Experiment set28IT069 for Klebsiella michiganensis M5al

Compare to:

Parafilmed volatile agar plate with Trichoderma atroviridae IMI

200 most important genes:

  gene name fitness t score description  
BWI76_RS23330 -6.0 -4.2 transcriptional regulator GalR compare
BWI76_RS00600 -5.2 -6.1 LacI family transcriptional regulator compare
BWI76_RS27275 -4.8 -8.4 hypothetical protein compare
BWI76_RS12090 -4.8 -2.1 HNH endonuclease compare
BWI76_RS12040 -4.7 -1.3 hypothetical protein compare
BWI76_RS09645 -4.4 -1.2 thioredoxin-disulfide reductase compare
BWI76_RS08395 -4.3 -1.7 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS19055 -4.2 -5.0 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS08210 -3.8 -1.5 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS26455 -3.6 -2.4 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS23265 -3.4 -2.2 hypothetical protein compare
BWI76_RS21580 -3.4 -1.6 SsrA-binding protein compare
BWI76_RS25600 -3.3 -0.9 tRNA-Thr compare
BWI76_RS26075 -3.2 -3.1 DNA adenine methylase compare
BWI76_RS26665 -3.1 -2.8 DNA-binding response regulator compare
BWI76_RS20155 -3.1 -2.1 NADH-quinone oxidoreductase subunit I compare
BWI76_RS26890 -3.1 -1.2 hypothetical protein compare
BWI76_RS07725 -3.1 -1.2 iron-enterobactin transporter permease compare
BWI76_RS27305 -3.1 -6.0 glycosyl transferase compare
BWI76_RS27280 -3.1 -7.9 polymerase compare
BWI76_RS00240 -3.0 -1.7 FMN-binding protein MioC compare
BWI76_RS04705 -3.0 -5.6 DNA-binding transcriptional regulator FruR compare
BWI76_RS00865 -2.9 -4.6 DNA-binding transcriptional regulator OxyR compare
BWI76_RS08425 -2.9 -3.9 succinyl-CoA ligase subunit beta compare
BWI76_RS08525 -2.8 -2.4 colicin transporter compare
BWI76_RS08205 -2.8 -3.2 DNA-binding transcriptional dual regulator NagC compare
BWI76_RS08535 -2.8 -1.3 translocation protein TolB compare
BWI76_RS20435 -2.8 -1.1 chorismate synthase compare
BWI76_RS08405 -2.8 -2.3 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS24900 -2.7 -1.5 DeoR family transcriptional regulator compare
BWI76_RS11155 -2.7 -1.8 penicillin-binding protein activator LpoB compare
BWI76_RS10990 -2.7 -2.6 dihydroorotase compare
BWI76_RS08430 -2.6 -5.7 succinate--CoA ligase subunit alpha compare
BWI76_RS26095 -2.6 -1.0 shikimate kinase compare
BWI76_RS06535 -2.6 -3.2 endopeptidase La compare
BWI76_RS15110 -2.6 -9.2 putative excinuclease ABC subunit A compare
BWI76_RS09730 -2.5 -1.0 pyruvate formate lyase 1-activating protein compare
BWI76_RS05015 -2.5 -2.4 transcriptional regulator compare
BWI76_RS21370 -2.5 -0.9 ATP-dependent RNA helicase SrmB compare
BWI76_RS19060 -2.4 -10.4 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS08615 -2.3 -3.2 galactokinase compare
BWI76_RS09190 -2.3 -1.6 hypothetical protein compare
BWI76_RS00180 -2.3 -0.9 F0F1 ATP synthase subunit epsilon compare
BWI76_RS24955 -2.3 -1.7 hypothetical protein compare
BWI76_RS01220 -2.2 -4.9 DNA-dependent helicase II compare
BWI76_RS16275 -2.2 -2.2 fumarate hydratase FumA compare
BWI76_RS16210 -2.2 -1.4 hypothetical protein compare
BWI76_RS24740 -2.2 -2.9 GntR family transcriptional regulator compare
BWI76_RS19050 -2.2 -4.4 NAD(P)-dependent oxidoreductase compare
BWI76_RS18125 -2.1 -3.2 murein DD-endopeptidase MepM compare
BWI76_RS01210 -2.1 -1.0 tyrosine recombinase XerC compare
BWI76_RS11680 -2.1 -4.7 succinylglutamate-semialdehyde dehydrogenase compare
BWI76_RS11965 -2.1 -3.6 orotidine-5'-phosphate decarboxylase compare
BWI76_RS19045 -2.1 -4.8 capsular polysaccharide biosynthesis protein compare
BWI76_RS11110 -2.1 -2.0 cell division protein YceG compare
BWI76_RS05450 -2.0 -1.1 ribonuclease HI compare
BWI76_RS11700 -2.0 -1.0 hypothetical protein compare
BWI76_RS14980 -2.0 -1.5 hypothetical protein compare
BWI76_RS19040 -2.0 -1.9 hypothetical protein compare
BWI76_RS08530 -2.0 -1.5 protein TolA compare
BWI76_RS09450 -1.9 -1.4 30S ribosomal protein S6--L-glutamate ligase compare
BWI76_RS23895 -1.9 -1.3 Xaa-Pro aminopeptidase compare
BWI76_RS09625 -1.9 -1.1 hypothetical protein compare
BWI76_RS01185 -1.9 -1.3 adenylate cyclase compare
BWI76_RS23830 -1.9 -3.3 hypothetical protein compare
BWI76_RS01135 -1.9 -4.0 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS11430 -1.9 -0.9 lipoprotein compare
BWI76_RS12460 -1.9 -2.3 envelope stress response membrane protein PspC compare
BWI76_RS08390 -1.9 -2.5 hypothetical protein compare
BWI76_RS11690 -1.8 -5.7 succinylglutamate desuccinylase compare
BWI76_RS04100 -1.8 -2.3 peptide chain release factor 3 compare
BWI76_RS15115 -1.8 -1.7 MFS transporter compare
BWI76_RS09615 -1.8 -2.0 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS09760 -1.8 -4.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS06290 -1.8 -1.6 ACP phosphodiesterase compare
BWI76_RS22690 -1.7 -2.9 adenylyl-sulfate kinase compare
BWI76_RS26085 -1.7 -0.8 3-dehydroquinate synthase compare
BWI76_RS20140 -1.7 -3.5 NADH-quinone oxidoreductase subunit L compare
BWI76_RS19065 -1.7 -10.5 dTDP-glucose 4,6-dehydratase compare
BWI76_RS22625 -1.7 -1.3 transcriptional regulator compare
BWI76_RS09635 -1.7 -0.9 amino acid ABC transporter ATP-binding protein compare
BWI76_RS20150 -1.7 -1.6 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS07475 -1.7 -0.8 DNA-binding transcriptional regulator RamA compare
BWI76_RS11515 -1.7 -1.1 peptide-methionine (R)-S-oxide reductase compare
BWI76_RS04645 -1.6 -3.1 3-dehydroquinase compare
BWI76_RS01120 -1.6 -4.0 O-antigen translocase compare
BWI76_RS19070 -1.6 -4.5 rhamnosyltransferase compare
BWI76_RS26460 -1.6 -2.9 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS09755 -1.6 -3.3 phosphoserine transaminase compare
BWI76_RS18780 -1.6 -1.3 D-alanyl-D-alanine carboxypeptidase compare
BWI76_RS07640 -1.6 -1.3 short chain dehydrogenase compare
BWI76_RS15760 -1.6 -1.0 hypothetical protein compare
BWI76_RS21810 -1.6 -1.2 universal stress protein compare
BWI76_RS00065 -1.6 -4.4 MurR/RpiR family transcriptional regulator compare
BWI76_RS01110 -1.6 -2.5 TDP-fucosamine acetyltransferase compare
BWI76_RS27440 -1.6 -2.2 DNA helicase RecG compare
BWI76_RS08605 -1.6 -1.9 phosphoglyceromutase compare
BWI76_RS16200 -1.5 -2.1 NAD(P) transhydrogenase subunit beta compare
BWI76_RS12485 -1.5 -2.2 TyrR family transcriptional regulator compare
BWI76_RS24100 -1.5 -2.4 YggS family pyridoxal phosphate enzyme compare
BWI76_RS22420 -1.5 -1.9 LacI family transcriptional regulator compare
BWI76_RS00355 -1.5 -1.9 DNA polymerase I compare
BWI76_RS16645 -1.5 -2.1 DeoR family transcriptional regulator compare
BWI76_RS11980 -1.5 -0.9 DeoR family transcriptional regulator compare
BWI76_RS08720 -1.5 -1.4 imidazolonepropionase compare
BWI76_RS17200 -1.5 -1.1 hypothetical protein compare
BWI76_RS01090 -1.5 -2.4 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS27170 -1.5 -4.4 MltR family transcriptional regulator compare
BWI76_RS09910 -1.5 -7.0 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS15975 -1.5 -0.8 hypothetical protein compare
BWI76_RS08385 -1.5 -1.8 citrate (Si)-synthase compare
BWI76_RS04530 -1.5 -0.9 peptidylprolyl isomerase SurA compare
BWI76_RS26470 -1.5 -2.8 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
BWI76_RS04715 -1.5 -0.8 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS05800 -1.5 -1.4 phage transcriptional activator, Ogr/delta compare
BWI76_RS01350 -1.4 -0.7 NAD(P)H-flavin reductase compare
BWI76_RS05235 -1.4 -0.7 hypothetical protein compare
BWI76_RS18605 -1.4 -1.2 oxidoreductase molybdopterin-binding protein compare
BWI76_RS19330 -1.4 -0.7 HAD family hydrolase compare
BWI76_RS18420 -1.4 -5.3 DNA (cytosine-5-)-methyltransferase compare
BWI76_RS20170 -1.4 -2.7 NADH-quinone oxidoreductase subunit F compare
BWI76_RS20270 -1.4 -4.8 hypothetical protein compare
BWI76_RS20145 -1.4 -0.9 NADH-quinone oxidoreductase subunit K compare
BWI76_RS12330 -1.4 -1.9 hypothetical protein compare
BWI76_RS11440 -1.4 -0.9 hypothetical protein compare
BWI76_RS24850 -1.4 -4.1 DeoR family transcriptional regulator compare
BWI76_RS07785 -1.4 -1.3 transcriptional regulator compare
BWI76_RS01125 -1.4 -2.2 4-alpha-L-fucosyltransferase compare
BWI76_RS19935 -1.4 -1.0 hypothetical protein compare
BWI76_RS16950 -1.4 -1.7 TetR family transcriptional regulator compare
BWI76_RS14870 -1.3 -1.6 hypothetical protein compare
BWI76_RS05120 -1.3 -4.4 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS02610 -1.3 -2.8 transcriptional regulator compare
BWI76_RS20355 -1.3 -2.5 colicin V production protein compare
BWI76_RS15230 -1.3 -2.7 4-hydroxythreonine-4-phosphate dehydrogenase compare
BWI76_RS20130 -1.3 -3.0 NADH-quinone oxidoreductase subunit N compare
BWI76_RS17070 -1.3 -2.1 phosphoenolpyruvate synthase regulatory protein compare
BWI76_RS11675 -1.3 -1.3 arginine N-succinyltransferase compare
BWI76_RS15845 -1.3 -0.8 hypothetical protein compare
BWI76_RS22240 -1.3 -4.4 transcriptional regulator compare
BWI76_RS11250 -1.3 -1.1 spermidine/putrescine ABC transporter permease PotB compare
BWI76_RS00875 -1.3 -2.7 DNA-binding transcriptional regulator FabR compare
BWI76_RS03415 -1.3 -2.8 LacI family transcriptional regulator compare
BWI76_RS04060 -1.3 -0.8 hypothetical protein compare
BWI76_RS27735 -1.3 -1.7 hypothetical protein compare
BWI76_RS15850 -1.3 -1.0 DUF1317 domain-containing protein compare
BWI76_RS06520 -1.3 -2.9 trigger factor compare
BWI76_RS14935 -1.2 -0.8 NIPSNAP family containing protein compare
BWI76_RS16360 -1.2 -0.8 electron transport complex subunit RsxB compare
BWI76_RS15225 -1.2 -2.8 DeoR family transcriptional regulator compare
BWI76_RS15195 -1.2 -1.1 DUF4186 domain-containing protein compare
BWI76_RS09725 -1.2 -1.8 MurR/RpiR family transcriptional regulator compare
BWI76_RS01540 -1.2 -1.2 thiamine biosynthesis protein ThiS compare
BWI76_RS26405 -1.2 -0.7 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS25925 -1.2 -1.8 hypothetical protein compare
BWI76_RS16815 -1.2 -1.3 periplasmic binding protein compare
BWI76_RS16505 -1.2 -3.4 MFS transporter compare
BWI76_RS05570 -1.2 -0.7 hypothetical protein compare
BWI76_RS21070 -1.2 -0.9 outer membrane protein assembly factor BamB compare
BWI76_RS27075 -1.2 -3.9 IclR family transcriptional regulator compare
BWI76_RS07865 -1.2 -1.4 methylthioribulose 1-phosphate dehydratase compare
BWI76_RS19840 -1.2 -0.7 hypothetical protein compare
BWI76_RS16805 -1.2 -1.0 basic amino acid ABC transporter substrate-binding protein compare
BWI76_RS27430 -1.2 -0.7 (p)ppGpp synthetase compare
BWI76_RS08500 -1.2 -1.7 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS17675 -1.2 -1.3 hypothetical protein compare
BWI76_RS06475 -1.2 -1.0 protoheme IX farnesyltransferase compare
BWI76_RS03920 -1.2 -1.3 N-acetyltransferase compare
BWI76_RS11015 -1.2 -1.8 hypothetical protein compare
BWI76_RS06205 -1.2 -3.0 recombination-associated protein RdgC compare
BWI76_RS23915 -1.2 -0.8 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS08520 -1.2 -1.0 colicin transporter TolQ compare
BWI76_RS01615 -1.1 -4.2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS08375 -1.1 -1.5 pyroglutamyl-peptidase I compare
BWI76_RS20190 -1.1 -3.1 NADH-quinone oxidoreductase subunit A compare
BWI76_RS03235 -1.1 -8.0 Neopullulanase (EC 3.2.1.135) (from data) compare
BWI76_RS19575 -1.1 -1.4 maleylacetoacetate isomerase compare
BWI76_RS21490 -1.1 -3.5 GGDEF domain-containing protein compare
BWI76_RS21450 -1.1 -1.2 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS09420 -1.1 -1.2 hypothetical protein compare
BWI76_RS24275 -1.1 -2.2 biopolymer transport protein ExbD compare
BWI76_RS18885 -1.1 -1.6 nitrogen fixation regulatory protein compare
BWI76_RS03040 -1.1 -1.8 leucyl aminopeptidase compare
BWI76_RS25285 -1.1 -0.6 HPr family phosphocarrier protein compare
BWI76_RS27475 -1.1 -4.2 regulatory protein GntR family protein compare
BWI76_RS14415 -1.1 -1.3 transcriptional regulator, TetR family protein compare
BWI76_RS23495 -1.1 -2.6 hypothetical protein compare
BWI76_RS24950 -1.1 -1.6 hypothetical protein compare
BWI76_RS20160 -1.1 -1.7 NADH-quinone oxidoreductase subunit H compare
BWI76_RS24070 -1.1 -1.5 16S rRNA (uracil(1498)-N(3))-methyltransferase compare
BWI76_RS08040 -1.1 -1.2 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
BWI76_RS04055 -1.1 -7.6 GGDEF domain-containing protein compare
BWI76_RS12450 -1.1 -1.3 phage shock protein PspA compare
BWI76_RS08640 -1.1 -1.1 multidrug efflux pump-associated protein, AcrZ family compare
BWI76_RS20965 -1.1 -1.7 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS02815 -1.1 -1.1 fructose-bisphosphatase class I compare
BWI76_RS17190 -1.1 -1.5 TonB system transport protein TonB compare
BWI76_RS23000 -1.1 -1.7 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
BWI76_RS08620 -1.0 -1.6 galactose-1-phosphate uridylyltransferase compare
BWI76_RS18110 -1.0 -1.8 transcriptional regulator HexR compare


Specific Phenotypes

For 9 genes in this experiment