Experiment set28IT065 for Klebsiella michiganensis M5al

Compare to:

R2A with Vogels_fungal_media 0.8X

200 most important genes:

  gene name fitness t score description  
BWI76_RS11965 -5.3 -5.9 orotidine-5'-phosphate decarboxylase compare
BWI76_RS09645 -5.1 -2.2 thioredoxin-disulfide reductase compare
BWI76_RS19055 -4.1 -8.7 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS27385 -3.9 -8.3 orotate phosphoribosyltransferase compare
BWI76_RS10990 -3.9 -4.6 dihydroorotase compare
BWI76_RS04465 -3.8 -6.3 carbamoyl-phosphate synthase small subunit compare
BWI76_RS09910 -3.7 -15.9 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS04470 -3.7 -10.1 carbamoyl phosphate synthase large subunit compare
BWI76_RS15110 -3.7 -14.2 putative excinuclease ABC subunit A compare
BWI76_RS00400 -3.7 -2.5 glutamine synthetase compare
BWI76_RS20965 -3.3 -4.6 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS02995 -3.1 -9.8 aspartate carbamoyltransferase compare
BWI76_RS20895 -3.0 -7.5 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS01610 -3.0 -11.2 phosphoribosylamine--glycine ligase compare
BWI76_RS07070 -3.0 -4.8 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS21265 -2.9 -14.6 phosphoribosylformylglycinamidine synthase compare
BWI76_RS04510 -2.9 -2.3 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS01615 -2.8 -13.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS07065 -2.7 -6.4 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS20355 -2.5 -5.5 colicin V production protein compare
BWI76_RS20350 -2.5 -7.9 amidophosphoribosyltransferase compare
BWI76_RS23920 -2.4 -5.1 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS21370 -2.3 -2.3 ATP-dependent RNA helicase SrmB compare
BWI76_RS15115 -2.2 -3.9 MFS transporter compare
BWI76_RS19010 -2.2 -1.5 polysaccharide pyruvyl transferase yvff compare
BWI76_RS27390 -2.1 -4.2 ribonuclease PH compare
BWI76_RS00600 -2.1 -6.8 LacI family transcriptional regulator compare
BWI76_RS18165 -2.1 -2.2 NUDIX pyrophosphatase compare
BWI76_RS27430 -2.1 -1.8 (p)ppGpp synthetase compare
BWI76_RS23480 -1.9 -12.2 EAL domain-containing protein compare
BWI76_RS05450 -1.8 -1.5 ribonuclease HI compare
BWI76_RS14835 -1.8 -2.0 hypothetical protein compare
BWI76_RS00140 -1.8 -1.3 phosphate transport system regulator PhoU compare
BWI76_RS09660 -1.8 -1.2 DNA translocase FtsK compare
BWI76_RS27310 -1.7 -7.8 glycosyltransferase compare
BWI76_RS23265 -1.7 -2.7 hypothetical protein compare
BWI76_RS19060 -1.7 -8.5 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS20970 -1.6 -2.2 phosphoribosylglycinamide formyltransferase compare
BWI76_RS15850 -1.6 -2.6 DUF1317 domain-containing protein compare
BWI76_RS19050 -1.6 -5.0 NAD(P)-dependent oxidoreductase compare
BWI76_RS20380 -1.5 -1.5 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS09755 -1.5 -5.2 phosphoserine transaminase compare
BWI76_RS15660 -1.5 -1.2 hypothetical protein compare
BWI76_RS01210 -1.4 -1.3 tyrosine recombinase XerC compare
BWI76_RS14820 -1.4 -2.6 LysR family transcriptional regulator compare
BWI76_RS09530 -1.4 -1.4 hypothetical protein compare
BWI76_RS27275 -1.4 -5.8 hypothetical protein compare
BWI76_RS09655 -1.4 -4.7 leucine-responsive regulatory protein compare
BWI76_RS06910 -1.2 -1.9 transcriptional regulator compare
BWI76_RS04160 -1.2 -3.7 phosphoserine phosphatase compare
BWI76_RS27440 -1.2 -2.7 DNA helicase RecG compare
BWI76_RS26095 -1.2 -1.5 shikimate kinase compare
BWI76_RS23915 -1.2 -2.5 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS19070 -1.2 -5.0 rhamnosyltransferase compare
BWI76_RS11150 -1.2 -2.0 membrane protein compare
BWI76_RS00355 -1.2 -2.0 DNA polymerase I compare
BWI76_RS08530 -1.2 -1.9 protein TolA compare
BWI76_RS06340 -1.2 -1.3 hypothetical protein compare
BWI76_RS19040 -1.1 -3.3 hypothetical protein compare
BWI76_RS21450 -1.1 -2.0 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS15830 -1.1 -2.6 hypothetical protein compare
BWI76_RS20995 -1.1 -3.7 RNA degradosome polyphosphate kinase compare
BWI76_RS13595 -1.1 -3.4 transcriptional regulator compare
BWI76_RS16500 -1.1 -2.7 superoxide dismutase [Fe] compare
BWI76_RS26390 -1.0 -3.8 cell division protein FtsX compare
BWI76_RS01870 -1.0 -3.5 diacylglycerol kinase compare
BWI76_RS09420 -1.0 -2.3 hypothetical protein compare
BWI76_RS01220 -1.0 -4.0 DNA-dependent helicase II compare
BWI76_RS00715 -1.0 -2.0 two-component sensor histidine kinase compare
BWI76_RS08405 -1.0 -1.9 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS11435 -1.0 -1.8 hypothetical protein compare
BWI76_RS04515 -1.0 -1.4 Co2+/Mg2+ efflux protein ApaG compare
BWI76_RS21140 -1.0 -1.2 molecular chaperone HscA compare
BWI76_RS06535 -1.0 -3.7 endopeptidase La compare
BWI76_RS21475 -1.0 -5.0 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS20360 -1.0 -1.0 cell division protein DedD compare
BWI76_RS02735 -0.9 -3.8 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS08650 -0.9 -1.8 molybdate ABC transporter permease compare
BWI76_RS08720 -0.9 -1.1 imidazolonepropionase compare
BWI76_RS03010 -0.9 -5.2 ornithine carbamoyltransferase compare
BWI76_RS17565 -0.9 -1.9 hypothetical protein compare
BWI76_RS04955 -0.9 -1.1 hypoxanthine phosphoribosyltransferase compare
BWI76_RS26395 -0.9 -2.2 cell division protein FtsE compare
BWI76_RS02530 -0.9 -1.1 tRNA dimethylallyltransferase compare
BWI76_RS18885 -0.9 -2.2 nitrogen fixation regulatory protein compare
BWI76_RS25425 -0.9 -0.9 arginine repressor compare
BWI76_RS08525 -0.9 -2.1 colicin transporter compare
BWI76_RS09190 -0.9 -2.2 hypothetical protein compare
BWI76_RS01385 -0.9 -1.3 potassium transporter compare
BWI76_RS03025 -0.8 -2.5 N-acetyltransferase compare
BWI76_RS11440 -0.8 -1.2 hypothetical protein compare
BWI76_RS00180 -0.8 -1.1 F0F1 ATP synthase subunit epsilon compare
BWI76_RS20900 -0.8 -0.7 outer membrane protein assembly factor BamC compare
BWI76_RS13785 -0.8 -1.6 ABC transporter permease compare
BWI76_RS04530 -0.8 -1.0 peptidylprolyl isomerase SurA compare
BWI76_RS24100 -0.8 -2.4 YggS family pyridoxal phosphate enzyme compare
BWI76_RS18240 -0.8 -1.8 L-arabinose ABC transporter permease AraH compare
BWI76_RS04705 -0.8 -3.3 DNA-binding transcriptional regulator FruR compare
BWI76_RS23820 -0.8 -2.1 flavodoxin FldB compare
BWI76_RS25115 -0.8 -4.9 argininosuccinate synthase compare
BWI76_RS24600 -0.8 -2.4 dihydroxyacetone kinase compare
BWI76_RS26280 -0.8 -3.0 hypothetical protein compare
BWI76_RS23320 -0.8 -1.4 hypothetical protein compare
BWI76_RS09640 -0.8 -1.6 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS01800 -0.8 -2.0 glucose-6-phosphate isomerase compare
BWI76_RS04645 -0.8 -3.6 3-dehydroquinase compare
BWI76_RS11810 -0.8 -1.3 outer membrane protein OmpW compare
BWI76_RS00940 -0.8 -3.5 transcriptional regulator HdfR compare
BWI76_RS24925 -0.8 -2.0 DnaA initiator-associating protein DiaA compare
BWI76_RS07725 -0.7 -1.2 iron-enterobactin transporter permease compare
BWI76_RS06525 -0.7 -2.0 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS14625 -0.7 -1.1 protein TolA compare
BWI76_RS05075 -0.7 -0.8 type II secretion system protein GspG compare
BWI76_RS05975 -0.7 -2.0 ABC transporter ATP-binding protein compare
BWI76_RS09760 -0.7 -3.4 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS15215 -0.7 -0.8 N-acetyltransferase compare
BWI76_RS26775 -0.7 -1.8 endo-1,4-D-glucanase compare
BWI76_RS04305 -0.7 -0.7 molecular chaperone DnaJ compare
BWI76_RS24065 -0.7 -1.7 deoxyribonuclease I compare
BWI76_RS18815 -0.7 -1.4 nitrogenase molybdenum-iron protein alpha chain compare
BWI76_RS01995 -0.7 -1.1 AraC family transcriptional regulator compare
BWI76_RS21325 -0.7 -1.5 hypothetical protein compare
BWI76_RS23000 -0.7 -1.6 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
BWI76_RS12465 -0.7 -0.9 phage shock protein D compare
BWI76_RS01235 -0.7 -1.4 hypothetical protein compare
BWI76_RS04250 -0.6 -2.6 homoserine kinase compare
BWI76_RS11010 -0.6 -2.5 30S ribosomal protein S5 alanine N-acetyltransferase compare
BWI76_RS24290 -0.6 -2.3 membrane protein compare
BWI76_RS20000 -0.6 -2.1 competence/damage-inducible protein A compare
BWI76_RS01200 -0.6 -0.8 diaminopimelate epimerase compare
BWI76_RS24075 -0.6 -2.1 glutathione synthase compare
BWI76_RS13090 -0.6 -1.8 phenylacetate-CoA oxygenase subunit PaaA compare
BWI76_RS16785 -0.6 -1.9 peptidase M20 compare
BWI76_RS16030 -0.6 -2.1 malonate decarboxylase acyl carrier protein compare
BWI76_RS04240 -0.6 -1.9 thr operon leader peptide compare
BWI76_RS27875 -0.6 -0.9 membrane protein compare
BWI76_RS25905 -0.6 -1.7 hypothetical protein compare
BWI76_RS14065 -0.6 -0.9 hypothetical protein compare
BWI76_RS07640 -0.6 -1.1 short chain dehydrogenase compare
BWI76_RS04255 -0.6 -4.5 threonine synthase compare
BWI76_RS14670 -0.6 -1.1 hypothetical protein compare
BWI76_RS22265 -0.6 -2.8 NADH:flavorubredoxin oxidoreductase compare
BWI76_RS17320 -0.6 -1.4 respiratory nitrate reductase subunit gamma compare
BWI76_RS15680 -0.6 -2.0 hypothetical protein compare
BWI76_RS09150 -0.6 -1.9 DNA-binding transcriptional repressor DeoR compare
BWI76_RS15435 -0.6 -1.1 hypothetical protein compare
BWI76_RS25335 -0.6 -1.7 stringent starvation protein A compare
BWI76_RS10575 -0.6 -0.9 polar amino acid ABC transporter permease compare
BWI76_RS09970 -0.6 -0.9 porin OmpA compare
BWI76_RS13575 -0.6 -1.4 sugar binding transcriptional regulator, LacI family protein compare
BWI76_RS15315 -0.6 -1.2 DNA-binding protein compare
BWI76_RS18090 -0.6 -1.7 phosphoribosylglycinamide formyltransferase 2 compare
BWI76_RS24040 -0.6 -1.4 hypothetical protein compare
BWI76_RS04570 -0.6 -2.7 RNA polymerase-associated protein RapA compare
BWI76_RS17325 -0.6 -2.4 nitrate reductase molybdenum cofactor assembly chaperone compare
BWI76_RS06800 -0.6 -0.9 DUF2496 domain-containing protein compare
BWI76_RS15125 -0.6 -1.6 acetyltransferase compare
BWI76_RS16975 -0.6 -1.3 cysteine desufuration protein SufE compare
BWI76_RS05555 -0.6 -1.8 Crl family RNA polymerase assembly factor compare
BWI76_RS05835 -0.6 -1.0 gamma-glutamyl-phosphate reductase compare
BWI76_RS06475 -0.6 -1.3 protoheme IX farnesyltransferase compare
BWI76_RS13415 -0.6 -2.0 spermidine/putrescine ABC transporter permease compare
BWI76_RS19850 -0.6 -1.8 tRNA-Pro compare
BWI76_RS05870 -0.6 -2.3 ABC transporter compare
BWI76_RS23305 -0.6 -1.5 NADP(H)-dependent aldo-keto reductase compare
BWI76_RS13600 -0.6 -1.7 hypothetical protein compare
BWI76_RS07465 -0.6 -0.4 TetR family transcriptional regulator compare
BWI76_RS18080 -0.6 -1.6 protein YebE compare
BWI76_RS27350 -0.6 -2.0 hypothetical protein compare
BWI76_RS11040 -0.6 -2.1 ribonuclease E compare
BWI76_RS00855 -0.6 -3.2 argininosuccinate lyase compare
BWI76_RS05840 -0.6 -2.4 glutamate 5-kinase compare
BWI76_RS08535 -0.6 -1.1 translocation protein TolB compare
BWI76_RS14915 -0.5 -1.3 hypothetical protein compare
BWI76_RS06530 -0.5 -2.5 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS14020 -0.5 -1.7 aspartate aminotransferase family protein compare
BWI76_RS09805 -0.5 -1.8 hypothetical protein compare
BWI76_RS19845 -0.5 -2.9 phosphatase compare
BWI76_RS05200 -0.5 -1.0 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS09145 -0.5 -1.2 serine-type D-Ala-D-Ala carboxypeptidase compare
BWI76_RS11655 -0.5 -2.4 TVP38/TMEM64 family protein compare
BWI76_RS17895 -0.5 -2.2 PTS mannose/fructose/sorbose transporter subunit IIC compare
BWI76_RS07610 -0.5 -3.0 choline dehydrogenase compare
BWI76_RS03610 -0.5 -1.3 hypothetical protein compare
BWI76_RS26005 -0.5 -1.1 glutamine amidotransferase compare
BWI76_RS12470 -0.5 -1.0 thiosulfate sulfurtransferase PspE compare
BWI76_RS19580 -0.5 -2.0 FAA-hydrolase compare
BWI76_RS16275 -0.5 -1.4 fumarate hydratase FumA compare
BWI76_RS15845 -0.5 -0.8 hypothetical protein compare
BWI76_RS14145 -0.5 -1.7 dihydrolipoyl dehydrogenase compare
BWI76_RS04715 -0.5 -0.8 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS21345 -0.5 -1.0 sigma-E factor regulatory protein RseB compare
BWI76_RS00795 -0.5 -0.9 carboxymuconolactone decarboxylase compare
BWI76_RS16490 -0.5 -1.3 glutaredoxin compare
BWI76_RS05120 -0.5 -2.8 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS11815 -0.5 -1.1 hypothetical protein compare
BWI76_RS05335 -0.5 -1.9 copper homeostasis/adhesion lipoprotein NlpE compare
BWI76_RS21070 -0.5 -0.6 outer membrane protein assembly factor BamB compare
BWI76_RS08210 -0.5 -0.8 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS10950 -0.5 -1.6 MFS transporter compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in supernatant control:fungal media experiments

For supernatant control:fungal media Vogels_fungal_media, filtered across organisms