Experiment set28IT062 for Klebsiella michiganensis M5al

Compare to:

R2A with Vogels_fungal_media 0.2X

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS01325 +1.3 3.5 twin-arginine translocase subunit TatB compare
BWI76_RS13560 +1.1 1.8 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS21460 +1.0 2.0 translation inhibitor protein RaiA compare
BWI76_RS12550 +1.0 1.7 hypothetical protein compare
BWI76_RS04955 +0.9 1.7 hypoxanthine phosphoribosyltransferase compare
BWI76_RS03595 +0.9 2.0 ethanolamine utilization protein EutM compare
BWI76_RS11820 +0.9 1.8 short-chain dehydrogenase/reductase SDR compare
BWI76_RS10745 +0.9 1.6 hypothetical protein compare
BWI76_RS27865 +0.9 2.3 hypothetical protein compare
BWI76_RS01885 +0.9 1.6 CsbD family protein compare
BWI76_RS11580 +0.9 2.9 L-asparaginase 1 compare
BWI76_RS00715 +0.9 3.1 two-component sensor histidine kinase compare
BWI76_RS22840 +0.9 2.2 transposase compare
BWI76_RS07955 +0.9 1.2 nucleoside diphosphate kinase regulator compare
BWI76_RS02680 +0.9 2.1 EamA family transporter compare
BWI76_RS13980 +0.9 1.1 hypothetical protein compare
BWI76_RS10060 +0.8 1.9 acylphosphatase compare
BWI76_RS22805 +0.8 4.1 GTP diphosphokinase compare
BWI76_RS08315 +0.8 2.2 K+-transporting ATPase subunit B compare
BWI76_RS27475 +0.8 5.8 regulatory protein GntR family protein compare
BWI76_RS09625 +0.8 1.7 hypothetical protein compare
BWI76_RS06400 +0.8 1.8 oxidative-stress-resistance chaperone compare
BWI76_RS20270 +0.8 2.9 hypothetical protein compare
BWI76_RS09450 +0.8 2.3 30S ribosomal protein S6--L-glutamate ligase compare
BWI76_RS18745 +0.7 1.8 adenosylhomocysteinase compare
BWI76_RS24885 +0.7 1.2 PTS galactitol transporter subunit IIB compare
BWI76_RS12045 +0.7 1.8 hypothetical protein compare
BWI76_RS09635 +0.7 1.5 amino acid ABC transporter ATP-binding protein compare
BWI76_RS04060 +0.7 1.7 hypothetical protein compare
BWI76_RS18575 +0.7 1.4 transcriptional regulator compare
BWI76_RS16515 +0.7 1.8 LysR family transcriptional regulator compare
BWI76_RS09470 +0.7 1.7 putrescine ABC transporter permease compare
BWI76_RS17110 +0.7 1.7 vitamin B12 ABC transporter permease BtuC compare
BWI76_RS08380 +0.7 1.0 endonuclease VIII compare
BWI76_RS10735 +0.7 2.2 hypothetical protein compare
BWI76_RS05880 +0.7 1.3 AraC-type DNA-binding domain-containing protein compare
BWI76_RS07765 +0.7 2.3 thioesterase compare
BWI76_RS14435 +0.7 1.8 glutamine ABC transporter ATP-binding protein compare
BWI76_RS16920 +0.7 1.8 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS16675 +0.7 1.8 ABC transporter compare
BWI76_RS03080 +0.7 2.5 (Fe-S)-cluster assembly protein compare
BWI76_RS04975 +0.6 2.2 PTS fructose subfamily transporter subunit IIA compare
BWI76_RS06335 +0.6 1.8 nucleoside-specific channel-forming protein Tsx compare
BWI76_RS06520 +0.6 3.1 trigger factor compare
BWI76_RS09640 +0.6 1.1 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS15360 +0.6 2.0 hypothetical protein compare
BWI76_RS00335 +0.6 2.5 hypothetical protein compare
BWI76_RS21340 +0.6 1.6 SoxR reducing system protein RseC compare
BWI76_RS00720 +0.6 1.8 DNA-binding response regulator compare
BWI76_RS27830 +0.6 3.0 type I toxin-antitoxin system toxin TisB compare
BWI76_RS09680 +0.6 3.3 dimethyl sulfoxide reductase subunit A compare
BWI76_RS26280 +0.6 3.0 hypothetical protein compare
BWI76_RS17530 +0.6 1.3 hypothetical protein compare
BWI76_RS26245 +0.6 1.8 transcriptional regulator compare
BWI76_RS08615 +0.6 2.8 galactokinase compare
BWI76_RS03700 +0.6 1.8 hypothetical protein compare
BWI76_RS17675 +0.6 0.9 hypothetical protein compare
BWI76_RS11250 +0.6 1.6 spermidine/putrescine ABC transporter permease PotB compare
BWI76_RS16035 +0.6 2.1 biotin-independent malonate decarboxylase subunit beta compare
BWI76_RS09490 +0.6 2.2 DNA-binding response regulator compare
BWI76_RS05075 +0.6 0.8 type II secretion system protein GspG compare
BWI76_RS09395 +0.6 2.2 late control gene D protein compare
BWI76_RS02820 +0.6 3.3 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
BWI76_RS13895 +0.6 1.7 LysR family transcriptional regulator compare
BWI76_RS09905 +0.6 2.1 FMN reductase (NADPH) compare
BWI76_RS18125 +0.6 2.5 murein DD-endopeptidase MepM compare
BWI76_RS23015 +0.6 1.3 cobalt transporter ATP-binding subunit compare
BWI76_RS23355 +0.6 2.0 LacI family transcriptional regulator compare
BWI76_RS24110 +0.6 1.6 YggU family protein compare
BWI76_RS04900 +0.6 1.2 DUF2950 domain-containing protein compare
BWI76_RS13245 +0.6 1.3 DNA-damage-inducible protein I compare
BWI76_RS07470 +0.6 2.1 MBL fold metallo-hydrolase compare
BWI76_RS07780 +0.6 1.1 hypothetical protein compare
BWI76_RS11360 +0.6 1.6 L-asparaginase compare
BWI76_RS13135 +0.6 2.9 3-oxoadipyl-CoA thiolase compare
BWI76_RS26755 +0.5 3.3 peptidase M16 compare
BWI76_RS23580 +0.5 1.3 hypothetical protein compare
BWI76_RS23825 +0.5 4.3 hypothetical protein compare
BWI76_RS17720 +0.5 0.3 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS15950 +0.5 1.4 dethiobiotin synthase compare
BWI76_RS20390 +0.5 0.9 erythronate-4-phosphate dehydrogenase compare
BWI76_RS08980 +0.5 1.0 DNA starvation/stationary phase protection protein compare
BWI76_RS23895 +0.5 0.9 Xaa-Pro aminopeptidase compare
BWI76_RS08335 +0.5 2.3 deoxyribodipyrimidine photo-lyase compare
BWI76_RS04815 +0.5 1.7 cell division protein ZapD compare
BWI76_RS22640 +0.5 1.3 hypothetical protein compare
BWI76_RS22095 +0.5 1.2 multidrug export protein EmrA compare
BWI76_RS16665 +0.5 2.2 ABC transporter permease compare
BWI76_RS18775 +0.5 2.3 hypothetical protein compare
BWI76_RS16705 +0.5 2.2 glucose dehydrogenase compare
BWI76_RS16910 +0.5 1.1 2-keto-4-pentenoate hydratase compare
BWI76_RS09130 +0.5 1.6 biofilm formation regulatory protein BssR compare
BWI76_RS20325 +0.5 1.4 histidine/lysine/arginine/ornithine ABC transporter permease HisM compare
BWI76_RS20090 +0.5 2.3 ribonuclease Z compare
BWI76_RS05485 +0.5 3.1 transpeptidase compare
BWI76_RS13275 +0.5 1.6 hypothetical protein compare
BWI76_RS07860 +0.5 1.9 cytosine permease compare
BWI76_RS26285 +0.5 2.0 glycerophosphodiester phosphodiesterase compare
BWI76_RS17965 +0.5 1.5 MFS transporter compare
BWI76_RS19305 +0.5 1.7 ABC transporter ATP-binding protein compare
BWI76_RS20675 +0.5 1.9 GMP synthase compare
BWI76_RS23030 +0.5 1.8 cobalamin biosynthesis protein CbiM compare
BWI76_RS15865 +0.5 1.9 hypothetical protein compare
BWI76_RS03605 +0.5 0.9 BMC domain-containing protein compare
BWI76_RS22300 +0.5 1.5 hydrogenase 3 maturation endopeptidase HyCI compare
BWI76_RS24850 +0.5 2.4 DeoR family transcriptional regulator compare
BWI76_RS17045 +0.5 1.1 hypothetical protein compare
BWI76_RS13025 +0.5 1.9 histidine phosphatase family protein compare
BWI76_RS09255 +0.5 1.1 hypothetical protein compare
BWI76_RS15130 +0.5 2.2 hypothetical protein compare
BWI76_RS23830 +0.5 2.9 hypothetical protein compare
BWI76_RS16290 +0.5 1.7 Mal regulon transcriptional regulator MalI compare
BWI76_RS10055 +0.5 1.9 AraC family transcriptional regulator compare
BWI76_RS24485 +0.5 1.1 bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase compare
BWI76_RS04605 +0.5 0.9 thiamine ABC transporter ATP-binding protein compare
BWI76_RS16130 +0.5 2.0 3-carboxy-cis,cis-muconate cycloisomerase compare
BWI76_RS12185 +0.5 0.8 hypothetical protein compare
BWI76_RS24260 +0.5 1.2 hypothetical protein compare
BWI76_RS11525 +0.5 1.1 HNH endonuclease compare
BWI76_RS00660 +0.5 1.9 ABC transporter compare
BWI76_RS16300 +0.5 1.9 bifunctional beta-cystathionase/maltose regulon regulatory protein compare
BWI76_RS26140 +0.5 2.2 GMP/IMP nucleotidase compare
BWI76_RS20805 +0.5 1.6 phosphate acetyltransferase compare
BWI76_RS18605 +0.5 0.6 oxidoreductase molybdopterin-binding protein compare
BWI76_RS20230 +0.5 0.6 hypothetical protein compare
BWI76_RS09015 +0.5 1.8 aldo/keto reductase compare
BWI76_RS03135 +0.5 2.7 sugar ABC transporter permease compare
BWI76_RS17795 +0.5 2.0 ribonuclease D compare
BWI76_RS09465 +0.5 2.1 polyamine ABC transporter ATP-binding protein compare
BWI76_RS16800 +0.4 1.7 amino acid ABC transporter permease compare
BWI76_RS14770 +0.4 0.9 PTS IIA 2 domain protein compare
BWI76_RS16735 +0.4 1.3 cold-shock protein compare
BWI76_RS06405 +0.4 1.3 2-dehydropantoate 2-reductase compare
BWI76_RS19805 +0.4 1.9 Bcr/CflA family multidrug efflux MFS transporter compare
BWI76_RS06440 +0.4 1.7 AP endonuclease compare
BWI76_RS26745 +0.4 1.8 antibiotic biosynthesis monooxygenase compare
BWI76_RS07710 +0.4 2.0 invasin-like protein compare
BWI76_RS18060 +0.4 1.7 hypothetical protein compare
BWI76_RS10870 +0.4 1.6 nicotinamidase compare
BWI76_RS07435 +0.4 1.2 LacI family transcriptional regulator compare
BWI76_RS11665 +0.4 1.7 exodeoxyribonuclease III compare
BWI76_RS21345 +0.4 0.7 sigma-E factor regulatory protein RseB compare
BWI76_RS18385 +0.4 0.8 hypothetical protein compare
BWI76_RS10550 +0.4 2.2 AtzE family amidohydrolase compare
BWI76_RS15570 +0.4 2.9 phage antirepressor Ant compare
BWI76_RS13250 +0.4 0.8 cytochrome b561 compare
BWI76_RS10595 +0.4 2.0 allantoate amidohydrolase compare
BWI76_RS02365 +0.4 2.0 hypothetical protein compare
BWI76_RS10670 +0.4 1.9 PTS fructose transporter subunit IIC compare
BWI76_RS17185 +0.4 1.9 fructosamine kinase family protein compare
BWI76_RS26940 +0.4 2.7 transcriptional regulator compare
BWI76_RS16905 +0.4 1.2 acetaldehyde dehydrogenase (acetylating) compare
BWI76_RS19200 +0.4 1.5 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS13050 +0.4 1.2 transcriptional regulator compare
BWI76_RS13855 +0.4 1.3 peroxiredoxin compare
BWI76_RS02150 +0.4 1.7 allulose-6-phosphate 3-epimerase compare
BWI76_RS02310 +0.4 1.7 transcriptional regulator compare
BWI76_RS11705 +0.4 1.4 hypothetical protein compare
BWI76_RS00950 +0.4 1.6 ATP-dependent protease compare
BWI76_RS16510 +0.4 1.1 transcriptional repressor PurR compare
BWI76_RS09725 +0.4 1.3 MurR/RpiR family transcriptional regulator compare
BWI76_RS02970 +0.4 2.4 trehalose operon repressor compare
BWI76_RS24925 +0.4 0.8 DnaA initiator-associating protein DiaA compare
BWI76_RS00815 +0.4 2.9 glycerol dehydrogenase compare
BWI76_RS23120 +0.4 1.6 propanediol dehydratase medium subunit compare
BWI76_RS11750 +0.4 1.6 chitooligosaccharide deacetylase compare
BWI76_RS18535 +0.4 1.5 alpha/beta hydrolase compare
BWI76_RS00760 +0.4 1.5 cell division protein FtsN compare
BWI76_RS11865 +0.4 1.6 phosphatase compare
BWI76_RS13150 +0.4 1.3 carnitine operon protein CaiE compare
BWI76_RS18425 +0.4 1.1 phosphohydrolase compare
BWI76_RS27550 +0.4 2.0 hypothetical protein compare
BWI76_RS14975 +0.4 1.2 glyoxalase-like domain protein compare
BWI76_RS02855 +0.4 1.2 cytochrome B562 compare
BWI76_RS08805 +0.4 2.0 gluconeogenesis factor compare
BWI76_RS22090 +0.4 1.2 transcriptional regulator compare
BWI76_RS07595 +0.4 0.8 putative oxidoreductase compare
BWI76_RS24935 +0.4 2.3 hypothetical protein compare
BWI76_RS18225 +0.4 1.8 universal stress protein C compare
BWI76_RS22435 +0.4 1.7 iron ABC transporter permease AfeC compare
BWI76_RS16200 +0.4 0.8 NAD(P) transhydrogenase subunit beta compare
BWI76_RS19975 +0.4 2.0 sn-glycerol-3-phosphate dehydrogenase subunit C compare
BWI76_RS25300 +0.4 1.1 hybrid sensor histidine kinase/response regulator compare
BWI76_RS14615 +0.4 0.8 hypothetical protein compare
BWI76_RS10035 +0.4 0.6 hypothetical protein compare
BWI76_RS23905 +0.4 2.7 Z-ring-associated protein compare
BWI76_RS20055 +0.4 2.1 2-succinylbenzoate-CoA ligase compare
BWI76_RS01805 +0.4 2.1 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase compare
BWI76_RS22350 +0.4 1.4 hydrogenase nickel incorporation protein HypB compare
BWI76_RS24645 +0.4 2.5 autoinducer 2 ABC transporter substrate-binding protein compare
BWI76_RS26410 +0.4 1.0 membrane protein compare
BWI76_RS19395 +0.4 2.1 adenine deaminase compare
BWI76_RS20730 +0.4 0.9 hypothetical protein compare
BWI76_RS03610 +0.4 1.7 hypothetical protein compare
BWI76_RS11780 +0.4 1.1 2-deoxyglucose-6-phosphatase compare
BWI76_RS05800 +0.4 1.2 phage transcriptional activator, Ogr/delta compare
BWI76_RS09340 +0.4 2.1 baseplate assembly protein J compare
BWI76_RS21995 +0.4 2.1 transcriptional regulator compare
BWI76_RS04540 +0.4 2.3 molecular chaperone DjlA compare
BWI76_RS13070 +0.4 1.8 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in supernatant control:fungal media experiments

For supernatant control:fungal media Vogels_fungal_media, filtered across organisms