
BPHYT_RS13935 +0.5 1.2 mannosyltransferase compare
BPHYT_RS11130 +0.5 1.6 chemotaxis protein compare
BPHYT_RS36250 +0.5 1.6 hypothetical protein compare
BPHYT_RS27660 +0.5 2.0 hypothetical protein compare
BPHYT_RS15810 +0.5 1.7 citrate synthase compare
BPHYT_RS30485 +0.5 0.9 ABC transporter ATP-binding protein compare
BPHYT_RS36365 +0.5 1.3 hypothetical protein compare
BPHYT_RS18885 +0.5 2.5 flagellar basal body rod modification protein FlgD compare
BPHYT_RS18935 +0.5 4.3 flagellar biosynthesis regulator FlhF compare
BPHYT_RS34295 +0.5 0.7 fimbrial protein compare
BPHYT_RS18855 +0.5 3.4 flagellar rod assembly protein FlgJ compare
BPHYT_RS20440 +0.5 0.8 IclR family transcriptional regulator compare
BPHYT_RS28860 +0.5 0.7 haloacid dehalogenase compare
BPHYT_RS34270 +0.5 1.9 LysR family transcriptional regulator compare
BPHYT_RS29750 +0.5 1.9 phosphoenolpyruvate phosphomutase compare
BPHYT_RS28485 +0.5 0.7 GntR family transcriptional regulator compare
BPHYT_RS26815 +0.5 1.9 1-aminocyclopropane-1-carboxylate deaminase compare
BPHYT_RS26620 +0.5 1.5 MFS transporter compare
BPHYT_RS18835 +0.5 1.0 flagellar biosynthesis protein FliR compare
BPHYT_RS12820 +0.5 2.4 D-alanyl-D-alanine carboxypeptidase compare
BPHYT_RS18900 +0.5 4.5 flagella basal body P-ring formation protein FlgA compare
BPHYT_RS14585 +0.5 1.1 hypothetical protein compare
BPHYT_RS26940 +0.5 1.7 nuclease compare
BPHYT_RS02650 +0.5 1.0 membrane protein compare
BPHYT_RS16065 +0.5 0.6 LacI family transcriptional regulator compare
BPHYT_RS36160 +0.5 1.4 hypothetical protein compare
BPHYT_RS18925 +0.5 3.5 RNA polymerase sigma70 compare
BPHYT_RS02880 +0.5 1.0 ATP-dependent protease compare
BPHYT_RS14205 +0.5 2.6 lytic transglycosylase compare
BPHYT_RS09040 +0.5 1.6 MerR family transcriptional regulator compare
BPHYT_RS11945 +0.5 2.3 multidrug transporter compare
BPHYT_RS30685 +0.5 1.6 ubiquinol oxidase subunit II, cyanide insensitive compare
BPHYT_RS23540 +0.5 1.5 RND transporter compare
BPHYT_RS31515 +0.5 1.3 agmatinase compare
BPHYT_RS26660 +0.5 1.5 precorrin-4 C11-methyltransferase compare
BPHYT_RS36130 +0.5 0.9 hypothetical protein compare
BPHYT_RS20595 +0.5 1.2 hypothetical protein compare
BPHYT_RS09310 +0.5 2.9 sensor histidine kinase compare
BPHYT_RS33615 +0.5 1.3 decarboxylase compare
BPHYT_RS26030 +0.5 1.1 cysteine hydrolase compare
BPHYT_RS31470 +0.5 1.8 NAD(P)H dehydrogenase (quinone) compare
BPHYT_RS30000 +0.5 1.7 hypothetical protein compare
BPHYT_RS21625 +0.5 0.7 LysR family transcriptional regulator compare
BPHYT_RS00885 +0.5 1.2 chemotaxis protein CheY compare
BPHYT_RS01120 +0.5 1.2 plasmid partitioning protein ParB compare
BPHYT_RS01170 +0.5 0.7 hypothetical protein compare
BPHYT_RS20425 +0.5 1.6 hypothetical protein compare
BPHYT_RS17085 +0.5 2.3 hypoxanthine phosphoribosyltransferase compare
BPHYT_RS05365 +0.5 0.8 3-ketoacyl-ACP reductase compare
BPHYT_RS12280 +0.5 0.6 RNA helicase compare
BPHYT_RS34470 +0.5 1.7 ABC transporter compare
BPHYT_RS36400 +0.5 0.7 hypothetical protein compare
BPHYT_RS14095 +0.5 1.0 phosphohistidine phosphatase compare
BPHYT_RS14070 +0.5 1.5 hypothetical protein compare
BPHYT_RS05765 +0.5 1.9 portal protein compare
BPHYT_RS35405 +0.5 1.4 hypothetical protein compare
BPHYT_RS13885 +0.5 0.6 myo-inositol 2-dehydrogenase compare
BPHYT_RS00900 +0.5 1.2 beta-lactamase compare
BPHYT_RS29695 +0.5 1.1 hypothetical protein compare
BPHYT_RS17165 +0.5 1.5 cell division protein ZapD compare
BPHYT_RS20715 +0.5 1.1 peptidase compare
BPHYT_RS03390 +0.5 1.7 glyoxalase compare
BPHYT_RS02365 +0.5 0.8 hypothetical protein compare
BPHYT_RS20880 +0.5 0.6 polyketide cyclase compare
BPHYT_RS21585 +0.5 1.1 short-chain dehydrogenase compare
BPHYT_RS24045 +0.5 1.2 amino acid ABC transporter compare
BPHYT_RS35205 +0.5 0.9 hypothetical protein compare
BPHYT_RS06390 +0.5 1.2 ribosome-associated protein IOJAP compare
BPHYT_RS35275 +0.5 1.0 acetyltransferase compare
BPHYT_RS30450 +0.5 0.5 ABC transporter permease compare
BPHYT_RS11275 +0.4 2.0 hypothetical protein compare
BPHYT_RS10565 +0.4 1.5 NADP oxidoreductase compare
BPHYT_RS24135 +0.4 1.7 alpha-dehydro-beta-deoxy-D-glucarate aldolase compare
BPHYT_RS22640 +0.4 0.7 hydroxyproline-2-epimerase compare
BPHYT_RS06495 +0.4 2.0 glucose-1-dehydrogenase compare
BPHYT_RS12045 +0.4 2.4 stomatin 2 compare
BPHYT_RS24755 +0.4 1.6 catalase compare
BPHYT_RS23705 +0.4 3.6 hypothetical protein compare
BPHYT_RS04140 +0.4 1.8 polysaccharide biosynthesis protein compare
BPHYT_RS25970 +0.4 0.6 urea amidolyase compare
BPHYT_RS20750 +0.4 1.0 LacI family transcriptional regulator compare
BPHYT_RS04400 +0.4 0.8 Crp/Fnr family transcriptional regulator compare
BPHYT_RS36385 +0.4 0.5 TetR family transcriptional regulator compare
BPHYT_RS13585 +0.4 1.6 amino acid ABC transporter permease compare
BPHYT_RS11495 +0.4 1.3 membrane protein compare
BPHYT_RS28040 +0.4 1.1 acyl-CoA dehydrogenase compare
BPHYT_RS06950 +0.4 1.3 LysR family transcriptional regulator compare
BPHYT_RS32495 +0.4 1.1 ABC transporter compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source Sodium D,L-Lactate in Burkholderia phytofirmans PsJN

For carbon source Sodium D,L-Lactate across organisms