Experiment set28IT069 for Klebsiella michiganensis M5al

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Parafilmed volatile agar plate with Trichoderma atroviridae IMI

Group: agar plate interaction
Media: LB
Culturing: Koxy_ML2a, agar plate, Aerobic, at 30 (C), (Solid)
By: Cat_Manuel on 17-Aug-21
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride

Specific Phenotypes

For 9 genes in this experiment

SEED Subsystems

Subsystem #Specific
Molybdenum cofactor biosynthesis 2
Arginine and Ornithine Degradation 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
bis(guanylyl molybdenum cofactor) biosynthesis 2 2 2
demethylmenaquinol-9 biosynthesis 1 1 1
demethylmenaquinol-8 biosynthesis I 1 1 1
bis(guanylyl tungstenpterin) cofactor biosynthesis 1 1 1
demethylmenaquinol-4 biosynthesis 1 1 1
demethylmenaquinol-6 biosynthesis I 1 1 1
guanylyl molybdenum cofactor biosynthesis 1 1 1
formate to dimethyl sulfoxide electron transfer 2 2 1
NADH to dimethyl sulfoxide electron transfer 2 2 1
menaquinol-7 biosynthesis 2 1 1
hydrogen to dimethyl sulfoxide electron transfer 2 1 1
menaquinol-10 biosynthesis 2 1 1
menaquinol-13 biosynthesis 2 1 1
menaquinol-11 biosynthesis 2 1 1
menaquinol-12 biosynthesis 2 1 1
molybdenum cofactor biosynthesis 3 3 1
bis(tungstenpterin) cofactor biosynthesis 4 1 1
L-arginine degradation II (AST pathway) 5 5 1
molybdopterin biosynthesis 6 5 1
superpathway of demethylmenaquinol-8 biosynthesis I 9 9 1
superpathway of demethylmenaquinol-6 biosynthesis I 9 8 1
superpathway of demethylmenaquinol-9 biosynthesis 9 8 1
superpathway of menaquinol-8 biosynthesis I 10 10 1
superpathway of menaquinol-9 biosynthesis 10 8 1
superpathway of menaquinol-12 biosynthesis 10 8 1
superpathway of menaquinol-6 biosynthesis 10 8 1
superpathway of menaquinol-10 biosynthesis 10 8 1
superpathway of menaquinol-7 biosynthesis 10 8 1
superpathway of menaquinol-11 biosynthesis 10 8 1
superpathway of menaquinol-13 biosynthesis 10 8 1
superpathway of chorismate metabolism 59 54 1