Experiment set28IT065 for Klebsiella michiganensis M5al

Compare to:

R2A with Vogels_fungal_media 0.8X

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS09335 +1.2 2.6 baseplate assembly protein W compare
BWI76_RS00025 +1.1 1.6 hypothetical protein compare
BWI76_RS19495 +0.9 1.8 ABC transporter, quaternary amine uptake transporter (QAT) family, ATP-binding protein compare
BWI76_RS22640 +0.9 3.1 hypothetical protein compare
BWI76_RS02580 +0.9 1.6 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS14770 +0.9 1.9 PTS IIA 2 domain protein compare
BWI76_RS24575 +0.8 2.0 hypothetical protein compare
BWI76_RS11820 +0.8 1.6 short-chain dehydrogenase/reductase SDR compare
BWI76_RS14615 +0.8 1.8 hypothetical protein compare
BWI76_RS10060 +0.8 1.9 acylphosphatase compare
BWI76_RS23325 +0.8 2.8 hypothetical protein compare
BWI76_RS17720 +0.8 0.5 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS01115 +0.8 2.7 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS12550 +0.8 0.9 hypothetical protein compare
BWI76_RS21740 +0.8 2.5 transcriptional regulator, LysR family protein compare
BWI76_RS16470 +0.8 1.9 transcriptional repressor NemR compare
BWI76_RS23195 +0.8 1.9 ethanolamine utilization protein EutP compare
BWI76_RS22095 +0.8 3.5 multidrug export protein EmrA compare
BWI76_RS00240 +0.8 1.4 FMN-binding protein MioC compare
BWI76_RS11580 +0.8 2.4 L-asparaginase 1 compare
BWI76_RS11430 +0.8 1.4 lipoprotein compare
BWI76_RS06595 +0.7 2.3 hypothetical protein compare
BWI76_RS09625 +0.7 1.6 hypothetical protein compare
BWI76_RS12155 +0.7 2.5 hypothetical protein compare
BWI76_RS19390 +0.7 2.9 LysR family transcriptional regulator compare
BWI76_RS14390 +0.7 1.5 hypothetical protein compare
BWI76_RS07985 +0.7 1.2 fluoride ion transporter CrcB compare
BWI76_RS15825 +0.7 1.3 hypothetical protein compare
BWI76_RS15785 +0.7 2.2 replication protein compare
BWI76_RS19840 +0.7 1.2 hypothetical protein compare
BWI76_RS22840 +0.7 1.7 transposase compare
BWI76_RS11935 +0.7 2.4 YmiA family putative membrane protein compare
BWI76_RS12985 +0.6 1.5 transcriptional regulator compare
BWI76_RS10530 +0.6 2.2 GntR family transcriptional regulator with compare
BWI76_RS19860 +0.6 2.5 hypothetical protein compare
BWI76_RS14265 +0.6 2.3 LysR family transcriptional regulator compare
BWI76_RS18905 +0.6 1.9 putrescine/spermidine ABC transporter compare
BWI76_RS01185 +0.6 1.6 adenylate cyclase compare
BWI76_RS18335 +0.6 4.1 DNA-binding response regulator compare
BWI76_RS07185 +0.6 1.6 hypothetical protein compare
BWI76_RS04815 +0.6 2.3 cell division protein ZapD compare
BWI76_RS11780 +0.6 2.1 2-deoxyglucose-6-phosphatase compare
BWI76_RS08380 +0.6 1.3 endonuclease VIII compare
BWI76_RS25300 +0.6 1.9 hybrid sensor histidine kinase/response regulator compare
BWI76_RS03920 +0.6 1.2 N-acetyltransferase compare
BWI76_RS18360 +0.6 0.9 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS17570 +0.6 1.3 iron-sulfur-binding protein compare
BWI76_RS17185 +0.6 2.5 fructosamine kinase family protein compare
BWI76_RS12515 +0.6 1.8 protease compare
BWI76_RS01775 +0.6 1.2 hypothetical protein compare
BWI76_RS11675 +0.6 1.1 arginine N-succinyltransferase compare
BWI76_RS16200 +0.6 1.3 NAD(P) transhydrogenase subunit beta compare
BWI76_RS22135 +0.6 1.6 transport-associated protein compare
BWI76_RS26410 +0.6 1.7 membrane protein compare
BWI76_RS11520 +0.6 1.1 hypothetical protein compare
BWI76_RS16445 +0.6 1.6 auxiliary transporter membrane fusion protein compare
BWI76_RS16525 +0.6 2.2 cyclopropane-fatty-acyl-phospholipid synthase compare
BWI76_RS15535 +0.6 2.4 hypothetical protein compare
BWI76_RS05800 +0.6 1.9 phage transcriptional activator, Ogr/delta compare
BWI76_RS12420 +0.6 1.1 peptide ABC transporter substrate-binding protein SapA compare
BWI76_RS27915 +0.5 1.8 YceK/YidQ family lipoprotein compare
BWI76_RS16640 +0.5 2.3 threonine transporter compare
BWI76_RS26635 +0.5 2.1 hypothetical protein compare
BWI76_RS20330 +0.5 1.9 histidine/lysine/arginine/ornithine ABC transporter permease HisQ compare
BWI76_RS10635 +0.5 2.7 GGDEF domain-containing protein compare
BWI76_RS09935 +0.5 3.0 paraquat-inducible membrane protein A compare
BWI76_RS16900 +0.5 1.8 4-hydroxy-2-oxovalerate aldolase compare
BWI76_RS22270 +0.5 2.0 nickel transporter compare
BWI76_RS11365 +0.5 2.5 iron ABC transporter compare
BWI76_RS21920 +0.5 2.6 amino acid ABC transporter substrate-binding protein compare
BWI76_RS17375 +0.5 1.4 nitrate ABC transporter, permease protein compare
BWI76_RS11515 +0.5 1.2 peptide-methionine (R)-S-oxide reductase compare
BWI76_RS20960 +0.5 2.2 ROK family protein compare
BWI76_RS18375 +0.5 2.1 hypothetical protein compare
BWI76_RS12980 +0.5 1.8 AraC family transcriptional regulator compare
BWI76_RS11600 +0.5 1.7 selenide, water dikinase SelD compare
BWI76_RS12045 +0.5 1.7 hypothetical protein compare
BWI76_RS06015 +0.5 1.1 hypothetical protein compare
BWI76_RS21340 +0.5 1.3 SoxR reducing system protein RseC compare
BWI76_RS10400 +0.5 1.5 hypothetical protein compare
BWI76_RS16480 +0.5 2.1 lactoylglutathione lyase compare
BWI76_RS26285 +0.5 2.5 glycerophosphodiester phosphodiesterase compare
BWI76_RS06560 +0.5 1.8 7-cyano-7-deazaguanine synthase QueC compare
BWI76_RS19560 +0.5 2.5 beta-1,4-xylanase compare
BWI76_RS25420 +0.5 2.2 malate dehydrogenase compare
BWI76_RS02815 +0.5 1.6 fructose-bisphosphatase class I compare
BWI76_RS19375 +0.5 1.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS14105 +0.5 2.0 NADH:ubiquinone reductase (Na(+)-transporting) subunit E compare
BWI76_RS16260 +0.5 1.3 two-component sensor histidine kinase compare
BWI76_RS07510 +0.5 1.5 hypothetical protein compare
BWI76_RS08970 +0.5 1.6 glutamine ABC transporter permease GlnP compare
BWI76_RS20340 +0.5 1.3 histidine ABC transporter substrate-binding protein HisJ compare
BWI76_RS12860 +0.5 1.4 hypothetical protein compare
BWI76_RS08280 +0.5 1.5 acyl-CoA esterase compare
BWI76_RS06370 +0.5 2.9 phosphatidylglycerophosphatase A compare
BWI76_RS12305 +0.5 2.3 hypothetical protein compare
BWI76_RS11060 +0.5 1.6 septum formation inhibitor Maf compare
BWI76_RS15865 +0.5 1.4 hypothetical protein compare
BWI76_RS13645 +0.5 1.8 N-hydroxyarylamine O-acetyltransferase compare
BWI76_RS16705 +0.5 2.4 glucose dehydrogenase compare
BWI76_RS15950 +0.5 0.4 dethiobiotin synthase compare
BWI76_RS07380 +0.5 1.2 hypothetical protein compare
BWI76_RS06625 +0.5 2.8 acyl-CoA thioesterase II compare
BWI76_RS14290 +0.5 2.8 AAA family ATPase compare
BWI76_RS09455 +0.5 1.7 YbjN domain-containing protein compare
BWI76_RS12070 +0.5 0.8 hypothetical protein compare
BWI76_RS08395 +0.5 1.5 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS13380 +0.5 1.4 hypothetical protein compare
BWI76_RS08510 +0.5 1.3 cyd operon protein YbgE compare
BWI76_RS14735 +0.5 1.6 type 11 methyltransferase compare
BWI76_RS12825 +0.5 1.5 hypothetical protein compare
BWI76_RS20720 +0.5 1.0 hypothetical protein compare
BWI76_RS20985 +0.5 3.6 glycosyl hydrolase family protein compare
BWI76_RS18125 +0.5 0.9 murein DD-endopeptidase MepM compare
BWI76_RS25220 +0.5 1.2 outer membrane lipid asymmetry maintenance protein MlaD compare
BWI76_RS09450 +0.5 1.0 30S ribosomal protein S6--L-glutamate ligase compare
BWI76_RS20945 +0.5 2.6 uracil phosphoribosyltransferase compare
BWI76_RS03790 +0.5 2.0 hypothetical protein compare
BWI76_RS06680 +0.5 0.8 hypothetical protein compare
BWI76_RS09275 +0.5 2.1 major capsid protein compare
BWI76_RS19330 +0.5 0.7 HAD family hydrolase compare
BWI76_RS01100 +0.5 2.5 dTDP-glucose 4,6-dehydratase compare
BWI76_RS12290 +0.5 1.6 hypothetical protein compare
BWI76_RS23555 +0.5 2.3 type 1 major fimbrial subunit precursor compare
BWI76_RS24270 +0.5 1.5 membrane protein compare
BWI76_RS15015 +0.5 1.0 DUF2132 domain-containing protein compare
BWI76_RS24960 +0.4 1.6 N-acetyltransferase compare
BWI76_RS22470 +0.4 1.3 transporter permease compare
BWI76_RS16230 +0.4 1.7 dihydromonapterin reductase compare
BWI76_RS24485 +0.4 1.1 bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase compare
BWI76_RS02180 +0.4 0.6 hypothetical protein compare
BWI76_RS18565 +0.4 1.6 pemk protein compare
BWI76_RS07940 +0.4 2.4 alkyl hydroperoxide reductase subunit C compare
BWI76_RS12215 +0.4 2.1 HNH endonuclease compare
BWI76_RS14980 +0.4 1.1 hypothetical protein compare
BWI76_RS20805 +0.4 1.9 phosphate acetyltransferase compare
BWI76_RS09730 +0.4 0.4 pyruvate formate lyase 1-activating protein compare
BWI76_RS17315 +0.4 1.3 EamA family transporter compare
BWI76_RS08110 +0.4 1.3 glutamate/aspartate ABC transporter substrate-binding protein compare
BWI76_RS06550 +0.4 2.6 competence protein ComEA compare
BWI76_RS06915 +0.4 2.0 membrane protein compare
BWI76_RS23020 +0.4 0.8 cobalamin biosynthesis protein CbiQ compare
BWI76_RS22440 +0.4 2.1 iron ABC transporter permease compare
BWI76_RS12040 +0.4 0.8 hypothetical protein compare
BWI76_RS16195 +0.4 0.5 hypothetical protein compare
BWI76_RS07955 +0.4 1.8 nucleoside diphosphate kinase regulator compare
BWI76_RS07865 +0.4 1.0 methylthioribulose 1-phosphate dehydratase compare
BWI76_RS09505 +0.4 1.9 arginine transporter permease subunit ArtM compare
BWI76_RS16205 +0.4 2.0 NAD(P) transhydrogenase subunit alpha compare
BWI76_RS27425 +0.4 1.0 DNA-directed RNA polymerase subunit omega compare
BWI76_RS27445 +0.4 2.0 fructose-bisphosphatase class II compare
BWI76_RS11240 +0.4 1.8 spermidine/putrescine ABC transporter substrate-binding protein PotD compare
BWI76_RS14190 +0.4 2.5 DNA-binding protein compare
BWI76_RS22130 +0.4 1.1 fructose-1-phosphate/6-phosphogluconate phosphatase compare
BWI76_RS04140 +0.4 2.6 phosphopentomutase compare
BWI76_RS17935 +0.4 1.2 DUF2627 domain-containing protein compare
BWI76_RS01565 +0.4 1.1 NADH pyrophosphatase compare
BWI76_RS26830 +0.4 1.9 endoglucanase compare
BWI76_RS12885 +0.4 1.3 hypothetical protein compare
BWI76_RS05655 +0.4 0.7 hypothetical protein compare
BWI76_RS07995 +0.4 1.6 twin-arginine translocase subunit TatA compare
BWI76_RS08580 +0.4 1.2 quinolinate synthetase compare
BWI76_RS00370 +0.4 1.3 GTPase-activating protein compare
BWI76_RS16235 +0.4 1.5 membrane protein compare
BWI76_RS12610 +0.4 1.6 LysR family transcriptional regulator compare
BWI76_RS07595 +0.4 0.8 putative oxidoreductase compare
BWI76_RS07075 +0.4 1.2 hypothetical protein compare
BWI76_RS20760 +0.4 2.3 ethanolamine ammonia-lyase small subunit compare
BWI76_RS06570 +0.4 1.6 thiamin pyrimidine pyrophosphate hydrolase compare
BWI76_RS07540 +0.4 1.9 dipeptide ABC transporter ATP-binding protein DppD compare
BWI76_RS21710 +0.4 1.4 nitroreductase compare
BWI76_RS06400 +0.4 1.2 oxidative-stress-resistance chaperone compare
BWI76_RS06185 +0.4 2.1 shikimate kinase II compare
BWI76_RS20230 +0.4 0.5 hypothetical protein compare
BWI76_RS23515 +0.4 1.1 antibiotic biosynthesis monooxygenase compare
BWI76_RS21015 +0.4 1.5 LysR family transcriptional regulator compare
BWI76_RS09500 +0.4 1.5 arginine ABC transporter substrate-binding protein compare
BWI76_RS22630 +0.4 1.4 LysR family transcriptional regulator compare
BWI76_RS15230 +0.4 1.8 4-hydroxythreonine-4-phosphate dehydrogenase compare
BWI76_RS13545 +0.4 0.7 N-acetyltransferase compare
BWI76_RS08760 +0.4 1.9 biotin synthase compare
BWI76_RS21490 +0.4 2.6 GGDEF domain-containing protein compare
BWI76_RS14305 +0.4 1.7 metallophosphoesterase compare
BWI76_RS07450 +0.4 2.0 transcriptional regulator compare
BWI76_RS06665 +0.4 1.1 membrane protein compare
BWI76_RS15150 +0.4 1.3 outer membrane efflux protein compare
BWI76_RS23760 +0.4 1.0 tRNA-Gly compare
BWI76_RS00335 +0.4 1.6 hypothetical protein compare
BWI76_RS21565 +0.4 0.6 outer membrane protein assembly factor BamE compare
BWI76_RS08965 +0.4 1.5 glutamine ABC transporter ATP-binding protein compare
BWI76_RS13895 +0.4 1.5 LysR family transcriptional regulator compare
BWI76_RS06440 +0.4 1.5 AP endonuclease compare
BWI76_RS15640 +0.4 1.8 hypothetical protein compare
BWI76_RS15685 +0.4 1.1 hypothetical protein compare
BWI76_RS15130 +0.4 1.5 hypothetical protein compare
BWI76_RS06410 +0.4 1.9 YajQ family cyclic di-GMP-binding protein compare
BWI76_RS26130 +0.4 1.7 ADP compounds hydrolase NudE compare
BWI76_RS19980 +0.4 1.7 2-keto-3-deoxy-L-rhamnonate aldolase compare
BWI76_RS23470 +0.4 3.0 hypothetical protein compare
BWI76_RS18780 +0.4 0.6 D-alanyl-D-alanine carboxypeptidase compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in supernatant control:fungal media experiments

For supernatant control:fungal media Vogels_fungal_media, filtered across organisms