Experiment set28IT079 for Klebsiella michiganensis M5al

Compare to:

Parafilmed volatile agar plate with no fungus

200 most important genes:

  gene name fitness t score description  
BWI76_RS04525 -5.0 -2.2 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS01775 -4.5 -1.1 hypothetical protein compare
BWI76_RS09645 -4.5 -1.1 thioredoxin-disulfide reductase compare
BWI76_RS17190 -4.4 -2.5 TonB system transport protein TonB compare
BWI76_RS23330 -4.1 -4.3 transcriptional regulator GalR compare
BWI76_RS06340 -4.1 -1.0 hypothetical protein compare
BWI76_RS19055 -4.0 -5.4 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS08210 -3.8 -1.4 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS00600 -3.8 -5.9 LacI family transcriptional regulator compare
BWI76_RS01350 -3.8 -1.0 NAD(P)H-flavin reductase compare
BWI76_RS27305 -3.5 -6.8 glycosyl transferase compare
BWI76_RS21580 -3.4 -1.5 SsrA-binding protein compare
BWI76_RS26075 -3.3 -3.0 DNA adenine methylase compare
BWI76_RS20155 -3.2 -1.9 NADH-quinone oxidoreductase subunit I compare
BWI76_RS00140 -3.2 -0.8 phosphate transport system regulator PhoU compare
BWI76_RS15110 -3.2 -11.0 putative excinuclease ABC subunit A compare
BWI76_RS06535 -3.1 -4.8 endopeptidase La compare
BWI76_RS07465 -3.1 -1.0 TetR family transcriptional regulator compare
BWI76_RS04100 -3.1 -3.0 peptide chain release factor 3 compare
BWI76_RS23265 -3.0 -1.9 hypothetical protein compare
BWI76_RS27275 -3.0 -5.9 hypothetical protein compare
BWI76_RS08535 -2.9 -1.2 translocation protein TolB compare
BWI76_RS19050 -2.8 -5.7 NAD(P)-dependent oxidoreductase compare
BWI76_RS09640 -2.8 -1.7 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS27280 -2.8 -5.0 polymerase compare
BWI76_RS19040 -2.7 -1.9 hypothetical protein compare
BWI76_RS08425 -2.6 -2.6 succinyl-CoA ligase subunit beta compare
BWI76_RS01630 -2.5 -0.9 16S ribosomal RNA compare
BWI76_RS21370 -2.5 -0.8 ATP-dependent RNA helicase SrmB compare
BWI76_RS14075 -2.4 -1.2 TetR family transcriptional regulator compare
BWI76_RS06910 -2.4 -1.2 transcriptional regulator compare
BWI76_RS12090 -2.4 -1.2 HNH endonuclease compare
BWI76_RS08405 -2.4 -1.8 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS09190 -2.4 -1.6 hypothetical protein compare
BWI76_RS15115 -2.4 -1.6 MFS transporter compare
BWI76_RS16485 -2.4 -1.2 ribonuclease T compare
BWI76_RS08720 -2.3 -1.6 imidazolonepropionase compare
BWI76_RS11515 -2.3 -1.1 peptide-methionine (R)-S-oxide reductase compare
BWI76_RS01135 -2.3 -4.2 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS00710 -2.3 -1.6 6-N-hydroxylaminopurine resistance protein compare
BWI76_RS19060 -2.2 -6.9 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS00180 -2.2 -0.8 F0F1 ATP synthase subunit epsilon compare
BWI76_RS08975 -2.2 -3.2 amino acid ABC transporter substrate-binding protein compare
BWI76_RS07740 -2.2 -1.3 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS04645 -2.1 -3.0 3-dehydroquinase compare
BWI76_RS11895 -2.1 -2.0 AraC family transcriptional regulator compare
BWI76_RS21660 -2.1 -1.2 antirestriction protein compare
BWI76_RS20150 -2.1 -1.4 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS16275 -2.1 -1.6 fumarate hydratase FumA compare
BWI76_RS08530 -2.1 -1.4 protein TolA compare
BWI76_RS08495 -2.1 -3.3 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS27455 -2.0 -1.6 DUF805 domain-containing protein compare
BWI76_RS01210 -2.0 -0.9 tyrosine recombinase XerC compare
BWI76_RS00345 -2.0 -2.6 protein disulfide oxidoreductase DsbA compare
BWI76_RS18165 -2.0 -0.9 NUDIX pyrophosphatase compare
BWI76_RS08205 -2.0 -2.5 DNA-binding transcriptional dual regulator NagC compare
BWI76_RS04705 -2.0 -4.1 DNA-binding transcriptional regulator FruR compare
BWI76_RS24945 -2.0 -0.9 glutamine amidotransferase compare
BWI76_RS14065 -2.0 -1.6 hypothetical protein compare
BWI76_RS25070 -2.0 -1.0 hypothetical protein compare
BWI76_RS12285 -1.9 -1.7 hypothetical protein compare
BWI76_RS12420 -1.9 -0.9 peptide ABC transporter substrate-binding protein SapA compare
BWI76_RS03415 -1.8 -3.3 LacI family transcriptional regulator compare
BWI76_RS20145 -1.8 -1.0 NADH-quinone oxidoreductase subunit K compare
BWI76_RS08390 -1.8 -2.4 hypothetical protein compare
BWI76_RS27875 -1.7 -0.9 membrane protein compare
BWI76_RS15605 -1.7 -1.3 hypothetical protein compare
BWI76_RS08500 -1.7 -2.2 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS15865 -1.7 -2.9 hypothetical protein compare
BWI76_RS20750 -1.7 -0.9 carboxysome structural protein EutK compare
BWI76_RS09625 -1.7 -1.0 hypothetical protein compare
BWI76_RS02815 -1.7 -1.4 fructose-bisphosphatase class I compare
BWI76_RS25245 -1.7 -1.9 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
BWI76_RS18815 -1.7 -2.2 nitrogenase molybdenum-iron protein alpha chain compare
BWI76_RS10530 -1.7 -1.3 GntR family transcriptional regulator with compare
BWI76_RS14935 -1.7 -0.9 NIPSNAP family containing protein compare
BWI76_RS26980 -1.7 -2.3 cold-shock protein compare
BWI76_RS03880 -1.7 -1.8 homoprotocatechuate degradation operon regulator, HpaR compare
BWI76_RS27075 -1.7 -3.6 IclR family transcriptional regulator compare
BWI76_RS08430 -1.7 -2.9 succinate--CoA ligase subunit alpha compare
BWI76_RS09910 -1.7 -8.8 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS01385 -1.6 -1.3 potassium transporter compare
BWI76_RS07435 -1.6 -3.1 LacI family transcriptional regulator compare
BWI76_RS08360 -1.6 -2.5 LamB/YcsF family protein compare
BWI76_RS09760 -1.6 -3.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS05260 -1.6 -1.0 chaperone compare
BWI76_RS09755 -1.6 -3.9 phosphoserine transaminase compare
BWI76_RS01220 -1.6 -4.1 DNA-dependent helicase II compare
BWI76_RS01200 -1.6 -0.9 diaminopimelate epimerase compare
BWI76_RS26455 -1.6 -1.8 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS27385 -1.6 -4.6 orotate phosphoribosyltransferase compare
BWI76_RS27165 -1.6 -3.5 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS20970 -1.5 -0.9 phosphoribosylglycinamide formyltransferase compare
BWI76_RS00865 -1.5 -2.2 DNA-binding transcriptional regulator OxyR compare
BWI76_RS02550 -1.5 -2.3 protease modulator HflC compare
BWI76_RS08370 -1.5 -2.2 membrane protein compare
BWI76_RS11680 -1.5 -3.5 succinylglutamate-semialdehyde dehydrogenase compare
BWI76_RS20170 -1.5 -2.1 NADH-quinone oxidoreductase subunit F compare
BWI76_RS08605 -1.5 -1.7 phosphoglyceromutase compare
BWI76_RS24635 -1.5 -2.5 autoinducer-2 (AI-2) modifying protein LsrG compare
BWI76_RS23830 -1.5 -2.4 hypothetical protein compare
BWI76_RS07970 -1.5 -1.8 hypothetical protein compare
BWI76_RS13250 -1.5 -0.8 cytochrome b561 compare
BWI76_RS25415 -1.5 -1.6 GntR family transcriptional regulator compare
BWI76_RS18455 -1.5 -0.9 tRNA-Ser compare
BWI76_RS19045 -1.4 -3.3 capsular polysaccharide biosynthesis protein compare
BWI76_RS24900 -1.4 -0.9 DeoR family transcriptional regulator compare
BWI76_RS11965 -1.4 -2.0 orotidine-5'-phosphate decarboxylase compare
BWI76_RS07640 -1.4 -1.0 short chain dehydrogenase compare
BWI76_RS10730 -1.4 -1.9 bifunctional glucose-1-phosphatase/inositol phosphatase compare
BWI76_RS08520 -1.4 -1.0 colicin transporter TolQ compare
BWI76_RS02745 -1.4 -0.8 hypothetical protein compare
BWI76_RS22475 -1.4 -1.8 heme ABC transporter ATP-binding protein compare
BWI76_RS02580 -1.4 -0.9 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS22640 -1.4 -1.3 hypothetical protein compare
BWI76_RS20895 -1.4 -3.5 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS20640 -1.4 -2.4 cysteine synthase A compare
BWI76_RS24485 -1.4 -1.0 bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase compare
BWI76_RS10990 -1.4 -1.7 dihydroorotase compare
BWI76_RS07725 -1.4 -0.8 iron-enterobactin transporter permease compare
BWI76_RS20230 -1.3 -0.7 hypothetical protein compare
BWI76_RS11285 -1.3 -1.1 transcriptional regulator compare
BWI76_RS01885 -1.3 -0.7 CsbD family protein compare
BWI76_RS01185 -1.3 -1.2 adenylate cyclase compare
BWI76_RS01090 -1.3 -2.3 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS18125 -1.3 -2.1 murein DD-endopeptidase MepM compare
BWI76_RS08385 -1.3 -1.6 citrate (Si)-synthase compare
BWI76_RS07070 -1.3 -2.9 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS01325 -1.3 -1.1 twin-arginine translocase subunit TatB compare
BWI76_RS21100 -1.3 -1.6 nucleoside-diphosphate kinase compare
BWI76_RS17280 -1.3 -2.4 patatin family protein compare
BWI76_RS09560 -1.3 -0.7 DoxX family membrane protein compare
BWI76_RS20135 -1.3 -2.5 NADH-quinone oxidoreductase subunit M compare
BWI76_RS16120 -1.3 -1.6 4-carboxymuconolactone decarboxylase compare
BWI76_RS25480 -1.3 -1.9 ribonuclease E/G compare
BWI76_RS05160 -1.3 -2.7 hypothetical protein compare
BWI76_RS15830 -1.3 -3.2 hypothetical protein compare
BWI76_RS12950 -1.2 -2.2 acriflavin resistance protein AcrA compare
BWI76_RS02810 -1.2 -2.0 sugar ABC transporter permease YjfF compare
BWI76_RS15795 -1.2 -1.9 bacteriophage CII family protein compare
BWI76_RS24850 -1.2 -2.7 DeoR family transcriptional regulator compare
BWI76_RS25280 -1.2 -1.0 RNase adaptor protein RapZ compare
BWI76_RS10365 -1.2 -1.7 class IV aminotransferase compare
BWI76_RS09765 -1.2 -1.5 metalloprotease compare
BWI76_RS08725 -1.2 -2.3 Formiminoglutamase (EC 3.5.3.8) (from data) compare
BWI76_RS21310 -1.2 -0.6 DNA repair protein RecO compare
BWI76_RS14050 -1.2 -1.4 AP endonuclease, family 2 compare
BWI76_RS26410 -1.2 -1.0 membrane protein compare
BWI76_RS10305 -1.2 -3.8 transposase compare
BWI76_RS13755 -1.2 -1.2 hypothetical protein compare
BWI76_RS24275 -1.2 -1.4 biopolymer transport protein ExbD compare
BWI76_RS03015 -1.2 -1.6 RNase E inhibitor protein compare
BWI76_RS11035 -1.2 -1.6 putative LysR-family transcriptional regulator compare
BWI76_RS02610 -1.2 -2.7 transcriptional regulator compare
BWI76_RS20160 -1.2 -1.7 NADH-quinone oxidoreductase subunit H compare
BWI76_RS25870 -1.1 -0.7 elongation factor Tu compare
BWI76_RS19850 -1.1 -1.4 tRNA-Pro compare
BWI76_RS08395 -1.1 -1.1 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS13545 -1.1 -0.7 N-acetyltransferase compare
BWI76_RS08110 -1.1 -1.3 glutamate/aspartate ABC transporter substrate-binding protein compare
BWI76_RS23480 -1.1 -5.9 EAL domain-containing protein compare
BWI76_RS17045 -1.1 -0.8 hypothetical protein compare
BWI76_RS15290 -1.1 -0.8 transcriptional regulator compare
BWI76_RS06290 -1.1 -1.2 ACP phosphodiesterase compare
BWI76_RS18870 -1.1 -0.8 protein NifZ compare
BWI76_RS14615 -1.1 -0.7 hypothetical protein compare
BWI76_RS12450 -1.1 -2.0 phage shock protein PspA compare
BWI76_RS24740 -1.1 -1.4 GntR family transcriptional regulator compare
BWI76_RS19845 -1.1 -3.2 phosphatase compare
BWI76_RS16000 -1.1 -0.7 multidrug transporter subunit MdtI compare
BWI76_RS09440 -1.1 -1.2 hypothetical protein compare
BWI76_RS17565 -1.1 -1.1 hypothetical protein compare
BWI76_RS24330 -1.1 -2.2 TIGR00156 family protein compare
BWI76_RS13185 -1.1 -2.7 MFS transporter compare
BWI76_RS23030 -1.1 -1.2 cobalamin biosynthesis protein CbiM compare
BWI76_RS21275 -1.1 -2.9 lytic transglycosylase F compare
BWI76_RS11610 -1.1 -1.4 glutamate dehydrogenase compare
BWI76_RS24500 -1.1 -1.1 urease subunit gamma compare
BWI76_RS09420 -1.0 -1.1 hypothetical protein compare
BWI76_RS22420 -1.0 -1.4 LacI family transcriptional regulator compare
BWI76_RS02865 -1.0 -2.6 hypothetical protein compare
BWI76_RS10430 -1.0 -1.8 thiol:disulfide interchange protein DsbG compare
BWI76_RS23745 -1.0 -1.7 arsenate reductase compare
BWI76_RS15960 -1.0 -1.9 LysR family transcriptional regulator compare
BWI76_RS06470 -1.0 -2.0 hypothetical protein compare
BWI76_RS17070 -1.0 -2.4 phosphoenolpyruvate synthase regulatory protein compare
BWI76_RS26685 -1.0 -2.4 glutathione-disulfide reductase compare
BWI76_RS18580 -1.0 -0.9 hypothetical protein compare
BWI76_RS22240 -1.0 -3.2 transcriptional regulator compare
BWI76_RS01120 -1.0 -3.0 O-antigen translocase compare
BWI76_RS09450 -1.0 -0.8 30S ribosomal protein S6--L-glutamate ligase compare
BWI76_RS02545 -1.0 -2.8 protease modulator HflK compare
BWI76_RS12375 -1.0 -1.4 DNA-invertase hin compare
BWI76_RS07255 -1.0 -1.4 hypothetical protein compare
BWI76_RS23140 -1.0 -1.0 carboxysome shell protein compare
BWI76_RS11110 -1.0 -1.2 cell division protein YceG compare
BWI76_RS26105 -1.0 -2.3 hypothetical protein compare
BWI76_RS14970 -1.0 -0.9 pyrroline-5-carboxylate reductase compare
BWI76_RS18410 -1.0 -1.8 drug/metabolite exporter YedA compare
BWI76_RS20965 -1.0 -2.0 phosphoribosylformylglycinamidine cyclo-ligase compare


Specific Phenotypes

For 3 genes in this experiment