Experiment set28IT060 for Klebsiella michiganensis M5al

Compare to:

R2A with Vogels_fungal_media 0.2X

200 most important genes:

  gene name fitness t score description  
BWI76_RS23265 -5.7 -3.4 hypothetical protein compare
BWI76_RS09645 -5.1 -2.3 thioredoxin-disulfide reductase compare
BWI76_RS20895 -4.7 -5.2 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS04465 -4.1 -4.8 carbamoyl-phosphate synthase small subunit compare
BWI76_RS04470 -3.8 -9.4 carbamoyl phosphate synthase large subunit compare
BWI76_RS15110 -3.8 -14.4 putative excinuclease ABC subunit A compare
BWI76_RS02995 -3.7 -9.5 aspartate carbamoyltransferase compare
BWI76_RS05120 -3.6 -8.4 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS01615 -3.4 -8.3 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS00400 -3.4 -2.3 glutamine synthetase compare
BWI76_RS00600 -3.3 -5.2 LacI family transcriptional regulator compare
BWI76_RS04510 -3.2 -2.7 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS09910 -3.1 -14.9 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS27385 -3.1 -5.8 orotate phosphoribosyltransferase compare
BWI76_RS15115 -3.0 -3.0 MFS transporter compare
BWI76_RS20350 -3.0 -6.8 amidophosphoribosyltransferase compare
BWI76_RS10990 -2.9 -3.4 dihydroorotase compare
BWI76_RS26085 -2.9 -2.0 3-dehydroquinate synthase compare
BWI76_RS21265 -2.9 -14.5 phosphoribosylformylglycinamidine synthase compare
BWI76_RS11965 -2.8 -4.6 orotidine-5'-phosphate decarboxylase compare
BWI76_RS01610 -2.8 -6.9 phosphoribosylamine--glycine ligase compare
BWI76_RS27310 -2.8 -11.4 glycosyltransferase compare
BWI76_RS01775 -2.7 -2.1 hypothetical protein compare
BWI76_RS27430 -2.7 -1.6 (p)ppGpp synthetase compare
BWI76_RS19050 -2.6 -7.4 NAD(P)-dependent oxidoreductase compare
BWI76_RS20965 -2.5 -3.2 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS19055 -2.4 -5.5 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS20355 -2.4 -3.3 colicin V production protein compare
BWI76_RS07065 -2.3 -7.3 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS26440 -2.3 -2.0 hypothetical protein compare
BWI76_RS19040 -2.2 -3.9 hypothetical protein compare
BWI76_RS19010 -2.2 -1.5 polysaccharide pyruvyl transferase yvff compare
BWI76_RS11155 -2.2 -2.4 penicillin-binding protein activator LpoB compare
BWI76_RS23480 -2.2 -13.6 EAL domain-containing protein compare
BWI76_RS27390 -2.2 -3.1 ribonuclease PH compare
BWI76_RS01210 -2.2 -1.7 tyrosine recombinase XerC compare
BWI76_RS05200 -2.1 -2.0 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS04525 -2.1 -1.7 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS07070 -2.1 -5.8 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS21370 -2.0 -2.0 ATP-dependent RNA helicase SrmB compare
BWI76_RS01870 -2.0 -5.7 diacylglycerol kinase compare
BWI76_RS23885 -2.0 -1.7 2-octaprenylphenol hydroxylase compare
BWI76_RS23895 -1.9 -2.2 Xaa-Pro aminopeptidase compare
BWI76_RS09660 -1.9 -1.3 DNA translocase FtsK compare
BWI76_RS08520 -1.9 -2.5 colicin transporter TolQ compare
BWI76_RS19060 -1.9 -9.2 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS09755 -1.8 -5.4 phosphoserine transaminase compare
BWI76_RS25060 -1.8 -3.2 lipoprotein NlpI compare
BWI76_RS19770 -1.8 -2.1 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS00345 -1.7 -2.9 protein disulfide oxidoreductase DsbA compare
BWI76_RS02725 -1.7 -1.4 HxlR family transcriptional regulator compare
BWI76_RS21140 -1.6 -2.1 molecular chaperone HscA compare
BWI76_RS08210 -1.6 -2.4 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS25920 -1.6 -2.2 peptidylprolyl isomerase compare
BWI76_RS20970 -1.4 -1.9 phosphoribosylglycinamide formyltransferase compare
BWI76_RS26390 -1.4 -3.6 cell division protein FtsX compare
BWI76_RS20995 -1.4 -3.1 RNA degradosome polyphosphate kinase compare
BWI76_RS25065 -1.4 -2.7 polyribonucleotide nucleotidyltransferase compare
BWI76_RS00140 -1.4 -1.1 phosphate transport system regulator PhoU compare
BWI76_RS13595 -1.4 -3.7 transcriptional regulator compare
BWI76_RS21980 -1.4 -2.4 hypothetical protein compare
BWI76_RS26620 -1.4 -1.2 Fe-S biogenesis protein NfuA compare
BWI76_RS16485 -1.4 -1.5 ribonuclease T compare
BWI76_RS16965 -1.3 -3.6 murein lipoprotein compare
BWI76_RS16355 -1.3 -2.3 electron transport complex subunit A compare
BWI76_RS19070 -1.3 -6.3 rhamnosyltransferase compare
BWI76_RS04530 -1.3 -1.5 peptidylprolyl isomerase SurA compare
BWI76_RS26455 -1.3 -2.7 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS06525 -1.2 -3.1 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS24955 -1.2 -1.8 hypothetical protein compare
BWI76_RS08385 -1.2 -2.7 citrate (Si)-synthase compare
BWI76_RS15660 -1.2 -1.1 hypothetical protein compare
BWI76_RS02735 -1.2 -3.0 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS27440 -1.2 -2.3 DNA helicase RecG compare
BWI76_RS19035 -1.2 -2.3 dTDP-rhamnosyl transferase compare
BWI76_RS17975 -1.1 -2.4 tail-specific protease compare
BWI76_RS21475 -1.1 -4.4 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS19845 -1.1 -4.3 phosphatase compare
BWI76_RS21450 -1.1 -1.8 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS26570 -1.1 -2.3 anion permease compare
BWI76_RS00355 -1.1 -1.3 DNA polymerase I compare
BWI76_RS23915 -1.1 -2.3 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS23320 -1.1 -1.6 hypothetical protein compare
BWI76_RS15195 -1.1 -2.1 DUF4186 domain-containing protein compare
BWI76_RS04160 -1.1 -4.0 phosphoserine phosphatase compare
BWI76_RS03105 -1.1 -1.2 myo-inosose-2 dehydratase compare
BWI76_RS15920 -1.0 -1.6 hypothetical protein compare
BWI76_RS15015 -1.0 -1.6 DUF2132 domain-containing protein compare
BWI76_RS26775 -1.0 -2.9 endo-1,4-D-glucanase compare
BWI76_RS26075 -1.0 -1.8 DNA adenine methylase compare
BWI76_RS06765 -1.0 -2.0 transcriptional regulator compare
BWI76_RS25870 -1.0 -1.3 elongation factor Tu compare
BWI76_RS10935 -1.0 -2.2 glucan biosynthesis glucosyltransferase H compare
BWI76_RS11835 -1.0 -1.6 putative regulatory protein MarR compare
BWI76_RS07465 -1.0 -1.2 TetR family transcriptional regulator compare
BWI76_RS20380 -1.0 -1.0 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS04705 -1.0 -3.2 DNA-binding transcriptional regulator FruR compare
BWI76_RS01115 -1.0 -2.1 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS08530 -1.0 -1.6 protein TolA compare
BWI76_RS12090 -1.0 -1.5 HNH endonuclease compare
BWI76_RS15035 -0.9 -1.7 metal ABC transporter permease compare
BWI76_RS21075 -0.9 -1.0 membrane protein compare
BWI76_RS02530 -0.9 -1.0 tRNA dimethylallyltransferase compare
BWI76_RS09760 -0.9 -3.7 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS05235 -0.9 -1.0 hypothetical protein compare
BWI76_RS15835 -0.9 -1.1 hypothetical protein compare
BWI76_RS19330 -0.9 -1.0 HAD family hydrolase compare
BWI76_RS06530 -0.9 -4.1 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS22755 -0.9 -3.1 phosphoadenosine phosphosulfate reductase compare
BWI76_RS01330 -0.9 -2.2 twin-arginine translocase subunit TatC compare
BWI76_RS04645 -0.9 -3.0 3-dehydroquinase compare
BWI76_RS26200 -0.9 -4.8 starch synthase compare
BWI76_RS15975 -0.9 -1.1 hypothetical protein compare
BWI76_RS09635 -0.9 -1.0 amino acid ABC transporter ATP-binding protein compare
BWI76_RS09655 -0.9 -2.4 leucine-responsive regulatory protein compare
BWI76_RS04270 -0.9 -3.1 transaldolase compare
BWI76_RS10575 -0.9 -1.2 polar amino acid ABC transporter permease compare
BWI76_RS17970 -0.9 -2.3 zinc metalloprotease HtpX compare
BWI76_RS01800 -0.9 -2.0 glucose-6-phosphate isomerase compare
BWI76_RS11150 -0.9 -1.7 membrane protein compare
BWI76_RS20650 -0.9 -1.1 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS11255 -0.8 -1.5 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS03665 -0.8 -1.4 ABC transporter ATP-binding protein compare
BWI76_RS01090 -0.8 -3.1 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS20795 -0.8 -1.1 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS26460 -0.8 -2.4 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS22765 -0.8 -3.7 sulfite reductase subunit alpha compare
BWI76_RS11235 -0.8 -1.1 hypothetical protein compare
BWI76_RS26665 -0.8 -2.1 DNA-binding response regulator compare
BWI76_RS27620 -0.8 -2.2 hypothetical protein compare
BWI76_RS25335 -0.8 -2.1 stringent starvation protein A compare
BWI76_RS19465 -0.8 -1.4 hypothetical protein compare
BWI76_RS25645 -0.8 -3.1 shikimate dehydrogenase compare
BWI76_RS03010 -0.8 -5.5 ornithine carbamoyltransferase compare
BWI76_RS22690 -0.8 -1.8 adenylyl-sulfate kinase compare
BWI76_RS01220 -0.8 -3.0 DNA-dependent helicase II compare
BWI76_RS08525 -0.8 -1.1 colicin transporter compare
BWI76_RS00180 -0.8 -0.9 F0F1 ATP synthase subunit epsilon compare
BWI76_RS06475 -0.8 -1.5 protoheme IX farnesyltransferase compare
BWI76_RS01135 -0.8 -2.5 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS21560 -0.8 -1.9 DNA repair protein RecN compare
BWI76_RS15435 -0.8 -1.4 hypothetical protein compare
BWI76_RS05355 -0.8 -2.4 methionine ABC transporter substrate-binding protein MetQ compare
BWI76_RS15715 -0.8 -1.8 putative ninG protein compare
BWI76_RS22085 -0.8 -2.9 L-valine transporter subunit YgaH compare
BWI76_RS10930 -0.8 -4.1 glucan biosynthesis protein G compare
BWI76_RS11110 -0.8 -2.3 cell division protein YceG compare
BWI76_RS09315 -0.8 -1.6 hypothetical protein compare
BWI76_RS13090 -0.7 -1.9 phenylacetate-CoA oxygenase subunit PaaA compare
BWI76_RS02180 -0.7 -1.1 hypothetical protein compare
BWI76_RS26590 -0.7 -2.4 transcriptional regulator compare
BWI76_RS20715 -0.7 -1.5 RpoE-regulated lipoprotein compare
BWI76_RS15940 -0.7 -2.2 DMSO reductase maturation protein DsmD compare
BWI76_RS01095 -0.7 -1.6 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS07785 -0.7 -1.5 transcriptional regulator compare
BWI76_RS27235 -0.7 -3.4 murein hydrolase activator EnvC compare
BWI76_RS18140 -0.7 -1.2 zinc ABC transporter permease compare
BWI76_RS22760 -0.7 -4.1 sulfite reductase subunit beta compare
BWI76_RS04245 -0.7 -4.7 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS08020 -0.7 -2.7 serine-type D-Ala-D-Ala carboxypeptidase compare
BWI76_RS12465 -0.7 -1.0 phage shock protein D compare
BWI76_RS22950 -0.7 -1.3 membrane protein compare
BWI76_RS15350 -0.7 -1.0 hypothetical protein compare
BWI76_RS20465 -0.7 -2.9 hypothetical protein compare
BWI76_RS17525 -0.7 -1.6 XshC-Cox1-family protein compare
BWI76_RS10365 -0.7 -3.0 class IV aminotransferase compare
BWI76_RS18815 -0.7 -2.5 nitrogenase molybdenum-iron protein alpha chain compare
BWI76_RS17195 -0.7 -1.9 hypothetical protein compare
BWI76_RS13770 -0.7 -2.0 alkylhydroperoxidase domain protein compare
BWI76_RS01085 -0.7 -2.7 polysaccharide chain length modulation protein compare
BWI76_RS11285 -0.7 -1.4 transcriptional regulator compare
BWI76_RS26395 -0.7 -2.4 cell division protein FtsE compare
BWI76_RS17190 -0.7 -1.3 TonB system transport protein TonB compare
BWI76_RS26670 -0.7 -3.9 two-component sensor histidine kinase compare
BWI76_RS27305 -0.7 -2.7 glycosyl transferase compare
BWI76_RS11780 -0.7 -1.9 2-deoxyglucose-6-phosphatase compare
BWI76_RS17980 -0.7 -2.2 RNA chaperone ProQ compare
BWI76_RS06535 -0.7 -2.8 endopeptidase La compare
BWI76_RS02445 -0.7 -2.2 fumarate reductase subunit C compare
BWI76_RS04250 -0.7 -2.8 homoserine kinase compare
BWI76_RS20430 -0.7 -1.6 penicillin-insensitive murein endopeptidase compare
BWI76_RS25485 -0.7 -1.1 septum formation protein Maf compare
BWI76_RS24100 -0.7 -1.6 YggS family pyridoxal phosphate enzyme compare
BWI76_RS23810 -0.7 -2.0 bifunctional protein-disulfide isomerase/oxidoreductase DsbC compare
BWI76_RS09650 -0.7 -2.9 hypothetical protein compare
BWI76_RS22645 -0.7 -2.2 RNA polymerase sigma factor RpoS compare
BWI76_RS14805 -0.7 -2.3 hypothetical protein compare
BWI76_RS20390 -0.7 -1.3 erythronate-4-phosphate dehydrogenase compare
BWI76_RS09690 -0.7 -1.5 dimethyl sulfoxide reductase compare
BWI76_RS16675 -0.7 -0.8 ABC transporter compare
BWI76_RS18240 -0.7 -1.5 L-arabinose ABC transporter permease AraH compare
BWI76_RS26000 -0.7 -3.5 aspartate aminotransferase family protein compare
BWI76_RS04570 -0.7 -3.2 RNA polymerase-associated protein RapA compare
BWI76_RS23920 -0.6 -2.0 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS25115 -0.6 -2.6 argininosuccinate synthase compare
BWI76_RS08825 -0.6 -1.6 cyclic pyranopterin monophosphate synthase MoaC compare
BWI76_RS09440 -0.6 -1.8 hypothetical protein compare
BWI76_RS18000 -0.6 -1.6 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF compare
BWI76_RS01080 -0.6 -3.8 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS17805 -0.6 -1.0 membrane protein compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in supernatant control:fungal media experiments

For supernatant control:fungal media Vogels_fungal_media, filtered across organisms