Experiment set28IT059 for Klebsiella michiganensis M5al

Compare to:

Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS11700 +1.3 2.4 hypothetical protein compare
BWI76_RS01585 +1.2 6.1 transcriptional regulator compare
BWI76_RS05075 +1.1 1.6 type II secretion system protein GspG compare
BWI76_RS24900 +1.1 2.2 DeoR family transcriptional regulator compare
BWI76_RS21105 +1.1 8.6 penicillin-binding protein 1C compare
BWI76_RS00865 +1.1 3.3 DNA-binding transcriptional regulator OxyR compare
BWI76_RS15600 +1.1 3.0 hypothetical protein compare
BWI76_RS16675 +1.0 1.8 ABC transporter compare
BWI76_RS11515 +1.0 1.9 peptide-methionine (R)-S-oxide reductase compare
BWI76_RS08380 +1.0 1.8 endonuclease VIII compare
BWI76_RS09255 +1.0 2.5 hypothetical protein compare
BWI76_RS02580 +1.0 1.8 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS25480 +0.9 2.3 ribonuclease E/G compare
BWI76_RS07255 +0.9 2.7 hypothetical protein compare
BWI76_RS15605 +0.9 2.5 hypothetical protein compare
BWI76_RS26085 +0.9 0.9 3-dehydroquinate synthase compare
BWI76_RS26245 +0.9 2.8 transcriptional regulator compare
BWI76_RS11435 +0.9 2.3 hypothetical protein compare
BWI76_RS26150 +0.9 2.0 molecular chaperone Hsp33 compare
BWI76_RS20435 +0.9 0.8 chorismate synthase compare
BWI76_RS20230 +0.8 1.6 hypothetical protein compare
BWI76_RS15195 +0.8 1.3 DUF4186 domain-containing protein compare
BWI76_RS11810 +0.8 2.3 outer membrane protein OmpW compare
BWI76_RS16920 +0.8 1.8 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS06405 +0.8 2.7 2-dehydropantoate 2-reductase compare
BWI76_RS27395 +0.8 3.1 hypothetical protein compare
BWI76_RS04900 +0.8 1.4 DUF2950 domain-containing protein compare
BWI76_RS16760 +0.8 3.1 lipase compare
BWI76_RS21490 +0.8 5.4 GGDEF domain-containing protein compare
BWI76_RS22640 +0.8 2.1 hypothetical protein compare
BWI76_RS13490 +0.8 2.2 pyrimidine-specific ribonucleoside hydrolase RihA compare
BWI76_RS06595 +0.8 1.9 hypothetical protein compare
BWI76_RS18335 +0.8 3.9 DNA-binding response regulator compare
BWI76_RS21110 +0.8 5.7 hypothetical protein compare
BWI76_RS23470 +0.8 5.7 hypothetical protein compare
BWI76_RS22850 +0.7 2.6 tRNA pseudouridine synthase TruC compare
BWI76_RS25920 +0.7 1.4 peptidylprolyl isomerase compare
BWI76_RS23520 +0.7 1.8 hypothetical protein compare
BWI76_RS17965 +0.7 3.6 MFS transporter compare
BWI76_RS23070 +0.7 2.0 cobalt-precorrin-7 (C(5))-methyltransferase compare
BWI76_RS23500 +0.7 6.4 hypothetical protein compare
BWI76_RS25290 +0.7 2.4 monofunctional biosynthetic peptidoglycan transglycosylase compare
BWI76_RS23505 +0.7 6.3 ferrous iron transporter B compare
BWI76_RS07765 +0.7 1.1 thioesterase compare
BWI76_RS08720 +0.7 1.5 imidazolonepropionase compare
BWI76_RS22815 +0.7 5.4 hybrid sensor histidine kinase/response regulator compare
BWI76_RS23015 +0.7 1.5 cobalt transporter ATP-binding subunit compare
BWI76_RS01900 +0.7 2.1 tRNA-dihydrouridine synthase A compare
BWI76_RS07265 +0.7 2.4 ABC transporter ATP-binding protein compare
BWI76_RS12985 +0.7 1.4 transcriptional regulator compare
BWI76_RS11125 +0.7 1.4 metal-dependent hydrolase compare
BWI76_RS27830 +0.7 2.8 type I toxin-antitoxin system toxin TisB compare
BWI76_RS19205 +0.7 3.0 putative proline iminopeptidase compare
BWI76_RS15270 +0.7 2.1 phenazine biosynthesis protein PhzF family compare
BWI76_RS26335 +0.7 3.2 ABC transporter ATP-binding protein compare
BWI76_RS24400 +0.7 2.4 outer membrane channel protein TolC compare
BWI76_RS11840 +0.7 1.8 tryptophan synthase subunit alpha compare
BWI76_RS04055 +0.7 6.1 GGDEF domain-containing protein compare
BWI76_RS10735 +0.7 1.7 hypothetical protein compare
BWI76_RS21485 +0.7 4.1 DUF4154 domain-containing protein compare
BWI76_RS16995 +0.7 3.2 Fe-S cluster assembly protein SufB compare
BWI76_RS13290 +0.7 2.2 protocatechuate 3,4-dioxygenase subunit beta compare
BWI76_RS06080 +0.7 1.8 taurine dioxygenase compare
BWI76_RS16910 +0.7 1.2 2-keto-4-pentenoate hydratase compare
BWI76_RS21245 +0.6 1.6 nitrogen regulatory protein P-II compare
BWI76_RS07730 +0.6 1.1 iron-enterobactin transporter membrane protein compare
BWI76_RS17420 +0.6 3.2 hypothetical protein compare
BWI76_RS13585 +0.6 2.3 4-oxalocrotonate tautomerase compare
BWI76_RS00480 +0.6 2.1 hypothetical protein compare
BWI76_RS13125 +0.6 2.0 3-hydroxyacyl-CoA dehydrogenase compare
BWI76_RS08615 +0.6 1.4 galactokinase compare
BWI76_RS10380 +0.6 1.4 polar amino acid ABC transporter inner membrane subunit compare
BWI76_RS07955 +0.6 3.1 nucleoside diphosphate kinase regulator compare
BWI76_RS24825 +0.6 1.1 2-hydroxy-3-oxopropionate reductase compare
BWI76_RS07165 +0.6 1.9 hypothetical protein compare
BWI76_RS11410 +0.6 1.9 leucine efflux protein compare
BWI76_RS20390 +0.6 1.1 erythronate-4-phosphate dehydrogenase compare
BWI76_RS04100 +0.6 1.5 peptide chain release factor 3 compare
BWI76_RS11845 +0.6 1.5 tryptophan synthase subunit beta compare
BWI76_RS16665 +0.6 1.9 ABC transporter permease compare
BWI76_RS07185 +0.6 1.1 hypothetical protein compare
BWI76_RS06880 +0.6 1.7 biopolymer transport protein ExbD/TolR compare
BWI76_RS08825 +0.6 1.2 cyclic pyranopterin monophosphate synthase MoaC compare
BWI76_RS10310 +0.6 2.5 DNA-binding transcriptional regulator RamA compare
BWI76_RS19570 +0.6 1.4 3-hydroxybenzoate 6-hydroxylase compare
BWI76_RS06730 +0.6 1.2 lac repressor compare
BWI76_RS26855 +0.6 1.6 cellulose synthase operon protein YhjQ compare
BWI76_RS23490 +0.6 3.8 fimbrial protein compare
BWI76_RS15530 +0.6 1.2 hypothetical protein compare
BWI76_RS19465 +0.6 1.9 hypothetical protein compare
BWI76_RS26485 +0.6 3.9 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase compare
BWI76_RS01720 +0.6 3.0 L-sorbose 1-phosphate reductase (EC 1.1.1.-) (from data) compare
BWI76_RS09850 +0.6 4.1 L,D-transpeptidase compare
BWI76_RS17980 +0.6 2.0 RNA chaperone ProQ compare
BWI76_RS17935 +0.6 2.1 DUF2627 domain-containing protein compare
BWI76_RS12860 +0.6 1.6 hypothetical protein compare
BWI76_RS26125 +0.6 3.0 carboxypeptidase/penicillin-binding protein 1A compare
BWI76_RS19865 +0.6 1.6 ecotin compare
BWI76_RS27380 +0.6 2.9 nucleoid occlusion factor SlmA compare
BWI76_RS09490 +0.6 1.7 DNA-binding response regulator compare
BWI76_RS16935 +0.6 1.0 shikimate dehydrogenase compare
BWI76_RS19850 +0.6 1.2 tRNA-Pro compare
BWI76_RS14300 +0.6 2.3 hypothetical protein compare
BWI76_RS15360 +0.6 1.4 hypothetical protein compare
BWI76_RS17470 +0.6 1.4 MerR family transcriptional regulator compare
BWI76_RS25980 +0.6 2.2 hypothetical protein compare
BWI76_RS06550 +0.6 2.9 competence protein ComEA compare
BWI76_RS17920 +0.6 1.0 23S rRNA (guanine(745)-N(1))-methyltransferase compare
BWI76_RS24110 +0.6 1.1 YggU family protein compare
BWI76_RS16400 +0.6 1.9 pyridoxal kinase compare
BWI76_RS21070 +0.6 0.7 outer membrane protein assembly factor BamB compare
BWI76_RS15670 +0.6 1.2 hypothetical protein compare
BWI76_RS23555 +0.6 2.7 type 1 major fimbrial subunit precursor compare
BWI76_RS04060 +0.6 1.5 hypothetical protein compare
BWI76_RS11455 +0.6 1.4 AraC family transcriptional regulator compare
BWI76_RS26480 +0.6 3.5 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase compare
BWI76_RS08330 +0.6 1.2 hypothetical protein compare
BWI76_RS04580 +0.6 2.8 L-ribulose-5-phosphate 4-epimerase compare
BWI76_RS23330 +0.6 3.3 transcriptional regulator GalR compare
BWI76_RS23305 +0.6 1.7 NADP(H)-dependent aldo-keto reductase compare
BWI76_RS06065 +0.5 2.6 taurine ABC transporter substrate-binding protein compare
BWI76_RS26285 +0.5 1.8 glycerophosphodiester phosphodiesterase compare
BWI76_RS22935 +0.5 1.2 L-fucose mutarotase compare
BWI76_RS08510 +0.5 2.0 cyd operon protein YbgE compare
BWI76_RS07820 +0.5 1.1 S-methyl-5-thioribose kinase compare
BWI76_RS07865 +0.5 0.9 methylthioribulose 1-phosphate dehydratase compare
BWI76_RS03295 +0.5 1.4 transposase compare
BWI76_RS24765 +0.5 1.6 membrane protein compare
BWI76_RS17945 +0.5 1.0 hypothetical protein compare
BWI76_RS12550 +0.5 0.8 hypothetical protein compare
BWI76_RS08765 +0.5 1.4 8-amino-7-oxononanoate synthase compare
BWI76_RS01595 +0.5 1.3 zinc resistance protein compare
BWI76_RS27520 +0.5 1.8 sodium/glutamate symporter compare
BWI76_RS19550 +0.5 2.4 phospho-cellobiase compare
BWI76_RS14615 +0.5 0.9 hypothetical protein compare
BWI76_RS18270 +0.5 1.3 hypothetical protein compare
BWI76_RS22805 +0.5 3.3 GTP diphosphokinase compare
BWI76_RS09195 +0.5 0.9 N-acetyltransferase compare
BWI76_RS09450 +0.5 1.1 30S ribosomal protein S6--L-glutamate ligase compare
BWI76_RS10575 +0.5 0.8 polar amino acid ABC transporter permease compare
BWI76_RS18535 +0.5 1.6 alpha/beta hydrolase compare
BWI76_RS00795 +0.5 1.2 carboxymuconolactone decarboxylase compare
BWI76_RS15230 +0.5 2.1 4-hydroxythreonine-4-phosphate dehydrogenase compare
BWI76_RS19215 +0.5 1.1 proline-specific peptidase compare
BWI76_RS26215 +0.5 2.7 glycogen-branching enzyme compare
BWI76_RS00970 +0.5 1.7 branched chain amino acid aminotransferase compare
BWI76_RS08620 +0.5 1.5 galactose-1-phosphate uridylyltransferase compare
BWI76_RS14975 +0.5 2.1 glyoxalase-like domain protein compare
BWI76_RS25645 +0.5 2.2 shikimate dehydrogenase compare
BWI76_RS02630 +0.5 2.4 PTS ascorbate transporter subunit IIA compare
BWI76_RS22270 +0.5 1.5 nickel transporter compare
BWI76_RS08945 +0.5 3.8 catecholate siderophore receptor Fiu compare
BWI76_RS21495 +0.5 2.5 outer membrane lipoprotein compare
BWI76_RS08590 +0.5 2.0 zinc transporter ZitB compare
BWI76_RS07285 +0.5 1.2 LysR family transcriptional regulator compare
BWI76_RS11060 +0.5 1.4 septum formation inhibitor Maf compare
BWI76_RS05415 +0.5 2.2 LysR family transcriptional regulator compare
BWI76_RS27455 +0.5 0.7 DUF805 domain-containing protein compare
BWI76_RS20810 +0.5 2.1 ethanolamine utilization cobalamin adenosyltransferase compare
BWI76_RS08395 +0.5 1.3 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS12480 +0.5 1.7 TIGR01620 family protein compare
BWI76_RS11790 +0.5 1.5 acyl-CoA thioesterase compare
BWI76_RS19605 +0.5 3.2 CidB/LrgB family autolysis modulator compare
BWI76_RS05190 +0.5 2.7 hypothetical protein compare
BWI76_RS21940 +0.5 2.1 SDR family oxidoreductase compare
BWI76_RS09870 +0.5 2.8 aromatic amino acid aminotransferase compare
BWI76_RS12610 +0.5 1.7 LysR family transcriptional regulator compare
BWI76_RS20310 +0.5 2.1 hypothetical protein compare
BWI76_RS09560 +0.5 1.2 DoxX family membrane protein compare
BWI76_RS20995 +0.5 2.2 RNA degradosome polyphosphate kinase compare
BWI76_RS20280 +0.5 2.3 phosphodiesterase compare
BWI76_RS25300 +0.5 1.3 hybrid sensor histidine kinase/response regulator compare
BWI76_RS16815 +0.5 1.3 periplasmic binding protein compare
BWI76_RS11180 +0.5 1.8 hypothetical protein compare
BWI76_RS16950 +0.5 1.5 TetR family transcriptional regulator compare
BWI76_RS18905 +0.5 2.0 putrescine/spermidine ABC transporter compare
BWI76_RS24915 +0.5 3.4 penicillin-binding protein activator compare
BWI76_RS11440 +0.5 0.8 hypothetical protein compare
BWI76_RS16755 +0.5 1.3 acetoin reductase compare
BWI76_RS23515 +0.5 1.2 antibiotic biosynthesis monooxygenase compare
BWI76_RS16660 +0.5 1.8 SfnB family sulfur acquisition oxidoreductase compare
BWI76_RS11665 +0.5 1.8 exodeoxyribonuclease III compare
BWI76_RS13320 +0.5 1.6 putative LpxA-like enzyme compare
BWI76_RS12600 +0.5 2.4 MFS transporter compare
BWI76_RS20750 +0.5 0.8 carboxysome structural protein EutK compare
BWI76_RS23030 +0.5 1.1 cobalamin biosynthesis protein CbiM compare
BWI76_RS15125 +0.5 1.3 acetyltransferase compare
BWI76_RS17890 +0.5 1.4 PTS mannose transporter subunit EIIAB compare
BWI76_RS18395 +0.5 2.0 diguanylate cyclase compare
BWI76_RS15475 +0.5 1.4 NAD(P)-dependent oxidoreductase compare
BWI76_RS00425 +0.5 1.9 D-tyrosyl-tRNA(Tyr) deacylase compare
BWI76_RS13630 +0.5 2.1 ABC transporter compare
BWI76_RS24295 +0.5 1.2 AraC family transcriptional regulator compare
BWI76_RS14170 +0.5 1.3 hypothetical protein compare
BWI76_RS11820 +0.5 0.7 short-chain dehydrogenase/reductase SDR compare
BWI76_RS13815 +0.5 1.3 ABC transporter compare
BWI76_RS07525 +0.5 1.9 ABC transporter permease compare
BWI76_RS22095 +0.5 0.7 multidrug export protein EmrA compare
BWI76_RS10770 +0.5 1.0 pyrimidine utilization protein C compare
BWI76_RS02595 +0.5 1.3 hypothetical protein compare


Specific Phenotypes

For 10 genes in this experiment

For supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered across organisms