Experiment set28IT074 for Klebsiella michiganensis M5al

Compare to:

Parafilmed volatile agar plate with Trichoderma atroviridae IMI

200 most important genes:

  gene name fitness t score description  
BWI76_RS08395 -6.0 -1.5 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS09645 -4.4 -1.1 thioredoxin-disulfide reductase compare
BWI76_RS23330 -4.3 -4.5 transcriptional regulator GalR compare
BWI76_RS23265 -4.3 -2.2 hypothetical protein compare
BWI76_RS20155 -4.2 -1.8 NADH-quinone oxidoreductase subunit I compare
BWI76_RS19840 -4.0 -1.0 hypothetical protein compare
BWI76_RS08520 -4.0 -1.8 colicin transporter TolQ compare
BWI76_RS27280 -4.0 -8.0 polymerase compare
BWI76_RS00865 -4.0 -3.3 DNA-binding transcriptional regulator OxyR compare
BWI76_RS08210 -3.9 -1.4 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS19055 -3.8 -5.7 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS27275 -3.7 -7.5 hypothetical protein compare
BWI76_RS21565 -3.7 -0.9 outer membrane protein assembly factor BamE compare
BWI76_RS00600 -3.5 -5.2 LacI family transcriptional regulator compare
BWI76_RS04510 -3.4 -1.5 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS15110 -3.4 -9.8 putative excinuclease ABC subunit A compare
BWI76_RS08405 -3.3 -3.2 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS27305 -3.3 -6.0 glycosyl transferase compare
BWI76_RS11155 -3.2 -1.5 penicillin-binding protein activator LpoB compare
BWI76_RS02580 -3.2 -1.4 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS06535 -3.1 -3.3 endopeptidase La compare
BWI76_RS08110 -3.0 -2.5 glutamate/aspartate ABC transporter substrate-binding protein compare
BWI76_RS21675 -2.8 -1.0 hypothetical protein compare
BWI76_RS08535 -2.8 -1.2 translocation protein TolB compare
BWI76_RS24900 -2.8 -1.4 DeoR family transcriptional regulator compare
BWI76_RS19060 -2.7 -10.7 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS06475 -2.7 -1.4 protoheme IX farnesyltransferase compare
BWI76_RS19040 -2.7 -1.9 hypothetical protein compare
BWI76_RS06730 -2.6 -1.7 lac repressor compare
BWI76_RS00345 -2.6 -3.1 protein disulfide oxidoreductase DsbA compare
BWI76_RS23830 -2.6 -4.9 hypothetical protein compare
BWI76_RS08430 -2.6 -5.8 succinate--CoA ligase subunit alpha compare
BWI76_RS07465 -2.5 -1.2 TetR family transcriptional regulator compare
BWI76_RS08385 -2.5 -2.9 citrate (Si)-synthase compare
BWI76_RS11680 -2.5 -4.4 succinylglutamate-semialdehyde dehydrogenase compare
BWI76_RS09190 -2.3 -1.6 hypothetical protein compare
BWI76_RS20895 -2.3 -2.6 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS15290 -2.3 -1.1 transcriptional regulator compare
BWI76_RS20160 -2.3 -2.0 NADH-quinone oxidoreductase subunit H compare
BWI76_RS04100 -2.3 -2.8 peptide chain release factor 3 compare
BWI76_RS00400 -2.2 -1.0 glutamine synthetase compare
BWI76_RS20150 -2.2 -1.7 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS23885 -2.2 -0.8 2-octaprenylphenol hydroxylase compare
BWI76_RS08720 -2.2 -1.2 imidazolonepropionase compare
BWI76_RS20145 -2.2 -1.1 NADH-quinone oxidoreductase subunit K compare
BWI76_RS24400 -2.2 -3.9 outer membrane channel protein TolC compare
BWI76_RS17970 -2.1 -1.9 zinc metalloprotease HtpX compare
BWI76_RS11965 -2.1 -2.3 orotidine-5'-phosphate decarboxylase compare
BWI76_RS08390 -2.1 -2.7 hypothetical protein compare
BWI76_RS01210 -2.1 -0.9 tyrosine recombinase XerC compare
BWI76_RS21580 -2.0 -1.2 SsrA-binding protein compare
BWI76_RS14075 -2.0 -1.2 TetR family transcriptional regulator compare
BWI76_RS16800 -2.0 -1.8 amino acid ABC transporter permease compare
BWI76_RS19070 -1.9 -5.0 rhamnosyltransferase compare
BWI76_RS25425 -1.9 -0.9 arginine repressor compare
BWI76_RS09640 -1.9 -1.5 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS20995 -1.9 -4.0 RNA degradosome polyphosphate kinase compare
BWI76_RS21140 -1.8 -1.3 molecular chaperone HscA compare
BWI76_RS16485 -1.8 -1.1 ribonuclease T compare
BWI76_RS26085 -1.8 -0.8 3-dehydroquinate synthase compare
BWI76_RS01185 -1.8 -1.2 adenylate cyclase compare
BWI76_RS03080 -1.8 -2.5 (Fe-S)-cluster assembly protein compare
BWI76_RS01220 -1.8 -5.1 DNA-dependent helicase II compare
BWI76_RS26075 -1.8 -2.5 DNA adenine methylase compare
BWI76_RS08530 -1.8 -1.3 protein TolA compare
BWI76_RS14870 -1.8 -1.9 hypothetical protein compare
BWI76_RS17110 -1.7 -1.1 vitamin B12 ABC transporter permease BtuC compare
BWI76_RS14770 -1.7 -1.0 PTS IIA 2 domain protein compare
BWI76_RS19935 -1.7 -1.0 hypothetical protein compare
BWI76_RS02815 -1.7 -1.5 fructose-bisphosphatase class I compare
BWI76_RS08980 -1.7 -0.8 DNA starvation/stationary phase protection protein compare
BWI76_RS20165 -1.7 -2.4 NADH-quinone oxidoreductase subunit G compare
BWI76_RS00140 -1.7 -0.6 phosphate transport system regulator PhoU compare
BWI76_RS09635 -1.7 -0.8 amino acid ABC transporter ATP-binding protein compare
BWI76_RS26095 -1.7 -0.8 shikimate kinase compare
BWI76_RS24850 -1.7 -5.8 DeoR family transcriptional regulator compare
BWI76_RS09910 -1.6 -6.3 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS27165 -1.6 -4.1 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS02995 -1.6 -6.1 aspartate carbamoyltransferase compare
BWI76_RS06485 -1.6 -1.7 cytochrome o ubiquinol oxidase subunit III compare
BWI76_RS20135 -1.6 -2.5 NADH-quinone oxidoreductase subunit M compare
BWI76_RS20130 -1.6 -3.2 NADH-quinone oxidoreductase subunit N compare
BWI76_RS17190 -1.6 -1.1 TonB system transport protein TonB compare
BWI76_RS27075 -1.6 -3.7 IclR family transcriptional regulator compare
BWI76_RS26405 -1.6 -0.9 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS24100 -1.6 -2.7 YggS family pyridoxal phosphate enzyme compare
BWI76_RS15115 -1.6 -2.2 MFS transporter compare
BWI76_RS09610 -1.6 -2.0 ATP-dependent Clp protease adaptor ClpS compare
BWI76_RS12485 -1.6 -1.7 TyrR family transcriptional regulator compare
BWI76_RS11110 -1.6 -1.6 cell division protein YceG compare
BWI76_RS18165 -1.6 -0.9 NUDIX pyrophosphatase compare
BWI76_RS08525 -1.6 -1.9 colicin transporter compare
BWI76_RS04605 -1.5 -0.9 thiamine ABC transporter ATP-binding protein compare
BWI76_RS23030 -1.5 -1.2 cobalamin biosynthesis protein CbiM compare
BWI76_RS08620 -1.5 -2.5 galactose-1-phosphate uridylyltransferase compare
BWI76_RS20360 -1.5 -0.7 cell division protein DedD compare
BWI76_RS20900 -1.5 -1.1 outer membrane protein assembly factor BamC compare
BWI76_RS10990 -1.5 -1.4 dihydroorotase compare
BWI76_RS16805 -1.5 -1.1 basic amino acid ABC transporter substrate-binding protein compare
BWI76_RS08205 -1.5 -3.1 DNA-binding transcriptional dual regulator NagC compare
BWI76_RS15530 -1.5 -1.8 hypothetical protein compare
BWI76_RS20930 -1.5 -1.1 arsenate reductase (glutaredoxin) compare
BWI76_RS17770 -1.5 -1.2 isomerase/hydrolase compare
BWI76_RS18770 -1.5 -0.8 DNA gyrase inhibitor compare
BWI76_RS01840 -1.5 -2.3 maltose ABC transporter, ATPase component (MalK) (from data) compare
BWI76_RS14775 -1.5 -1.5 creatinine amidohydrolase compare
BWI76_RS20190 -1.5 -3.0 NADH-quinone oxidoreductase subunit A compare
BWI76_RS24180 -1.5 -1.3 hypothetical protein compare
BWI76_RS21370 -1.5 -0.9 ATP-dependent RNA helicase SrmB compare
BWI76_RS19050 -1.4 -2.5 NAD(P)-dependent oxidoreductase compare
BWI76_RS10835 -1.4 -0.9 hypothetical protein compare
BWI76_RS16275 -1.4 -1.7 fumarate hydratase FumA compare
BWI76_RS02550 -1.4 -4.2 protease modulator HflC compare
BWI76_RS13820 -1.4 -1.3 hypothetical protein compare
BWI76_RS18130 -1.4 -1.9 zinc ABC transporter substrate-binding protein compare
BWI76_RS23820 -1.4 -1.6 flavodoxin FldB compare
BWI76_RS01135 -1.4 -3.6 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS11900 -1.4 -0.9 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
BWI76_RS21945 -1.4 -1.8 LysR family transcriptional regulator compare
BWI76_RS07645 -1.4 -1.1 short-chain dehydrogenase/reductase compare
BWI76_RS26190 -1.4 -3.5 glycerol-3-phosphate dehydrogenase compare
BWI76_RS11880 -1.4 -3.6 23S rRNA pseudouridylate synthase B compare
BWI76_RS15865 -1.3 -1.5 hypothetical protein compare
BWI76_RS21450 -1.3 -1.2 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS04465 -1.3 -1.6 carbamoyl-phosphate synthase small subunit compare
BWI76_RS04470 -1.3 -5.1 carbamoyl phosphate synthase large subunit compare
BWI76_RS07675 -1.3 -2.8 DeoR family transcriptional regulator compare
BWI76_RS12870 -1.3 -1.5 putative phytanoyl-CoA dioxygenase compare
BWI76_RS00180 -1.3 -0.6 F0F1 ATP synthase subunit epsilon compare
BWI76_RS18870 -1.3 -0.9 protein NifZ compare
BWI76_RS07070 -1.3 -1.6 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS09760 -1.3 -4.4 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS01110 -1.3 -1.6 TDP-fucosamine acetyltransferase compare
BWI76_RS16400 -1.3 -1.6 pyridoxal kinase compare
BWI76_RS08615 -1.3 -2.7 galactokinase compare
BWI76_RS03880 -1.3 -2.3 homoprotocatechuate degradation operon regulator, HpaR compare
BWI76_RS04645 -1.3 -2.4 3-dehydroquinase compare
BWI76_RS14005 -1.3 -1.0 TetR family transcriptional regulator compare
BWI76_RS13400 -1.3 -2.7 GntR family transcriptional regulator compare
BWI76_RS05015 -1.3 -0.9 transcriptional regulator compare
BWI76_RS19700 -1.2 -1.4 deoxyribonuclease IV compare
BWI76_RS11685 -1.2 -4.1 Succinylarginine dihydrolase (EC 3.5.3.23) (from data) compare
BWI76_RS23915 -1.2 -1.4 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS25920 -1.2 -0.9 peptidylprolyl isomerase compare
BWI76_RS26440 -1.2 -0.7 hypothetical protein compare
BWI76_RS13770 -1.2 -1.3 alkylhydroperoxidase domain protein compare
BWI76_RS24740 -1.2 -2.0 GntR family transcriptional regulator compare
BWI76_RS23355 -1.2 -3.2 LacI family transcriptional regulator compare
BWI76_RS08765 -1.2 -1.6 8-amino-7-oxononanoate synthase compare
BWI76_RS21340 -1.2 -0.7 SoxR reducing system protein RseC compare
BWI76_RS19065 -1.2 -5.3 dTDP-glucose 4,6-dehydratase compare
BWI76_RS03910 -1.2 -2.2 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
BWI76_RS02655 -1.2 -1.0 hypothetical protein compare
BWI76_RS20350 -1.2 -3.7 amidophosphoribosyltransferase compare
BWI76_RS03105 -1.2 -0.6 myo-inosose-2 dehydratase compare
BWI76_RS26570 -1.2 -1.7 anion permease compare
BWI76_RS16360 -1.2 -0.8 electron transport complex subunit RsxB compare
BWI76_RS00880 -1.2 -2.0 membrane protein compare
BWI76_RS01195 -1.2 -1.0 membrane protein compare
BWI76_RS27475 -1.2 -4.4 regulatory protein GntR family protein compare
BWI76_RS05335 -1.1 -1.5 copper homeostasis/adhesion lipoprotein NlpE compare
BWI76_RS27170 -1.1 -3.4 MltR family transcriptional regulator compare
BWI76_RS27195 -1.1 -3.7 alpha-hydroxy-acid oxidizing enzyme compare
BWI76_RS16895 -1.1 -1.0 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS25070 -1.1 -0.7 hypothetical protein compare
BWI76_RS20640 -1.1 -2.8 cysteine synthase A compare
BWI76_RS13110 -1.1 -2.2 phenylacetic acid degradation protein compare
BWI76_RS27950 -1.1 -1.5 transcriptional regulator compare
BWI76_RS15730 -1.1 -1.5 hypothetical protein compare
BWI76_RS12145 -1.1 -1.1 hypothetical protein compare
BWI76_RS20170 -1.1 -2.4 NADH-quinone oxidoreductase subunit F compare
BWI76_RS06205 -1.1 -2.3 recombination-associated protein RdgC compare
BWI76_RS20440 -1.1 -1.7 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS25600 -1.1 -0.5 tRNA-Thr compare
BWI76_RS05680 -1.1 -2.2 LacI family transcriptional regulator compare
BWI76_RS11770 -1.1 -1.6 hypothetical protein compare
BWI76_RS06630 -1.1 -1.4 hypothetical protein compare
BWI76_RS22375 -1.1 -2.3 pectin acetylesterase compare
BWI76_RS26670 -1.1 -4.8 two-component sensor histidine kinase compare
BWI76_RS17805 -1.1 -0.7 membrane protein compare
BWI76_RS14830 -1.1 -2.8 hypothetical protein compare
BWI76_RS15230 -1.1 -4.0 4-hydroxythreonine-4-phosphate dehydrogenase compare
BWI76_RS06015 -1.1 -0.8 hypothetical protein compare
BWI76_RS17390 -1.1 -1.0 DsrE family protein compare
BWI76_RS09970 -1.1 -0.7 porin OmpA compare
BWI76_RS09150 -1.1 -2.2 DNA-binding transcriptional repressor DeoR compare
BWI76_RS14350 -1.1 -2.9 hypothetical protein compare
BWI76_RS24105 -1.1 -2.4 resistance protein compare
BWI76_RS19730 -1.1 -1.9 1-phosphofructokinase compare
BWI76_RS02050 -1.0 -1.0 CidA/LrgA family protein compare
BWI76_RS00375 -1.0 -1.4 hypothetical protein compare
BWI76_RS09110 -1.0 -1.8 glutathione ABC transporter permease GsiD compare
BWI76_RS02610 -1.0 -2.6 transcriptional regulator compare
BWI76_RS06045 -1.0 -2.2 hypothetical protein compare
BWI76_RS25380 -1.0 -1.3 oxaloacetate decarboxylase subunit beta compare
BWI76_RS21570 -1.0 -0.7 RnfH family protein compare
BWI76_RS01350 -1.0 -0.5 NAD(P)H-flavin reductase compare
BWI76_RS12925 -1.0 -2.1 efflux transporter periplasmic adaptor subunit compare
BWI76_RS06560 -1.0 -1.2 7-cyano-7-deazaguanine synthase QueC compare
BWI76_RS02940 -1.0 -3.3 RpiR family transcriptional regulator compare


Specific Phenotypes

For 7 genes in this experiment