Experiment set28IT044 for Burkholderia phytofirmans PsJN

200 most detrimental genes:

gene	name	fitness	t score	description
BPHYT_RS01455		+4.0	5.2	peptide deformylase
BPHYT_RS09500		+3.2	19.3	glucose-6-phosphate isomerase
BPHYT_RS12465		+2.5	5.3	inositol monophosphatase
BPHYT_RS06175		+2.4	5.2	LPS biosynthesis
BPHYT_RS16180		+2.4	1.6	TetR family transcriptional regulator
BPHYT_RS28830		+2.4	1.7	LysR family transcriptional regulator
BPHYT_RS11235		+2.4	2.2	hypothetical protein
BPHYT_RS19570		+2.4	20.3	sodium/hydrogen exchanger
BPHYT_RS17765		+2.4	15.3	toluene ABC transporter ATP-binding protein
BPHYT_RS33820		+2.3	19.0	histidine kinase
BPHYT_RS02595		+2.3	3.0	sulfurtransferase
BPHYT_RS04315		+2.2	10.9	UDP-N-acetylglucosamine 2-epimerase
BPHYT_RS17745		+2.2	7.9	toluene tolerance family protein
BPHYT_RS04385		+2.2	4.0	nucleoside-diphosphate sugar oxidoreductase
BPHYT_RS19565		+2.2	13.5	gamma-glutamyl:cysteine ligase
BPHYT_RS05575		+2.1	16.0	Fis family transcriptional regulator
BPHYT_RS16840		+2.1	3.1	transketolase
BPHYT_RS05560		+2.1	13.5	Fis family transcriptional regulator
BPHYT_RS29235		+2.0	2.9	cell shape determination protein CcmA
BPHYT_RS04350		+2.0	9.4	membrane protein
BPHYT_RS35310		+2.0	3.9	GCN5 family N-acetyltransferase
BPHYT_RS22940		+2.0	2.3	pilus assembly protein TadE
BPHYT_RS04300		+2.0	11.5	family 2 glycosyl transferase
BPHYT_RS17755		+2.0	10.8	ABC transporter substrate-binding protein
BPHYT_RS35955		+1.8	1.4	hypothetical protein
BPHYT_RS30610		+1.8	2.0	major facilitator transporter
BPHYT_RS05190		+1.7	5.8	ADP-heptose--LPS heptosyltransferase
BPHYT_RS33965		+1.7	3.7	methylcitrate synthase
BPHYT_RS28860		+1.7	1.7	haloacid dehalogenase
BPHYT_RS12615		+1.7	1.0	dihydrodipicolinate synthase
BPHYT_RS09585		+1.6	1.4	hypothetical protein
BPHYT_RS17760		+1.6	8.0	ABC transporter permease
BPHYT_RS02135		+1.6	2.0	glyoxylate reductase
BPHYT_RS17750		+1.6	11.1	VacJ family lipoprotein
BPHYT_RS33920		+1.5	8.9	type II citrate synthase
BPHYT_RS11335		+1.5	2.0	hypothetical protein
BPHYT_RS33845		+1.5	2.2	bacteriocin production protein
BPHYT_RS21330		+1.5	1.1	hypothetical protein
BPHYT_RS02640		+1.5	10.2	cytochrome C oxidase
BPHYT_RS02660		+1.5	2.3	membrane protein
BPHYT_RS05455		+1.5	1.8	AraC family transcriptional regulator
BPHYT_RS18655		+1.5	6.2	3-oxoacyl-ACP synthase
BPHYT_RS16335		+1.5	3.0	membrane protein
BPHYT_RS27570		+1.4	1.7	universal stress protein UspA
BPHYT_RS20025		+1.4	2.5	crotonase
BPHYT_RS07515		+1.4	1.4	photosystem reaction center subunit H
BPHYT_RS34295		+1.4	1.6	fimbrial protein
BPHYT_RS06195		+1.4	1.8	membrane protein
BPHYT_RS06985		+1.4	5.8	fumarate hydratase
BPHYT_RS03280		+1.4	0.8	mannose-1-phosphate guanylyltransferase
BPHYT_RS08135		+1.4	1.6	hypothetical protein
BPHYT_RS02880		+1.4	1.0	ATP-dependent protease
BPHYT_RS16175		+1.4	1.0	hemolysin D
BPHYT_RS06775		+1.3	2.0	nucleotide-binding protein
BPHYT_RS30720		+1.3	1.7	hypothetical protein
BPHYT_RS14400		+1.3	3.3	anti-sigma factor
BPHYT_RS05010		+1.3	3.1	RpiR family transcriptional regulator
BPHYT_RS15105		+1.3	4.7	FAD-dependent oxidoreductase
BPHYT_RS25220		+1.3	1.7	ferredoxin oxidoreductase
BPHYT_RS25020		+1.3	1.7	phospholipid-binding protein
BPHYT_RS05395		+1.3	2.1	hypothetical protein
BPHYT_RS07840		+1.3	2.9	muconate cycloisomerase
BPHYT_RS07705		+1.3	1.9	arginine succinyltransferase
BPHYT_RS33220		+1.3	5.9	group 1 glycosyl transferase
BPHYT_RS03375		+1.3	1.7	NAD(P) transhydrogenase
BPHYT_RS29090		+1.3	3.6	oxidoreductase
BPHYT_RS28740		+1.3	1.8	2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
BPHYT_RS25935		+1.2	1.8	type III secretion protein
BPHYT_RS28075		+1.2	1.4	cytochrome B561
BPHYT_RS17165		+1.2	1.5	cell division protein ZapD
BPHYT_RS35530		+1.2	1.3	arsenate reductase
BPHYT_RS11705		+1.2	1.7	hypothetical protein
BPHYT_RS25575		+1.2	1.2	alpha/beta hydrolase
BPHYT_RS26390		+1.2	1.0	antibiotic resistance protein
BPHYT_RS27175		+1.2	1.1	DNA-binding protein
BPHYT_RS33070		+1.2	3.0	haloacid dehalogenase
BPHYT_RS08960		+1.2	0.4	threonine synthase
BPHYT_RS24590		+1.2	0.8	DeoR faimly transcriptional regulator
BPHYT_RS12845		+1.2	8.7	ATPase
BPHYT_RS17705		+1.2	7.9	histidinol-phosphate aminotransferase
BPHYT_RS02665		+1.2	6.4	MFS transporter
BPHYT_RS05320		+1.2	1.5	beta-lactamase
BPHYT_RS20840		+1.2	2.2	beta-lactamase
BPHYT_RS10040		+1.2	1.2	hypothetical protein
BPHYT_RS20900		+1.2	2.0	phytanoyl-CoA dioxygenase
BPHYT_RS03520		+1.2	1.7	ATP--cobalamin adenosyltransferase
BPHYT_RS06065		+1.2	5.4	cytochrome C
BPHYT_RS18705		+1.2	1.6	5,10-methylenetetrahydrofolate reductase
BPHYT_RS04945		+1.2	9.4	membrane protein
BPHYT_RS22835		+1.2	0.8	flagellar motor protein MotA
BPHYT_RS24925		+1.2	1.5	cytochrome O ubiquinol oxidase
BPHYT_RS34785		+1.2	4.6	hypothetical protein
BPHYT_RS10430		+1.2	2.5	glycosyl transferase family 1
BPHYT_RS05155		+1.1	3.3	acetyltransferase GCN5
BPHYT_RS21990		+1.1	2.5	FAD-dependent oxidoreductase
BPHYT_RS04990		+1.1	1.2	hypothetical protein
BPHYT_RS24540		+1.1	2.0	DMSO reductase
BPHYT_RS30870		+1.1	2.7	chromate transporter
BPHYT_RS04950		+1.1	7.3	hypothetical protein
BPHYT_RS11750		+1.1	1.4	spermidine/putrescine ABC transporter ATP-binding protein
BPHYT_RS02635		+1.1	6.4	membrane protein
BPHYT_RS03470		+1.1	5.6	LysR family transcriptional regulator
BPHYT_RS06855		+1.1	4.4	dTDP-4-dehydrorhamnose reductase
BPHYT_RS10900		+1.1	2.4	histidine kinase
BPHYT_RS29035		+1.1	1.6	arsenic transporter
BPHYT_RS29215		+1.1	3.1	porin
BPHYT_RS31755		+1.1	1.5	amino acid ABC transporter ATPase
BPHYT_RS06400		+1.1	2.8	oxygen-dependent coproporphyrinogen-III oxidase
BPHYT_RS10140		+1.1	1.8	ABC transporter substrate-binding protein
BPHYT_RS29365		+1.1	1.3	ATP-NAD kinase
BPHYT_RS04985		+1.1	2.3	hypothetical protein
BPHYT_RS07630		+1.1	1.9	alkane 1-monooxygenase
BPHYT_RS22425		+1.1	2.6	GntR family transcriptional regulator
BPHYT_RS05895		+1.1	0.7	hypothetical protein
BPHYT_RS07295		+1.1	3.4	porin
BPHYT_RS09145		+1.1	7.2	poly-beta-hydroxybutyrate polymerase
BPHYT_RS16430		+1.1	8.1	cytochrome C
BPHYT_RS35005		+1.1	3.0	molecular chaperone DnaJ
BPHYT_RS01965		+1.1	1.3	tRNA-Ala
BPHYT_RS26560		+1.1	1.4	murein hydrolase transporter LrgA
BPHYT_RS27895		+1.0	1.5	enoyl-CoA hydratase
BPHYT_RS04370		+1.0	0.5	glycosyl transferase
BPHYT_RS36035		+1.0	0.8	hypothetical protein
BPHYT_RS34745		+1.0	1.1	hypothetical protein
BPHYT_RS02905		+1.0	9.1	RNA polymerase subunit sigma-54
BPHYT_RS14485		+1.0	3.5	ribonuclease E
BPHYT_RS20845		+1.0	1.3	peroxidase
BPHYT_RS00770		+1.0	1.1	conjugal transfer protein TraC
BPHYT_RS17675		+1.0	1.7	phosphoribosyl-AMP cyclohydrolase
BPHYT_RS03090		+1.0	1.0	hypothetical protein
BPHYT_RS14975		+1.0	1.9	hypothetical protein
BPHYT_RS08200		+1.0	2.0	pilus assembly protein
BPHYT_RS33990		+1.0	0.9	ATPase
BPHYT_RS17185		+1.0	3.7	N-acetylglutamate synthase
BPHYT_RS11050		+1.0	1.3	molecular chaperone
BPHYT_RS15620		+1.0	2.1	peptidyl-prolyl cis-trans isomerase
BPHYT_RS28535		+1.0	1.0	response regulator receiver
BPHYT_RS20085		+1.0	1.4	mannosyltransferase
BPHYT_RS33010		+1.0	2.2	hypothetical protein
BPHYT_RS12535		+1.0	0.7	membrane protein
BPHYT_RS24255		+1.0	1.6	hypothetical protein
BPHYT_RS16390		+1.0	2.6	MarR family transcriptional regulator
BPHYT_RS31300		+1.0	1.8	Crp/Fnr family transcriptional regulator
BPHYT_RS07640		+1.0	2.2	hypothetical protein
BPHYT_RS08060		+1.0	5.2	ribosome maturation factor RimP
BPHYT_RS05570		+1.0	2.8	hypothetical protein
BPHYT_RS22105		+1.0	3.3	tRNA synthetase
BPHYT_RS28630		+1.0	1.3	IclR family transcriptional regulator
BPHYT_RS05590		+1.0	5.8	trehalose-6-phosphate synthase
BPHYT_RS14195		+1.0	1.0	carbamoyl phosphate synthase small subunit
BPHYT_RS11685		+1.0	0.6	phasin family protein
BPHYT_RS30465		+1.0	1.0	short-chain dehydrogenase
BPHYT_RS01435		+1.0	8.6	LysR family transcriptional regulator
BPHYT_RS26955		+1.0	1.0	succinylglutamate desuccinylase
BPHYT_RS26930		+1.0	2.7	mechanosensitive ion channel protein
BPHYT_RS05365		+1.0	1.2	3-ketoacyl-ACP reductase
BPHYT_RS01960		+1.0	2.9	cytochrome C
BPHYT_RS35540		+1.0	4.7	ArsR family transcriptional regulator
BPHYT_RS11405		+1.0	2.5	hypothetical protein
BPHYT_RS15710		+1.0	0.3	ATP-dependent Clp protease ATP-binding protein
BPHYT_RS07845		+1.0	1.6	LysR family transcriptional regulator
BPHYT_RS26415		+1.0	1.3	glutathione S-transferase
BPHYT_RS25770		+1.0	0.9	hypothetical protein
BPHYT_RS36470		+0.9	0.9	hypothetical protein
BPHYT_RS12725		+0.9	7.0	regulator
BPHYT_RS31690		+0.9	1.3	hypothetical protein
BPHYT_RS29840		+0.9	0.8	polysaccharide biosynthesis protein
BPHYT_RS25000		+0.9	1.8	MFS transporter
BPHYT_RS12690		+0.9	2.4	hypothetical protein
BPHYT_RS03450		+0.9	4.4	paraquat-inducible protein A
BPHYT_RS34040		+0.9	2.4	hypothetical protein
BPHYT_RS08615		+0.9	1.3	hypothetical protein
BPHYT_RS22540		+0.9	1.8	metal ABC transporter permease
BPHYT_RS10345		+0.9	0.8	flagellar motor protein MotB
BPHYT_RS06940		+0.9	1.9	peroxiredoxin
BPHYT_RS20185		+0.9	1.4	sugar transferase
BPHYT_RS25005		+0.9	1.2	FMN reductase
BPHYT_RS10320		+0.9	3.5	hypothetical protein
BPHYT_RS22045		+0.9	1.2	peptide ABC transporter permease
BPHYT_RS14755		+0.9	1.5	tRNA (guanine-N(1)-)-methyltransferase
BPHYT_RS33175		+0.9	1.0	hypothetical protein
BPHYT_RS03410		+0.9	1.0	queuine tRNA-ribosyltransferase
BPHYT_RS07925		+0.9	1.6	glutamine amidotransferase
BPHYT_RS28245		+0.9	1.0	MFS transporter
BPHYT_RS10760		+0.9	1.6	major facilitator transporter
BPHYT_RS27735		+0.9	2.9	nitroreductase
BPHYT_RS25290		+0.9	1.3	membrane protein
BPHYT_RS15360		+0.9	1.0	hypothetical protein
BPHYT_RS20355		+0.9	2.3	ABC transporter substrate-binding protein
BPHYT_RS03830		+0.9	1.1	hypothetical protein
BPHYT_RS35405		+0.9	1.5	hypothetical protein
BPHYT_RS06070		+0.9	5.7	cytochrome C
BPHYT_RS14180		+0.9	0.8	membrane protein
BPHYT_RS33400		+0.9	1.5	magnesium transporter CorA
BPHYT_RS24625		+0.9	3.0	hypothetical protein
BPHYT_RS09390		+0.9	1.7	ABC transporter permease
BPHYT_RS08665		+0.9	0.6	hypothetical protein
BPHYT_RS07080		+0.9	1.4	glutathione S-transferase
BPHYT_RS07425		+0.9	1.2	hypothetical protein
BPHYT_RS23610		+0.9	1.9	alpha/beta hydrolase

Specific Phenotypes

For 3 genes in this experiment