Experiment set28IT079 for Klebsiella michiganensis M5al
Parafilmed volatile agar plate with no fungus
Group: agar plate interaction controlMedia: LB
Culturing: Koxy_ML2a, agar plate, Aerobic, at 30 (C), (Solid)
By: Cat_Manuel on 17-Aug-21
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Specific Phenotypes
For 3 genes in this experiment
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Molybdenum cofactor biosynthesis | 1 |
| Na+ translocating decarboxylases and related biotin-dependent enzymes | 1 |
| Pyruvate metabolism I: anaplerotic reactions, PEP | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| bis(guanylyl molybdenum cofactor) biosynthesis | 2 | 2 | 2 |
| guanylyl molybdenum cofactor biosynthesis | 1 | 1 | 1 |
| bis(guanylyl tungstenpterin) cofactor biosynthesis | 1 | 1 | 1 |
| molybdenum cofactor biosynthesis | 3 | 3 | 1 |
| bis(tungstenpterin) cofactor biosynthesis | 4 | 1 | 1 |
| methylgallate degradation | 6 | 4 | 1 |
| protocatechuate degradation I (meta-cleavage pathway) | 8 | 6 | 1 |
| superpathway of vanillin and vanillate degradation | 10 | 7 | 1 |
| syringate degradation | 12 | 6 | 1 |