Experiment set28IT044 for Burkholderia phytofirmans PsJN

Compare to:

P. phyto PHYTO2 MOI 1

200 most important genes:

  gene name fitness t score description  
BPHYT_RS06390 -5.0 -2.6 ribosome-associated protein IOJAP compare
BPHYT_RS31415 -4.7 -1.2 amino acid ABC transporter permease compare
BPHYT_RS23350 -4.3 -1.9 NAD-dependent epimerase/dehydratase compare
BPHYT_RS17525 -4.2 -1.9 glutaredoxin compare
BPHYT_RS17095 -4.1 -3.7 proline--tRNA ligase compare
BPHYT_RS13605 -4.0 -1.1 tRNA-Pro compare
BPHYT_RS29540 -3.9 -1.0 aldolase compare
BPHYT_RS29100 -3.8 -1.0 ketosteroid isomerase compare
BPHYT_RS09980 -3.8 -1.0 TetR family transcriptional regulator compare
BPHYT_RS10750 -3.8 -1.0 LysR family transcriptional regulator compare
BPHYT_RS08545 -3.7 -1.4 oxidoreductase compare
BPHYT_RS12900 -3.7 -1.6 transposase compare
BPHYT_RS07320 -3.7 -1.0 dihydrodipicolinate synthetase compare
BPHYT_RS30490 -3.6 -0.9 2-haloalkanoic acid dehalogenase compare
BPHYT_RS25110 -3.6 -1.3 sarcosine oxidase subunit delta compare
BPHYT_RS30450 -3.5 -0.9 ABC transporter permease compare
BPHYT_RS27890 -3.5 -0.9 hypothetical protein compare
BPHYT_RS10645 -3.5 -0.9 cyanate hydratase compare
BPHYT_RS08165 -3.5 -1.3 pilus assembly protein TadE compare
BPHYT_RS25335 -3.4 -0.9 hypothetical protein compare
BPHYT_RS28575 -3.4 -0.9 transcriptional regulator compare
BPHYT_RS30515 -3.4 -1.8 sorbose dehydrogenase compare
BPHYT_RS36090 -3.3 -2.0 hypothetical protein compare
BPHYT_RS26470 -3.3 -0.9 MFS transporter compare
BPHYT_RS26025 -3.3 -0.9 hypothetical protein compare
BPHYT_RS26510 -3.3 -1.5 transcriptional regulator compare
BPHYT_RS18910 -3.3 -1.5 FlgN compare
BPHYT_RS12550 -3.3 -0.8 GTP-binding protein HflX compare
BPHYT_RS20905 -3.2 -1.4 hypothetical protein compare
BPHYT_RS34490 -3.2 -0.8 hypothetical protein compare
BPHYT_RS08150 -3.2 -0.8 membrane protein compare
BPHYT_RS29520 -3.2 -0.8 hypothetical protein compare
BPHYT_RS30040 -3.2 -0.8 hypothetical protein compare
BPHYT_RS13395 -3.2 -1.2 endoribonuclease L-PSP compare
BPHYT_RS26465 -3.2 -0.8 metallophosphoesterase compare
BPHYT_RS28025 -3.1 -1.2 3-hydroxyisobutyrate dehydrogenase compare
BPHYT_RS23430 -3.1 -1.2 bifunctional D-altronate/D-mannonate dehydratase compare
BPHYT_RS27125 -3.1 -1.2 hypothetical protein compare
BPHYT_RS10135 -3.1 -0.8 hypothetical protein compare
BPHYT_RS23520 -3.1 -1.1 peroxidase compare
BPHYT_RS08525 -3.0 -0.8 SAM-dependent methyltransferase compare
BPHYT_RS23460 -3.0 -0.8 AraC family transcriptional regulator compare
BPHYT_RS25870 -3.0 -0.8 type III secretion system ATPase compare
BPHYT_RS13390 -3.0 -0.8 IclR family transcriptional regulator compare
BPHYT_RS06320 -2.9 -1.1 chemotaxis protein CheY compare
BPHYT_RS18590 -2.9 -0.8 hypothetical protein compare
BPHYT_RS30055 -2.9 -1.3 hypothetical protein compare
BPHYT_RS29850 -2.9 -1.1 protein tyrosine kinase compare
BPHYT_RS36275 -2.8 -1.3 hypothetical protein compare
BPHYT_RS20245 -2.8 -2.7 iron ABC transporter substrate-binding protein compare
BPHYT_RS07760 -2.8 -1.4 diguanylate phosphodiesterase compare
BPHYT_RS31130 -2.8 -2.3 hypothetical protein compare
BPHYT_RS23770 -2.8 -1.0 GntR family transcriptional regulator compare
BPHYT_RS14550 -2.7 -0.7 tRNA-Asn compare
BPHYT_RS26685 -2.7 -1.0 precorrin-8X methylmutase compare
BPHYT_RS09565 -2.7 -1.0 acetyl-CoA acetyltransferase compare
BPHYT_RS27495 -2.6 -0.7 hypothetical protein compare
BPHYT_RS11955 -2.6 -1.4 hemolysin D compare
BPHYT_RS28680 -2.6 -1.4 porin compare
BPHYT_RS23920 -2.6 -1.9 malonate decarboxylase subunit beta compare
BPHYT_RS20970 -2.6 -1.0 hypothetical protein compare
BPHYT_RS26035 -2.6 -2.0 ABC transporter ATP-binding protein compare
BPHYT_RS17920 -2.5 -1.1 protein CyaY compare
BPHYT_RS07140 -2.5 -1.8 hypothetical protein compare
BPHYT_RS17890 -2.5 -1.1 shikimate kinase compare
BPHYT_RS25500 -2.5 -1.1 hypothetical protein compare
BPHYT_RS07090 -2.5 -1.1 hypothetical protein compare
BPHYT_RS27060 -2.5 -1.4 photosystem reaction center subunit H compare
BPHYT_RS11635 -2.5 -0.6 RNA polymerase subunit sigma-24 compare
BPHYT_RS22295 -2.5 -1.3 LysR family transcriptional regulator compare
BPHYT_RS36400 -2.4 -0.9 hypothetical protein compare
BPHYT_RS23570 -2.4 -2.6 chemotaxis protein CheY compare
BPHYT_RS02365 -2.4 -1.1 hypothetical protein compare
BPHYT_RS32210 -2.4 -0.9 hypothetical protein compare
BPHYT_RS04910 -2.4 -1.1 phenylacetic acid degradation protein compare
BPHYT_RS21855 -2.4 -2.8 hypothetical protein compare
BPHYT_RS20750 -2.3 -0.8 LacI family transcriptional regulator compare
BPHYT_RS05905 -2.3 -0.9 hypothetical protein compare
BPHYT_RS22715 -2.3 -2.5 L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) (from data) compare
BPHYT_RS10650 -2.3 -0.8 membrane protein compare
BPHYT_RS34675 -2.3 -2.7 DNA-binding protein compare
BPHYT_RS30775 -2.3 -1.1 gluconate 2-dehydrogenase compare
BPHYT_RS21350 -2.3 -1.4 ADP-glucose pyrophosphorylase compare
BPHYT_RS20155 -2.3 -0.8 hypothetical protein compare
BPHYT_RS20120 -2.3 -2.4 porin compare
BPHYT_RS17265 -2.3 -0.8 cell division protein compare
BPHYT_RS14865 -2.2 -1.0 UDP-glucose 6-dehydrogenase compare
BPHYT_RS10500 -2.2 -1.2 acetolactate synthase compare
BPHYT_RS26300 -2.2 -1.2 ATP-dependent DNA ligase compare
BPHYT_RS10065 -2.2 -1.0 cytochrome C oxidase subunit I compare
BPHYT_RS28360 -2.2 -0.8 carboxymuconolactone decarboxylase compare
BPHYT_RS17240 -2.2 -0.6 cell division protein FtsW compare
BPHYT_RS24995 -2.2 -2.6 hypothetical protein compare
BPHYT_RS33355 -2.2 -3.6 oxalyl-CoA decarboxylase compare
BPHYT_RS27155 -2.2 -1.0 peroxiredoxin compare
BPHYT_RS14505 -2.2 -1.1 membrane protein compare
BPHYT_RS14060 -2.2 -1.0 peptidase M23 compare
BPHYT_RS25845 -2.2 -0.8 RND transporter MFP subunit compare
BPHYT_RS30140 -2.1 -0.8 3-methylitaconate isomerase compare
BPHYT_RS30225 -2.1 -3.0 AsnC family transcriptional regulator compare
BPHYT_RS31020 -2.1 -1.4 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
BPHYT_RS13320 -2.1 -0.8 allantoate amidohydrolase compare
BPHYT_RS20725 -2.1 -1.1 histidine kinase compare
BPHYT_RS10005 -2.1 -0.7 hypothetical protein compare
BPHYT_RS28485 -2.1 -0.5 GntR family transcriptional regulator compare
BPHYT_RS13450 -2.1 -0.9 GntR family transcriptional regulator compare
BPHYT_RS13245 -2.0 -2.4 hypothetical protein compare
BPHYT_RS29185 -2.0 -1.1 sugar ABC transporter permease compare
BPHYT_RS22815 -2.0 -1.1 TonB-denpendent receptor compare
BPHYT_RS26740 -2.0 -1.0 hypothetical protein compare
BPHYT_RS09545 -2.0 -1.3 peptide methionine sulfoxide reductase compare
BPHYT_RS11130 -2.0 -2.7 chemotaxis protein compare
BPHYT_RS20475 -2.0 -1.3 hypothetical protein compare
BPHYT_RS18835 -2.0 -1.0 flagellar biosynthesis protein FliR compare
BPHYT_RS36130 -2.0 -0.9 hypothetical protein compare
BPHYT_RS12825 -2.0 -1.2 phasin family protein compare
BPHYT_RS17530 -1.9 -2.7 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BPHYT_RS23740 -1.9 -3.4 AraC family transcriptional regulator compare
BPHYT_RS28635 -1.9 -1.3 hypothetical protein compare
BPHYT_RS16085 -1.9 -2.0 DeoR faimly transcriptional regulator compare
BPHYT_RS17030 -1.9 -0.8 lipid hydroperoxide peroxidase compare
BPHYT_RS21725 -1.9 -1.2 taurine ABC transporter substrate-binding protein compare
BPHYT_RS20790 -1.9 -0.7 TetR family transcriptional regulator compare
BPHYT_RS26115 -1.9 -1.9 polysaccharide deacetylase compare
BPHYT_RS26435 -1.9 -1.0 hypothetical protein compare
BPHYT_RS23630 -1.9 -2.2 hypothetical protein compare
BPHYT_RS29485 -1.9 -1.4 phosphonate ABC transporter ATP-binding protein compare
BPHYT_RS28470 -1.9 -0.7 hypothetical protein compare
BPHYT_RS31910 -1.8 -0.9 hypothetical protein compare
BPHYT_RS21905 -1.8 -0.7 IclR family transcriptional regulator compare
BPHYT_RS25980 -1.8 -0.7 urea carboxylase compare
BPHYT_RS10740 -1.8 -0.7 LuxR family transcriptional regulator compare
BPHYT_RS27305 -1.8 -0.7 hypothetical protein compare
BPHYT_RS10765 -1.8 -1.6 amidase compare
BPHYT_RS08235 -1.8 -0.5 nucleoprotein, Hfg, host factor I compare
BPHYT_RS07595 -1.8 -0.9 membrane protein compare
BPHYT_RS05290 -1.8 -0.7 hypothetical protein compare
BPHYT_RS04965 -1.8 -4.0 ATP-binding protein compare
BPHYT_RS18610 -1.8 -4.0 lytic transglycosylase compare
BPHYT_RS10120 -1.8 -1.4 membrane protein compare
BPHYT_RS08995 -1.8 -0.6 hypothetical protein compare
BPHYT_RS24350 -1.8 -1.8 hypothetical protein compare
BPHYT_RS21385 -1.8 -1.0 short-chain dehydrogenase compare
BPHYT_RS17405 -1.8 -0.6 indole-3-glycerol phosphate synthase compare
BPHYT_RS21335 -1.8 -1.0 CDP-alcohol phosphatidyltransferase compare
BPHYT_RS01340 -1.8 -1.5 ChrB domain-containing protein compare
BPHYT_RS34805 -1.8 -3.7 ABC transporter compare
BPHYT_RS32260 -1.7 -0.6 hypothetical protein compare
BPHYT_RS35770 -1.7 -0.9 glyoxalase compare
BPHYT_RS29085 -1.7 -1.0 LysR family transcriptional regulator compare
BPHYT_RS25160 -1.7 -1.7 NAD/NADP-dependent betaine aldehyde dehydrogenase compare
BPHYT_RS03455 -1.7 -1.7 paraquat-inducible protein A compare
BPHYT_RS04005 -1.7 -1.6 GDP-L-fucose synthase compare
BPHYT_RS34810 -1.7 -1.8 RND transporter compare
BPHYT_RS33460 -1.7 -0.8 protocatechuate 3,4-dioxygenase subunit alpha compare
BPHYT_RS11765 -1.7 -0.6 polyamine ABC transporter permease compare
BPHYT_RS34655 -1.7 -0.8 2-amino-3-ketobutyrate CoA ligase compare
BPHYT_RS29820 -1.7 -1.8 hypothetical protein compare
BPHYT_RS22930 -1.7 -0.6 type II secretion system protein compare
BPHYT_RS08340 -1.7 -0.4 chemotaxis protein CheY compare
BPHYT_RS08355 -1.7 -0.7 hypothetical protein compare
BPHYT_RS16320 -1.7 -2.4 cyclic pyranopterin monophosphate synthase accessory protein compare
BPHYT_RS27295 -1.7 -1.0 hypothetical protein compare
BPHYT_RS22265 -1.6 -0.8 hypothetical protein compare
BPHYT_RS35675 -1.6 -1.3 short-chain dehydrogenase compare
BPHYT_RS09280 -1.6 -0.6 pyridoxal-5'-phosphate-dependent protein subunit beta compare
BPHYT_RS14855 -1.6 -0.7 ADP-L-glycero-D-manno-heptose-6-epimerase compare
BPHYT_RS22910 -1.6 -0.4 hypothetical protein compare
BPHYT_RS33060 -1.6 -1.2 hypothetical protein compare
BPHYT_RS33280 -1.6 -1.3 membrane protein compare
BPHYT_RS11540 -1.6 -1.4 ureidoglycolate hydrolase compare
BPHYT_RS25515 -1.6 -0.9 glutathione S-transferase compare
BPHYT_RS03155 -1.6 -1.8 histidine triad (HIT) protein compare
BPHYT_RS26680 -1.6 -1.9 oxidoreductase compare
BPHYT_RS07275 -1.6 -2.4 kynureninase compare
BPHYT_RS02710 -1.6 -0.9 hypothetical protein compare
BPHYT_RS09905 -1.6 -0.6 hypothetical protein compare
BPHYT_RS07325 -1.6 -0.4 GntR family transcriptional regulator compare
BPHYT_RS20065 -1.6 -1.4 hypothetical protein compare
BPHYT_RS28910 -1.6 -1.1 diguanylate phosphodiesterase compare
BPHYT_RS05870 -1.6 -1.9 hypothetical protein compare
BPHYT_RS36185 -1.5 -1.3 hypothetical protein compare
BPHYT_RS25180 -1.5 -1.1 serine hydroxymethyltransferase compare
BPHYT_RS16025 -1.5 -2.4 Kynurenine formamidase, bacterial (EC 3.5.1.9) (from data) compare
BPHYT_RS07415 -1.5 -2.2 hypothetical protein compare
BPHYT_RS04860 -1.5 -1.9 ABC transporter ATP-binding protein compare
BPHYT_RS34760 -1.5 -4.0 sensor histidine kinase compare
BPHYT_RS06215 -1.5 -2.0 recombinase RdgC compare
BPHYT_RS15890 -1.5 -0.7 3-hydroxy-2-methylbutyryl-CoA dehydrogenase compare
BPHYT_RS30100 -1.5 -1.6 copper oxidase compare
BPHYT_RS07690 -1.5 -1.5 AraC family transcriptional regulator compare
BPHYT_RS06255 -1.5 -1.7 spore coat protein U compare
BPHYT_RS27370 -1.5 -1.1 CoA transferase compare
BPHYT_RS33180 -1.5 -3.2 hypothetical protein compare
BPHYT_RS00365 -1.5 -2.8 ABC transporter substrate-binding protein compare
BPHYT_RS32360 -1.5 -0.8 spermidine/putrescine ABC transporter ATPase compare
BPHYT_RS03170 -1.5 -0.7 membrane protein compare
BPHYT_RS29320 -1.5 -0.7 histidine kinase compare
BPHYT_RS12280 -1.5 -0.7 RNA helicase compare
BPHYT_RS00940 -1.5 -1.3 transposase compare


Specific Phenotypes

For 3 genes in this experiment