Experiment set28IT059 for Klebsiella michiganensis M5al

Compare to:

Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X

200 most important genes:

  gene name fitness t score description  
BWI76_RS26395 -7.7 -4.4 cell division protein FtsE compare
BWI76_RS26390 -7.5 -5.1 cell division protein FtsX compare
BWI76_RS26670 -6.2 -12.0 two-component sensor histidine kinase compare
BWI76_RS27235 -6.2 -10.2 murein hydrolase activator EnvC compare
BWI76_RS26665 -5.9 -4.0 DNA-binding response regulator compare
BWI76_RS26455 -5.8 -3.0 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS26460 -5.7 -6.6 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS16250 -5.7 -5.8 DNA-binding response regulator compare
BWI76_RS27305 -5.6 -7.6 glycosyl transferase compare
BWI76_RS00720 -5.5 -3.8 DNA-binding response regulator compare
BWI76_RS01325 -5.3 -3.3 twin-arginine translocase subunit TatB compare
BWI76_RS17190 -5.2 -3.7 TonB system transport protein TonB compare
BWI76_RS08520 -5.2 -3.3 colicin transporter TolQ compare
BWI76_RS04465 -5.0 -6.1 carbamoyl-phosphate synthase small subunit compare
BWI76_RS09645 -5.0 -1.8 thioredoxin-disulfide reductase compare
BWI76_RS19840 -4.7 -1.7 hypothetical protein compare
BWI76_RS16260 -4.5 -2.3 two-component sensor histidine kinase compare
BWI76_RS23265 -4.4 -3.9 hypothetical protein compare
BWI76_RS05120 -4.3 -8.6 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS27290 -4.2 -7.0 hypothetical protein compare
BWI76_RS04305 -4.0 -1.5 molecular chaperone DnaJ compare
BWI76_RS01330 -4.0 -4.7 twin-arginine translocase subunit TatC compare
BWI76_RS16965 -4.0 -2.8 murein lipoprotein compare
BWI76_RS04470 -3.9 -11.4 carbamoyl phosphate synthase large subunit compare
BWI76_RS01870 -3.9 -4.1 diacylglycerol kinase compare
BWI76_RS06765 -3.8 -5.6 transcriptional regulator compare
BWI76_RS23480 -3.8 -13.9 EAL domain-containing protein compare
BWI76_RS26440 -3.8 -2.0 hypothetical protein compare
BWI76_RS05015 -3.7 -3.1 transcriptional regulator compare
BWI76_RS07465 -3.7 -1.6 TetR family transcriptional regulator compare
BWI76_RS26570 -3.5 -3.4 anion permease compare
BWI76_RS11275 -3.5 -10.0 sensor protein PhoQ compare
BWI76_RS24280 -3.4 -7.5 biopolymer transporter ExbB compare
BWI76_RS15110 -3.3 -14.5 putative excinuclease ABC subunit A compare
BWI76_RS15975 -3.3 -1.7 hypothetical protein compare
BWI76_RS10935 -3.2 -7.1 glucan biosynthesis glucosyltransferase H compare
BWI76_RS09970 -3.1 -1.4 porin OmpA compare
BWI76_RS08530 -3.1 -2.7 protein TolA compare
BWI76_RS10990 -3.0 -2.5 dihydroorotase compare
BWI76_RS19050 -3.0 -7.1 NAD(P)-dependent oxidoreductase compare
BWI76_RS27165 -3.0 -5.9 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS04715 -2.9 -1.4 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS19040 -2.9 -3.4 hypothetical protein compare
BWI76_RS26075 -2.9 -4.0 DNA adenine methylase compare
BWI76_RS24275 -2.8 -3.8 biopolymer transport protein ExbD compare
BWI76_RS19055 -2.8 -6.5 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS18710 -2.8 -13.2 GGDEF-domain containing protein compare
BWI76_RS26775 -2.7 -6.6 endo-1,4-D-glucanase compare
BWI76_RS24025 -2.7 -4.7 agmatinase compare
BWI76_RS04510 -2.7 -1.9 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS09825 -2.7 -8.1 envelope biogenesis factor ElyC compare
BWI76_RS05140 -2.6 -5.9 Fe3+-hydroxamate ABC transporter permease FhuB compare
BWI76_RS05200 -2.6 -1.8 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS22650 -2.6 -8.6 lipoprotein NlpD compare
BWI76_RS06770 -2.5 -9.6 Hha toxicity attenuator compare
BWI76_RS18715 -2.5 -7.9 hypothetical protein compare
BWI76_RS15825 -2.5 -1.6 hypothetical protein compare
BWI76_RS15115 -2.4 -3.7 MFS transporter compare
BWI76_RS11155 -2.4 -2.3 penicillin-binding protein activator LpoB compare
BWI76_RS19770 -2.4 -2.4 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS01210 -2.3 -1.9 tyrosine recombinase XerC compare
BWI76_RS02995 -2.3 -4.9 aspartate carbamoyltransferase compare
BWI76_RS00400 -2.3 -1.9 glutamine synthetase compare
BWI76_RS07985 -2.3 -1.4 fluoride ion transporter CrcB compare
BWI76_RS09030 -2.2 -7.7 transpeptidase compare
BWI76_RS25425 -2.2 -1.9 arginine repressor compare
BWI76_RS20380 -2.2 -1.4 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS08535 -2.2 -2.4 translocation protein TolB compare
BWI76_RS05350 -2.2 -9.6 Rcs stress response system protein RcsF compare
BWI76_RS19910 -2.2 -8.2 phosphotransferase RcsD compare
BWI76_RS26620 -2.1 -1.3 Fe-S biogenesis protein NfuA compare
BWI76_RS00600 -2.1 -5.4 LacI family transcriptional regulator compare
BWI76_RS19010 -2.1 -1.4 polysaccharide pyruvyl transferase yvff compare
BWI76_RS21580 -2.1 -2.2 SsrA-binding protein compare
BWI76_RS19060 -2.1 -9.2 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS10930 -2.1 -6.5 glucan biosynthesis protein G compare
BWI76_RS00965 -2.0 -1.6 acetolactate synthase 2 small subunit compare
BWI76_RS19845 -2.0 -3.6 phosphatase compare
BWI76_RS08525 -1.9 -3.2 colicin transporter compare
BWI76_RS11110 -1.9 -2.9 cell division protein YceG compare
BWI76_RS20145 -1.9 -1.8 NADH-quinone oxidoreductase subunit K compare
BWI76_RS25475 -1.9 -7.8 TIGR02099 family protein compare
BWI76_RS06525 -1.9 -3.7 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS19920 -1.8 -6.0 hybrid sensor histidine kinase/response regulator compare
BWI76_RS06680 -1.8 -1.3 hypothetical protein compare
BWI76_RS05135 -1.8 -3.5 iron-hydroxamate transporter substrate-binding subunit compare
BWI76_RS01135 -1.8 -4.0 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS17785 -1.8 -5.1 septum site-determining protein MinD compare
BWI76_RS17780 -1.8 -6.9 septum formation inhibitor compare
BWI76_RS12090 -1.8 -2.0 HNH endonuclease compare
BWI76_RS25160 -1.8 -2.1 transcription elongation factor GreA compare
BWI76_RS01125 -1.8 -4.0 4-alpha-L-fucosyltransferase compare
BWI76_RS05125 -1.7 -6.4 ferrichrome porin FhuA compare
BWI76_RS14065 -1.7 -1.6 hypothetical protein compare
BWI76_RS05130 -1.7 -6.1 iron-hydroxamate transporter ATP-binding subunit compare
BWI76_RS09660 -1.7 -1.1 DNA translocase FtsK compare
BWI76_RS11135 -1.7 -4.8 ferric-rhodotorulic acid/ferric-coprogen receptor FhuE compare
BWI76_RS20355 -1.7 -3.0 colicin V production protein compare
BWI76_RS17390 -1.7 -2.9 DsrE family protein compare
BWI76_RS24885 -1.7 -1.7 PTS galactitol transporter subunit IIB compare
BWI76_RS09910 -1.7 -10.2 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS16715 -1.7 -8.4 hypothetical protein compare
BWI76_RS27310 -1.6 -8.1 glycosyltransferase compare
BWI76_RS21450 -1.6 -1.6 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS01610 -1.6 -6.9 phosphoribosylamine--glycine ligase compare
BWI76_RS01220 -1.6 -5.1 DNA-dependent helicase II compare
BWI76_RS06475 -1.6 -1.8 protoheme IX farnesyltransferase compare
BWI76_RS25000 -1.6 -2.0 malonate decarboxylase acyl carrier protein compare
BWI76_RS00875 -1.6 -5.0 DNA-binding transcriptional regulator FabR compare
BWI76_RS08500 -1.6 -2.5 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS15850 -1.5 -2.0 DUF1317 domain-containing protein compare
BWI76_RS21265 -1.5 -9.1 phosphoribosylformylglycinamidine synthase compare
BWI76_RS01890 -1.5 -2.8 transcriptional regulator Zur compare
BWI76_RS17720 -1.5 -0.5 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS19070 -1.5 -5.4 rhamnosyltransferase compare
BWI76_RS13755 -1.5 -2.1 hypothetical protein compare
BWI76_RS22690 -1.5 -3.2 adenylyl-sulfate kinase compare
BWI76_RS00180 -1.5 -1.3 F0F1 ATP synthase subunit epsilon compare
BWI76_RS23485 -1.5 -6.8 hypothetical protein compare
BWI76_RS01095 -1.4 -1.8 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS06790 -1.4 -8.5 mechanosensitive channel MscK compare
BWI76_RS00355 -1.4 -1.7 DNA polymerase I compare
BWI76_RS01110 -1.4 -3.6 TDP-fucosamine acetyltransferase compare
BWI76_RS01615 -1.4 -6.7 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS06800 -1.4 -1.4 DUF2496 domain-containing protein compare
BWI76_RS11965 -1.4 -2.0 orotidine-5'-phosphate decarboxylase compare
BWI76_RS20795 -1.4 -1.3 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS20965 -1.4 -2.5 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS20650 -1.4 -1.5 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS06530 -1.4 -3.4 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS24470 -1.4 -5.2 hypothetical protein compare
BWI76_RS14435 -1.3 -1.3 glutamine ABC transporter ATP-binding protein compare
BWI76_RS22090 -1.3 -1.7 transcriptional regulator compare
BWI76_RS01090 -1.3 -4.4 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS16955 -1.3 -1.4 hypothetical protein compare
BWI76_RS02530 -1.3 -1.3 tRNA dimethylallyltransferase compare
BWI76_RS08020 -1.3 -3.8 serine-type D-Ala-D-Ala carboxypeptidase compare
BWI76_RS24340 -1.3 -4.6 two-component sensor histidine kinase compare
BWI76_RS26200 -1.3 -3.4 starch synthase compare
BWI76_RS27440 -1.3 -2.8 DNA helicase RecG compare
BWI76_RS20360 -1.3 -1.0 cell division protein DedD compare
BWI76_RS15680 -1.3 -2.1 hypothetical protein compare
BWI76_RS26890 -1.3 -1.5 hypothetical protein compare
BWI76_RS27505 -1.3 -3.4 septal ring assembly protein ZapB compare
BWI76_RS09520 -1.3 -1.3 arginine ABC transporter ATP-binding protein ArtP compare
BWI76_RS08210 -1.2 -1.7 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS14075 -1.2 -1.1 TetR family transcriptional regulator compare
BWI76_RS13595 -1.2 -3.5 transcriptional regulator compare
BWI76_RS21370 -1.2 -0.5 ATP-dependent RNA helicase SrmB compare
BWI76_RS26965 -1.2 -5.0 hypothetical protein compare
BWI76_RS02410 -1.2 -0.8 EF-P beta-lysylation protein EpmB compare
BWI76_RS20895 -1.2 -3.7 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS19525 -1.2 -2.7 D-alanyl-D-alanine endopeptidase compare
BWI76_RS23825 -1.2 -5.6 hypothetical protein compare
BWI76_RS25505 -1.2 -4.3 RNase E specificity factor CsrD compare
BWI76_RS01080 -1.2 -4.7 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS13090 -1.1 -2.3 phenylacetate-CoA oxygenase subunit PaaA compare
BWI76_RS21340 -1.1 -2.1 SoxR reducing system protein RseC compare
BWI76_RS01115 -1.1 -2.0 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS00265 -1.1 -6.2 potassium transporter Kup compare
BWI76_RS04530 -1.1 -1.1 peptidylprolyl isomerase SurA compare
BWI76_RS09475 -1.1 -2.5 putrescine ABC transporter permease PotI compare
BWI76_RS24315 -1.1 -4.3 cell division protein FtsP compare
BWI76_RS21000 -1.1 -4.7 exopolyphosphatase compare
BWI76_RS18125 -1.1 -2.4 murein DD-endopeptidase MepM compare
BWI76_RS00505 -1.1 -1.9 PTS system, sorbose-specific IIB component compare
BWI76_RS16500 -1.1 -1.9 superoxide dismutase [Fe] compare
BWI76_RS27760 -1.1 -2.9 lactam utilization protein LamB compare
BWI76_RS05235 -1.1 -0.9 hypothetical protein compare
BWI76_RS25065 -1.1 -1.4 polyribonucleotide nucleotidyltransferase compare
BWI76_RS04525 -1.1 -1.5 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS02735 -1.1 -4.1 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS16315 -1.0 -1.3 SirA-like protein compare
BWI76_RS11150 -1.0 -1.3 membrane protein compare
BWI76_RS07065 -1.0 -3.6 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS27280 -1.0 -4.3 polymerase compare
BWI76_RS24040 -1.0 -1.9 hypothetical protein compare
BWI76_RS11300 -1.0 -1.0 cupin compare
BWI76_RS21310 -1.0 -0.9 DNA repair protein RecO compare
BWI76_RS26755 -1.0 -4.7 peptidase M16 compare
BWI76_RS20170 -1.0 -2.9 NADH-quinone oxidoreductase subunit F compare
BWI76_RS08385 -1.0 -2.0 citrate (Si)-synthase compare
BWI76_RS01565 -1.0 -1.4 NADH pyrophosphatase compare
BWI76_RS00760 -1.0 -2.0 cell division protein FtsN compare
BWI76_RS24290 -1.0 -2.4 membrane protein compare
BWI76_RS05870 -1.0 -2.3 ABC transporter compare
BWI76_RS09025 -1.0 -2.2 GntR family transcriptional regulator compare
BWI76_RS09320 -1.0 -2.2 P2 phage tail completion protein R compare
BWI76_RS12870 -1.0 -2.3 putative phytanoyl-CoA dioxygenase compare
BWI76_RS20350 -1.0 -3.2 amidophosphoribosyltransferase compare
BWI76_RS25600 -1.0 -0.7 tRNA-Thr compare
BWI76_RS12620 -0.9 -3.4 2-nitropropane dioxygenase compare
BWI76_RS03595 -0.9 -1.2 ethanolamine utilization protein EutM compare
BWI76_RS23120 -0.9 -1.6 propanediol dehydratase medium subunit compare
BWI76_RS23580 -0.9 -2.1 hypothetical protein compare
BWI76_RS06535 -0.9 -1.3 endopeptidase La compare
BWI76_RS09190 -0.9 -1.9 hypothetical protein compare
BWI76_RS01775 -0.9 -1.0 hypothetical protein compare
BWI76_RS27385 -0.9 -3.9 orotate phosphoribosyltransferase compare
BWI76_RS15435 -0.9 -1.3 hypothetical protein compare


Specific Phenotypes

For 10 genes in this experiment

For supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered across organisms