Experiment set28IT043 for Burkholderia phytofirmans PsJN

Compare to:

P. phyto PHYTO2 MOI 1

200 most important genes:

  gene name fitness t score description  
BPHYT_RS22860 -4.9 -1.1 chemotaxis protein CheY compare
BPHYT_RS21620 -4.6 -1.1 GCN5 family acetyltransferase compare
BPHYT_RS05285 -4.6 -1.1 hypothetical protein compare
BPHYT_RS36220 -4.5 -1.1 hypothetical protein compare
BPHYT_RS01095 -4.4 -1.0 hypothetical protein compare
BPHYT_RS27160 -4.2 -1.0 hypothetical protein compare
BPHYT_RS25845 -4.2 -1.0 RND transporter MFP subunit compare
BPHYT_RS04400 -4.2 -1.4 Crp/Fnr family transcriptional regulator compare
BPHYT_RS09980 -4.1 -1.0 TetR family transcriptional regulator compare
BPHYT_RS06335 -4.1 -0.9 CopG family transcriptional regulator compare
BPHYT_RS22855 -4.0 -2.4 aldehyde-activating protein compare
BPHYT_RS07570 -4.0 -0.9 hypothetical protein compare
BPHYT_RS32750 -4.0 -0.9 lipoprotein compare
BPHYT_RS33805 -4.0 -0.9 hypothetical protein compare
BPHYT_RS00690 -4.0 -0.9 transcriptional regulator compare
BPHYT_RS32860 -4.0 -0.9 hypothetical protein compare
BPHYT_RS30490 -3.8 -0.9 2-haloalkanoic acid dehalogenase compare
BPHYT_RS21335 -3.8 -1.3 CDP-alcohol phosphatidyltransferase compare
BPHYT_RS11795 -3.7 -0.9 membrane protein compare
BPHYT_RS11765 -3.7 -0.9 polyamine ABC transporter permease compare
BPHYT_RS09930 -3.7 -1.2 LysR family transcriptional regulator compare
BPHYT_RS26510 -3.7 -1.5 transcriptional regulator compare
BPHYT_RS36385 -3.7 -0.8 TetR family transcriptional regulator compare
BPHYT_RS26185 -3.6 -0.8 thioesterase compare
BPHYT_RS30775 -3.6 -1.2 gluconate 2-dehydrogenase compare
BPHYT_RS22870 -3.6 -1.2 copper transporter compare
BPHYT_RS22455 -3.6 -0.8 phosphonate ABC transporter substrate-binding protein compare
BPHYT_RS12535 -3.6 -0.8 membrane protein compare
BPHYT_RS18705 -3.6 -1.4 5,10-methylenetetrahydrofolate reductase compare
BPHYT_RS04595 -3.5 -1.4 cytoplasmic protein compare
BPHYT_RS04910 -3.5 -1.2 phenylacetic acid degradation protein compare
BPHYT_RS16065 -3.5 -0.8 LacI family transcriptional regulator compare
BPHYT_RS29520 -3.5 -0.8 hypothetical protein compare
BPHYT_RS20845 -3.4 -1.1 peroxidase compare
BPHYT_RS34490 -3.4 -0.8 hypothetical protein compare
BPHYT_RS20590 -3.4 -2.0 methionine sulfoxide reductase A compare
BPHYT_RS29085 -3.4 -1.4 LysR family transcriptional regulator compare
BPHYT_RS23650 -3.4 -0.8 hypothetical protein compare
BPHYT_RS29695 -3.4 -1.1 hypothetical protein compare
BPHYT_RS05065 -3.4 -2.2 DNA mismatch repair protein MutS compare
BPHYT_RS09355 -3.4 -1.4 LysR family transcriptional regulator compare
BPHYT_RS36470 -3.3 -1.1 hypothetical protein compare
BPHYT_RS25870 -3.3 -0.8 type III secretion system ATPase compare
BPHYT_RS09000 -3.3 -0.8 competence protein ComE compare
BPHYT_RS06350 -3.3 -1.3 chemotaxis protein CheY compare
BPHYT_RS18760 -3.2 -1.7 flagellar biosynthesis protein FliT compare
BPHYT_RS26750 -3.1 -1.0 aldolase compare
BPHYT_RS29920 -3.1 -0.7 hypothetical protein compare
BPHYT_RS11745 -3.1 -0.7 (2Fe-2S)-binding protein compare
BPHYT_RS31910 -3.1 -1.0 hypothetical protein compare
BPHYT_RS25645 -3.0 -1.4 dehydrogenase compare
BPHYT_RS09565 -3.0 -1.0 acetyl-CoA acetyltransferase compare
BPHYT_RS14550 -2.9 -0.7 tRNA-Asn compare
BPHYT_RS34815 -2.9 -1.3 ABC transporter compare
BPHYT_RS17890 -2.9 -1.1 shikimate kinase compare
BPHYT_RS27655 -2.9 -0.9 potassium transporter compare
BPHYT_RS29365 -2.8 -1.2 ATP-NAD kinase compare
BPHYT_RS29255 -2.8 -3.0 aspartate carbamoyltransferase compare
BPHYT_RS28300 -2.8 -0.9 histone nucleoid-structuring protein H-NS compare
BPHYT_RS10125 -2.7 -1.1 hypothetical protein compare
BPHYT_RS16180 -2.7 -0.6 TetR family transcriptional regulator compare
BPHYT_RS21615 -2.7 -1.5 FMN-dependent NADH-azoreductase compare
BPHYT_RS31700 -2.7 -1.9 porin compare
BPHYT_RS29320 -2.7 -0.9 histidine kinase compare
BPHYT_RS25470 -2.7 -0.9 alkylhydroperoxidase compare
BPHYT_RS28830 -2.7 -0.6 LysR family transcriptional regulator compare
BPHYT_RS25140 -2.6 -1.5 hypothetical protein compare
BPHYT_RS14865 -2.6 -1.0 UDP-glucose 6-dehydrogenase compare
BPHYT_RS25875 -2.6 -0.8 type III secretion protein compare
BPHYT_RS07380 -2.6 -2.6 membrane protein compare
BPHYT_RS03655 -2.6 -0.8 membrane protein compare
BPHYT_RS23090 -2.6 -1.2 histidine kinase compare
BPHYT_RS10065 -2.6 -1.0 cytochrome C oxidase subunit I compare
BPHYT_RS26135 -2.5 -0.8 ABC transporter permease compare
BPHYT_RS23035 -2.5 -1.3 hypothetical protein compare
BPHYT_RS26525 -2.5 -0.8 amino acid ABC transporter substrate-binding protein compare
BPHYT_RS30645 -2.5 -2.2 hypothetical protein compare
BPHYT_RS28595 -2.5 -0.8 glyoxalase compare
BPHYT_RS26595 -2.5 -2.3 carbonic anhydrase compare
BPHYT_RS17240 -2.5 -0.6 cell division protein FtsW compare
BPHYT_RS12615 -2.5 -0.6 dihydrodipicolinate synthase compare
BPHYT_RS04370 -2.5 -0.6 glycosyl transferase compare
BPHYT_RS23975 -2.5 -1.9 peroxidase compare
BPHYT_RS35315 -2.5 -1.6 threonyl-tRNA synthetase compare
BPHYT_RS07515 -2.4 -1.1 photosystem reaction center subunit H compare
BPHYT_RS22940 -2.4 -1.0 pilus assembly protein TadE compare
BPHYT_RS08765 -2.4 -0.8 ABC transporter ATP-binding protein compare
BPHYT_RS02600 -2.4 -1.1 glutaredoxin compare
BPHYT_RS07220 -2.4 -1.5 GCN5 family acetyltransferase compare
BPHYT_RS10710 -2.4 -1.3 sensor histidine kinase compare
BPHYT_RS16250 -2.3 -0.9 N5-carboxyaminoimidazole ribonucleotide mutase compare
BPHYT_RS28485 -2.3 -0.5 GntR family transcriptional regulator compare
BPHYT_RS15015 -2.3 -0.7 ArsR family transcriptional regulator compare
BPHYT_RS20220 -2.3 -1.0 antibiotic synthesis protein MbtH compare
BPHYT_RS30450 -2.2 -0.7 ABC transporter permease compare
BPHYT_RS27430 -2.2 -0.9 LysR family transcriptional regulator compare
BPHYT_RS05620 -2.2 -0.9 CsbD family protein compare
BPHYT_RS03830 -2.2 -1.8 hypothetical protein compare
BPHYT_RS26815 -2.2 -2.3 1-aminocyclopropane-1-carboxylate deaminase compare
BPHYT_RS08235 -2.2 -0.5 nucleoprotein, Hfg, host factor I compare
BPHYT_RS17530 -2.2 -3.1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BPHYT_RS29185 -2.1 -1.1 sugar ABC transporter permease compare
BPHYT_RS23940 -2.1 -0.7 GntR family transcriptional regulator compare
BPHYT_RS27155 -2.1 -1.0 peroxiredoxin compare
BPHYT_RS12510 -2.1 -1.1 RNA-binding protein compare
BPHYT_RS29450 -2.1 -1.1 phosphonate metabolism protein compare
BPHYT_RS28470 -2.1 -0.7 hypothetical protein compare
BPHYT_RS31020 -2.1 -1.4 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
BPHYT_RS20790 -2.1 -0.7 TetR family transcriptional regulator compare
BPHYT_RS13610 -2.1 -1.5 MerR family transcriptional regulator compare
BPHYT_RS02005 -2.1 -1.5 diguanylate phosphodiesterase compare
BPHYT_RS06470 -2.0 -0.9 membrane protein compare
BPHYT_RS29105 -2.0 -1.3 class V aminotransferase compare
BPHYT_RS16090 -2.0 -1.1 hypothetical protein compare
BPHYT_RS10260 -2.0 -1.3 hypothetical protein compare
BPHYT_RS29850 -2.0 -0.9 protein tyrosine kinase compare
BPHYT_RS08340 -2.0 -0.5 chemotaxis protein CheY compare
BPHYT_RS10760 -2.0 -3.0 major facilitator transporter compare
BPHYT_RS14855 -2.0 -0.8 ADP-L-glycero-D-manno-heptose-6-epimerase compare
BPHYT_RS09825 -2.0 -1.1 Fe-S protein compare
BPHYT_RS22215 -2.0 -1.7 hypothetical protein compare
BPHYT_RS03640 -2.0 -2.1 phosphoribosylformylglycinamidine cyclo-ligase compare
BPHYT_RS24505 -2.0 -2.5 glyoxalase compare
BPHYT_RS05290 -1.9 -0.6 hypothetical protein compare
BPHYT_RS23455 -1.9 -0.9 phosphorylase compare
BPHYT_RS16025 -1.9 -2.4 Kynurenine formamidase, bacterial (EC 3.5.1.9) (from data) compare
BPHYT_RS30610 -1.9 -1.3 major facilitator transporter compare
BPHYT_RS34565 -1.9 -1.6 chemotaxis protein compare
BPHYT_RS07325 -1.9 -0.4 GntR family transcriptional regulator compare
BPHYT_RS03280 -1.9 -0.6 mannose-1-phosphate guanylyltransferase compare
BPHYT_RS34895 -1.9 -2.9 endonuclease compare
BPHYT_RS29485 -1.9 -1.5 phosphonate ABC transporter ATP-binding protein compare
BPHYT_RS03170 -1.9 -0.7 membrane protein compare
BPHYT_RS32260 -1.9 -0.6 hypothetical protein compare
BPHYT_RS36275 -1.9 -1.1 hypothetical protein compare
BPHYT_RS32150 -1.9 -1.3 hypothetical protein compare
BPHYT_RS04005 -1.9 -1.8 GDP-L-fucose synthase compare
BPHYT_RS11900 -1.8 -1.4 LysR family transcriptional regulator compare
BPHYT_RS25340 -1.8 -1.3 sulfatase compare
BPHYT_RS35250 -1.8 -1.6 alcohol dehydrogenase compare
BPHYT_RS02965 -1.8 -0.9 membrane protein compare
BPHYT_RS21350 -1.8 -1.4 ADP-glucose pyrophosphorylase compare
BPHYT_RS22910 -1.8 -0.4 hypothetical protein compare
BPHYT_RS10850 -1.8 -0.9 LysR family transcriptional regulator compare
BPHYT_RS02480 -1.8 -1.1 alkaline phosphatase compare
BPHYT_RS02765 -1.7 -0.7 cytochrome BD oxidase subunit I compare
BPHYT_RS13130 -1.7 -0.7 metallophosphatase compare
BPHYT_RS19610 -1.7 -0.9 general secretion pathway protein GspC compare
BPHYT_RS23315 -1.7 -0.8 hypothetical protein compare
BPHYT_RS07605 -1.7 -1.8 hypothetical protein compare
BPHYT_RS01115 -1.7 -1.4 hypothetical protein compare
BPHYT_RS36525 -1.7 -1.1 hypothetical protein compare
BPHYT_RS27800 -1.7 -1.5 esterase compare
BPHYT_RS27125 -1.7 -0.9 hypothetical protein compare
BPHYT_RS24655 -1.7 -1.0 amino acid ABC transporter substrate-binding protein compare
BPHYT_RS16290 -1.7 -0.9 hypothetical protein compare
BPHYT_RS17525 -1.7 -1.2 glutaredoxin compare
BPHYT_RS17920 -1.7 -1.0 protein CyaY compare
BPHYT_RS03130 -1.7 -1.8 hypothetical protein compare
BPHYT_RS18985 -1.6 -1.9 hypothetical protein compare
BPHYT_RS20570 -1.6 -2.6 heptosyltransferase compare
BPHYT_RS06775 -1.6 -1.9 nucleotide-binding protein compare
BPHYT_RS24430 -1.6 -2.2 type VI secretion protein ImpA compare
BPHYT_RS33230 -1.6 -2.4 amino acid permease compare
BPHYT_RS34805 -1.6 -4.1 ABC transporter compare
BPHYT_RS29110 -1.6 -2.1 DNA-directed DNA polymerase compare
BPHYT_RS15075 -1.6 -0.6 dihydrokaempferol 4-reductase compare
BPHYT_RS22100 -1.6 -2.8 ribonuclease BN compare
BPHYT_RS25545 -1.6 -2.0 hypothetical protein compare
BPHYT_RS33070 -1.6 -2.5 haloacid dehalogenase compare
BPHYT_RS22330 -1.6 -1.4 PhoB family transcriptional regulator compare
BPHYT_RS04955 -1.6 -1.6 methionyl-tRNA synthetase compare
BPHYT_RS13325 -1.6 -1.3 TetR family transcriptional regulator compare
BPHYT_RS28405 -1.6 -2.2 membrane protein compare
BPHYT_RS09260 -1.6 -2.4 histidine kinase compare
BPHYT_RS17835 -1.6 -2.7 protein tyrosine phosphatase compare
BPHYT_RS14245 -1.5 -0.5 membrane protein compare
BPHYT_RS25585 -1.5 -1.1 membrane protein compare
BPHYT_RS36010 -1.5 -2.2 hypothetical protein compare
BPHYT_RS06490 -1.5 -2.6 membrane protein compare
BPHYT_RS08565 -1.5 -0.5 dihydroorotate dehydrogenase compare
BPHYT_RS25480 -1.5 -1.5 hypothetical protein compare
BPHYT_RS10215 -1.5 -0.7 sulfate transporter compare
BPHYT_RS03375 -1.5 -1.0 NAD(P) transhydrogenase compare
BPHYT_RS36035 -1.5 -1.2 hypothetical protein compare
BPHYT_RS16265 -1.5 -3.2 hypothetical protein compare
BPHYT_RS04965 -1.5 -4.4 ATP-binding protein compare
BPHYT_RS06320 -1.5 -0.9 chemotaxis protein CheY compare
BPHYT_RS30485 -1.5 -0.9 ABC transporter ATP-binding protein compare
BPHYT_RS17095 -1.5 -1.6 proline--tRNA ligase compare
BPHYT_RS30665 -1.5 -1.6 peroxidase compare
BPHYT_RS13245 -1.5 -3.1 hypothetical protein compare
BPHYT_RS33850 -1.5 -0.5 sporulation protein compare
BPHYT_RS08680 -1.5 -1.0 hypothetical protein compare
BPHYT_RS17035 -1.5 -0.9 sugar kinase compare
BPHYT_RS28360 -1.5 -0.7 carboxymuconolactone decarboxylase compare
BPHYT_RS08645 -1.4 -0.9 sulfonate ABC transporter compare
BPHYT_RS03215 -1.4 -1.8 TetR family transcriptional regulator compare
BPHYT_RS14060 -1.4 -0.7 peptidase M23 compare
BPHYT_RS29540 -1.4 -0.6 aldolase compare


Specific Phenotypes

For 3 genes in this experiment