Experiment set28IT062 for Klebsiella michiganensis M5al

Compare to:

R2A with Vogels_fungal_media 0.2X

200 most important genes:

  gene name fitness t score description  
BWI76_RS09645 -5.2 -2.2 thioredoxin-disulfide reductase compare
BWI76_RS04510 -4.7 -3.2 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS05120 -4.1 -7.5 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS07070 -3.8 -4.5 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS15110 -3.8 -15.9 putative excinuclease ABC subunit A compare
BWI76_RS00400 -3.6 -2.4 glutamine synthetase compare
BWI76_RS07065 -3.3 -8.9 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS01615 -3.2 -9.0 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS21265 -3.1 -13.7 phosphoribosylformylglycinamidine synthase compare
BWI76_RS20895 -3.1 -6.2 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS26085 -3.1 -2.1 3-dehydroquinate synthase compare
BWI76_RS20350 -3.0 -6.7 amidophosphoribosyltransferase compare
BWI76_RS20355 -2.9 -5.6 colicin V production protein compare
BWI76_RS04530 -2.9 -1.9 peptidylprolyl isomerase SurA compare
BWI76_RS19050 -2.7 -7.9 NAD(P)-dependent oxidoreductase compare
BWI76_RS05200 -2.7 -1.8 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS19055 -2.7 -7.0 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS27385 -2.7 -7.4 orotate phosphoribosyltransferase compare
BWI76_RS15115 -2.7 -4.7 MFS transporter compare
BWI76_RS20965 -2.6 -5.9 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS19040 -2.5 -4.4 hypothetical protein compare
BWI76_RS04470 -2.5 -8.0 carbamoyl phosphate synthase large subunit compare
BWI76_RS26095 -2.5 -1.9 shikimate kinase compare
BWI76_RS01610 -2.5 -8.4 phosphoribosylamine--glycine ligase compare
BWI76_RS23265 -2.4 -3.9 hypothetical protein compare
BWI76_RS09755 -2.4 -6.9 phosphoserine transaminase compare
BWI76_RS19010 -2.3 -1.6 polysaccharide pyruvyl transferase yvff compare
BWI76_RS19060 -2.3 -10.1 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS27390 -2.3 -4.7 ribonuclease PH compare
BWI76_RS25425 -2.2 -2.1 arginine repressor compare
BWI76_RS23920 -2.2 -3.1 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS09910 -2.2 -13.3 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS00180 -2.0 -1.5 F0F1 ATP synthase subunit epsilon compare
BWI76_RS17975 -2.0 -5.0 tail-specific protease compare
BWI76_RS09660 -2.0 -1.3 DNA translocase FtsK compare
BWI76_RS11965 -2.0 -4.8 orotidine-5'-phosphate decarboxylase compare
BWI76_RS05015 -1.9 -2.6 transcriptional regulator compare
BWI76_RS21075 -1.9 -2.5 membrane protein compare
BWI76_RS08525 -1.9 -2.8 colicin transporter compare
BWI76_RS10990 -1.9 -2.6 dihydroorotase compare
BWI76_RS04160 -1.9 -6.1 phosphoserine phosphatase compare
BWI76_RS25070 -1.8 -2.0 hypothetical protein compare
BWI76_RS25065 -1.8 -3.4 polyribonucleotide nucleotidyltransferase compare
BWI76_RS25060 -1.8 -4.2 lipoprotein NlpI compare
BWI76_RS20435 -1.8 -1.7 chorismate synthase compare
BWI76_RS00140 -1.7 -1.2 phosphate transport system regulator PhoU compare
BWI76_RS04525 -1.7 -2.9 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS04465 -1.7 -3.4 carbamoyl-phosphate synthase small subunit compare
BWI76_RS05260 -1.6 -2.1 chaperone compare
BWI76_RS20650 -1.6 -1.8 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS02995 -1.5 -7.9 aspartate carbamoyltransferase compare
BWI76_RS00965 -1.5 -1.6 acetolactate synthase 2 small subunit compare
BWI76_RS00850 -1.5 -6.4 acetylglutamate kinase compare
BWI76_RS19070 -1.5 -6.9 rhamnosyltransferase compare
BWI76_RS25645 -1.5 -6.1 shikimate dehydrogenase compare
BWI76_RS20995 -1.5 -3.4 RNA degradosome polyphosphate kinase compare
BWI76_RS21165 -1.5 -2.5 Fe-S cluster assembly transcriptional regulator IscR compare
BWI76_RS03010 -1.5 -6.1 ornithine carbamoyltransferase compare
BWI76_RS27430 -1.5 -1.3 (p)ppGpp synthetase compare
BWI76_RS11155 -1.5 -2.1 penicillin-binding protein activator LpoB compare
BWI76_RS10935 -1.5 -6.2 glucan biosynthesis glucosyltransferase H compare
BWI76_RS24100 -1.4 -3.2 YggS family pyridoxal phosphate enzyme compare
BWI76_RS21370 -1.4 -1.9 ATP-dependent RNA helicase SrmB compare
BWI76_RS26775 -1.4 -4.1 endo-1,4-D-glucanase compare
BWI76_RS08520 -1.4 -1.3 colicin transporter TolQ compare
BWI76_RS02530 -1.4 -1.3 tRNA dimethylallyltransferase compare
BWI76_RS04645 -1.4 -3.9 3-dehydroquinase compare
BWI76_RS16965 -1.3 -2.8 murein lipoprotein compare
BWI76_RS25115 -1.3 -7.1 argininosuccinate synthase compare
BWI76_RS11860 -1.3 -6.5 anthranilate synthase component I compare
BWI76_RS00845 -1.3 -5.1 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS16360 -1.3 -1.7 electron transport complex subunit RsxB compare
BWI76_RS00390 -1.3 -4.9 two-component system sensor histidine kinase NtrB compare
BWI76_RS09760 -1.3 -5.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS15835 -1.2 -1.4 hypothetical protein compare
BWI76_RS00855 -1.2 -4.9 argininosuccinate lyase compare
BWI76_RS00805 -1.2 -5.4 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS23360 -1.2 -2.3 diaminopimelate decarboxylase compare
BWI76_RS00600 -1.2 -5.4 LacI family transcriptional regulator compare
BWI76_RS26570 -1.2 -2.2 anion permease compare
BWI76_RS00710 -1.2 -2.1 6-N-hydroxylaminopurine resistance protein compare
BWI76_RS11840 -1.2 -2.1 tryptophan synthase subunit alpha compare
BWI76_RS13595 -1.2 -3.6 transcriptional regulator compare
BWI76_RS25335 -1.2 -2.2 stringent starvation protein A compare
BWI76_RS02410 -1.2 -0.8 EF-P beta-lysylation protein EpmB compare
BWI76_RS04250 -1.2 -3.8 homoserine kinase compare
BWI76_RS21475 -1.2 -5.6 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS23480 -1.1 -7.8 EAL domain-containing protein compare
BWI76_RS26395 -1.1 -1.6 cell division protein FtsE compare
BWI76_RS08535 -1.1 -1.3 translocation protein TolB compare
BWI76_RS15830 -1.1 -2.3 hypothetical protein compare
BWI76_RS01385 -1.1 -1.6 potassium transporter compare
BWI76_RS12870 -1.1 -3.0 putative phytanoyl-CoA dioxygenase compare
BWI76_RS22755 -1.1 -3.9 phosphoadenosine phosphosulfate reductase compare
BWI76_RS20380 -1.1 -1.1 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS01210 -1.1 -1.0 tyrosine recombinase XerC compare
BWI76_RS21565 -1.0 -1.0 outer membrane protein assembly factor BamE compare
BWI76_RS09655 -1.0 -3.6 leucine-responsive regulatory protein compare
BWI76_RS10930 -1.0 -6.4 glucan biosynthesis protein G compare
BWI76_RS05810 -1.0 -1.3 hypothetical protein compare
BWI76_RS16485 -1.0 -1.5 ribonuclease T compare
BWI76_RS19035 -1.0 -2.4 dTDP-rhamnosyl transferase compare
BWI76_RS24945 -1.0 -1.2 glutamine amidotransferase compare
BWI76_RS17190 -1.0 -1.7 TonB system transport protein TonB compare
BWI76_RS20970 -1.0 -1.5 phosphoribosylglycinamide formyltransferase compare
BWI76_RS18925 -1.0 -3.3 histidinol dehydrogenase compare
BWI76_RS12670 -1.0 -2.0 DNA polymerase V subunit UmuD compare
BWI76_RS16275 -1.0 -1.7 fumarate hydratase FumA compare
BWI76_RS07740 -1.0 -1.3 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS20440 -1.0 -3.0 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS00875 -1.0 -4.9 DNA-binding transcriptional regulator FabR compare
BWI76_RS01870 -1.0 -4.1 diacylglycerol kinase compare
BWI76_RS25960 -1.0 -2.4 NUDIX hydrolase compare
BWI76_RS17980 -1.0 -2.1 RNA chaperone ProQ compare
BWI76_RS19900 -1.0 -2.7 FAD:protein FMN transferase compare
BWI76_RS07465 -1.0 -1.1 TetR family transcriptional regulator compare
BWI76_RS09440 -0.9 -1.9 hypothetical protein compare
BWI76_RS08385 -0.9 -2.5 citrate (Si)-synthase compare
BWI76_RS02255 -0.9 -3.9 chaperone-modulator protein CbpM compare
BWI76_RS21450 -0.9 -1.6 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS11855 -0.9 -3.9 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS19845 -0.9 -3.8 phosphatase compare
BWI76_RS27275 -0.9 -3.5 hypothetical protein compare
BWI76_RS26075 -0.9 -1.6 DNA adenine methylase compare
BWI76_RS11850 -0.9 -3.9 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS26200 -0.9 -3.9 starch synthase compare
BWI76_RS19840 -0.9 -1.0 hypothetical protein compare
BWI76_RS01630 -0.9 -1.0 16S ribosomal RNA compare
BWI76_RS13480 -0.9 -1.6 XRE family transcriptional regulator compare
BWI76_RS01190 -0.9 -1.4 iron donor protein CyaY compare
BWI76_RS25320 -0.9 -5.0 glutamate synthase compare
BWI76_RS04715 -0.9 -1.0 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS06735 -0.9 -1.7 50S ribosomal protein L31 compare
BWI76_RS21580 -0.9 -1.2 SsrA-binding protein compare
BWI76_RS20715 -0.9 -1.7 RpoE-regulated lipoprotein compare
BWI76_RS23250 -0.9 -1.9 hypothetical protein compare
BWI76_RS23455 -0.9 -2.0 Na(+)-translocating NADH-quinone reductase subunit E compare
BWI76_RS06475 -0.8 -1.6 protoheme IX farnesyltransferase compare
BWI76_RS17805 -0.8 -1.2 membrane protein compare
BWI76_RS18950 -0.8 -1.8 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS22855 -0.8 -2.7 hypothetical protein compare
BWI76_RS16375 -0.8 -2.8 electron transport complex subunit G compare
BWI76_RS01275 -0.8 -4.4 LysR family transcriptional regulator compare
BWI76_RS18755 -0.8 -1.2 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS26620 -0.8 -0.8 Fe-S biogenesis protein NfuA compare
BWI76_RS25220 -0.8 -1.1 outer membrane lipid asymmetry maintenance protein MlaD compare
BWI76_RS26760 -0.8 -3.0 C4-dicarboxylate transport protein DctA (from data) compare
BWI76_RS25315 -0.8 -5.2 glutamate synthase large subunit compare
BWI76_RS04245 -0.8 -5.2 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS08025 -0.8 -3.3 septal ring lytic transglycosylase RlpA compare
BWI76_RS27310 -0.8 -4.1 glycosyltransferase compare
BWI76_RS00970 -0.8 -3.0 branched chain amino acid aminotransferase compare
BWI76_RS23220 -0.8 -3.6 amino-acid N-acetyltransferase compare
BWI76_RS04255 -0.8 -4.6 threonine synthase compare
BWI76_RS06295 -0.8 -2.8 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
BWI76_RS14805 -0.8 -2.0 hypothetical protein compare
BWI76_RS05840 -0.8 -2.9 glutamate 5-kinase compare
BWI76_RS26405 -0.8 -0.7 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS27440 -0.8 -1.9 DNA helicase RecG compare
BWI76_RS09580 -0.8 -5.7 surface protein compare
BWI76_RS18165 -0.8 -1.2 NUDIX pyrophosphatase compare
BWI76_RS20225 -0.8 -1.8 hypothetical protein compare
BWI76_RS09530 -0.8 -0.9 hypothetical protein compare
BWI76_RS21140 -0.8 -1.0 molecular chaperone HscA compare
BWI76_RS12680 -0.8 -1.6 oxidoreductase compare
BWI76_RS03040 -0.8 -2.4 leucyl aminopeptidase compare
BWI76_RS01280 -0.8 -4.9 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
BWI76_RS16210 -0.8 -1.6 hypothetical protein compare
BWI76_RS01220 -0.8 -3.0 DNA-dependent helicase II compare
BWI76_RS14670 -0.8 -1.8 hypothetical protein compare
BWI76_RS08605 -0.7 -1.8 phosphoglyceromutase compare
BWI76_RS15660 -0.7 -0.8 hypothetical protein compare
BWI76_RS24040 -0.7 -1.9 hypothetical protein compare
BWI76_RS25545 -0.7 -2.2 hypothetical protein compare
BWI76_RS22760 -0.7 -3.1 sulfite reductase subunit beta compare
BWI76_RS08375 -0.7 -2.0 pyroglutamyl-peptidase I compare
BWI76_RS04705 -0.7 -3.9 DNA-binding transcriptional regulator FruR compare
BWI76_RS05450 -0.7 -1.2 ribonuclease HI compare
BWI76_RS21310 -0.7 -0.8 DNA repair protein RecO compare
BWI76_RS16015 -0.7 -1.1 pheromone autoinducer 2 transporter compare
BWI76_RS25280 -0.7 -1.4 RNase adaptor protein RapZ compare
BWI76_RS18935 -0.7 -3.8 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS00385 -0.7 -3.7 nitrogen assimilation regulatory protein compare
BWI76_RS08210 -0.7 -1.3 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS02735 -0.7 -2.6 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS05790 -0.7 -1.2 phage DNA-binding protein compare
BWI76_RS02610 -0.7 -2.7 transcriptional regulator compare
BWI76_RS26945 -0.7 -2.5 hypothetical protein compare
BWI76_RS05160 -0.7 -1.7 hypothetical protein compare
BWI76_RS24290 -0.7 -1.8 membrane protein compare
BWI76_RS04270 -0.7 -2.1 transaldolase compare
BWI76_RS16240 -0.7 -1.9 anti-adapter protein IraM compare
BWI76_RS06780 -0.7 -2.2 MexE family multidrug efflux RND transporter periplasmic adaptor subunit compare
BWI76_RS22050 -0.7 -1.7 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI compare
BWI76_RS25600 -0.7 -0.6 tRNA-Thr compare
BWI76_RS08530 -0.7 -1.0 protein TolA compare
BWI76_RS09615 -0.7 -1.4 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS16955 -0.7 -1.0 hypothetical protein compare
BWI76_RS19045 -0.7 -3.0 capsular polysaccharide biosynthesis protein compare
BWI76_RS10500 -0.7 -1.7 flavoprotein monooxygenase compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in supernatant control:fungal media experiments

For supernatant control:fungal media Vogels_fungal_media, filtered across organisms