Experiment set28IT039 for Burkholderia phytofirmans PsJN

Compare to:

No phage control

200 most important genes:

  gene name fitness t score description  
BPHYT_RS24315 -3.8 -1.9 phosphoribosyltransferase compare
BPHYT_RS13390 -3.4 -1.0 IclR family transcriptional regulator compare
BPHYT_RS36385 -3.0 -0.9 TetR family transcriptional regulator compare
BPHYT_RS16180 -2.8 -0.8 TetR family transcriptional regulator compare
BPHYT_RS30140 -2.7 -1.2 3-methylitaconate isomerase compare
BPHYT_RS18910 -2.7 -1.8 FlgN compare
BPHYT_RS04370 -2.7 -0.8 glycosyl transferase compare
BPHYT_RS01485 -2.6 -1.6 histidine kinase compare
BPHYT_RS25335 -2.6 -1.1 hypothetical protein compare
BPHYT_RS19610 -2.5 -1.5 general secretion pathway protein GspC compare
BPHYT_RS20545 -2.4 -2.0 hypothetical protein compare
BPHYT_RS16710 -2.3 -0.7 LysR family transcriptional regulator compare
BPHYT_RS29320 -2.2 -1.3 histidine kinase compare
BPHYT_RS14855 -2.2 -1.1 ADP-L-glycero-D-manno-heptose-6-epimerase compare
BPHYT_RS01630 -2.2 -1.8 ATP-dependent protease ATPase subunit HslU compare
BPHYT_RS36440 -2.1 -1.6 hypothetical protein compare
BPHYT_RS08525 -2.1 -0.9 SAM-dependent methyltransferase compare
BPHYT_RS02860 -2.1 -0.6 membrane protein compare
BPHYT_RS10540 -2.1 -1.2 secretion protein compare
BPHYT_RS10095 -2.1 -1.4 integrase compare
BPHYT_RS26280 -2.1 -2.4 hypothetical protein compare
BPHYT_RS36355 -1.9 -1.4 hypothetical protein compare
BPHYT_RS32150 -1.9 -2.0 hypothetical protein compare
BPHYT_RS30610 -1.9 -2.4 major facilitator transporter compare
BPHYT_RS18760 -1.9 -1.9 flagellar biosynthesis protein FliT compare
BPHYT_RS21460 -1.9 -1.8 UDP-N-acetylglucosamine 2-epimerase compare
BPHYT_RS11155 -1.8 -0.9 hypothetical protein compare
BPHYT_RS34085 -1.8 -2.1 polyamine ABC transporter permease compare
BPHYT_RS26925 -1.8 -1.3 NIPSNAP family containing protein compare
BPHYT_RS09280 -1.8 -0.9 pyridoxal-5'-phosphate-dependent protein subunit beta compare
BPHYT_RS26470 -1.8 -0.9 MFS transporter compare
BPHYT_RS16555 -1.8 -3.4 cation transporter compare
BPHYT_RS29745 -1.7 -2.0 phosphonopyruvate decarboxylase compare
BPHYT_RS33850 -1.7 -0.7 sporulation protein compare
BPHYT_RS24955 -1.7 -1.6 cytochrome C peroxidase compare
BPHYT_RS12280 -1.7 -1.2 RNA helicase compare
BPHYT_RS13935 -1.7 -1.5 mannosyltransferase compare
BPHYT_RS32860 -1.6 -1.0 hypothetical protein compare
BPHYT_RS09695 -1.6 -1.7 hypothetical protein compare
BPHYT_RS36275 -1.6 -1.1 hypothetical protein compare
BPHYT_RS12510 -1.6 -1.6 RNA-binding protein compare
BPHYT_RS07320 -1.6 -0.9 dihydrodipicolinate synthetase compare
BPHYT_RS21385 -1.6 -1.5 short-chain dehydrogenase compare
BPHYT_RS26685 -1.6 -0.9 precorrin-8X methylmutase compare
BPHYT_RS05870 -1.6 -3.0 hypothetical protein compare
BPHYT_RS21620 -1.5 -1.2 GCN5 family acetyltransferase compare
BPHYT_RS11635 -1.5 -0.6 RNA polymerase subunit sigma-24 compare
BPHYT_RS12265 -1.5 -1.2 alanine acetyltransferase compare
BPHYT_RS11310 -1.5 -1.0 LysR family transcriptional regulator compare
BPHYT_RS03170 -1.5 -0.9 membrane protein compare
BPHYT_RS09655 -1.4 -3.5 mechanosensitive ion channel protein MscS compare
BPHYT_RS10125 -1.4 -1.3 hypothetical protein compare
BPHYT_RS02285 -1.4 -4.9 cell division protein compare
BPHYT_RS09755 -1.4 -1.3 glycosyl transferase family 1 compare
BPHYT_RS02765 -1.4 -1.0 cytochrome BD oxidase subunit I compare
BPHYT_RS23100 -1.4 -1.7 sugar ABC transporter substrate-binding protein compare
BPHYT_RS22455 -1.3 -0.8 phosphonate ABC transporter substrate-binding protein compare
BPHYT_RS10120 -1.3 -2.0 membrane protein compare
BPHYT_RS17035 -1.3 -1.2 sugar kinase compare
BPHYT_RS10165 -1.3 -0.5 transcriptional regulator compare
BPHYT_RS19335 -1.3 -1.5 hypothetical protein compare
BPHYT_RS05845 -1.3 -2.5 hypothetical protein compare
BPHYT_RS01975 -1.3 -1.3 hypothetical protein compare
BPHYT_RS29870 -1.3 -1.2 2-dehydropantoate 2-reductase compare
BPHYT_RS29810 -1.3 -0.9 hexapeptide transferase compare
BPHYT_RS36055 -1.3 -1.5 hypothetical protein compare
BPHYT_RS22940 -1.2 -1.0 pilus assembly protein TadE compare
BPHYT_RS01425 -1.2 -2.1 3-phosphoglycerate dehydrogenase compare
BPHYT_RS12615 -1.2 -0.5 dihydrodipicolinate synthase compare
BPHYT_RS09620 -1.2 -1.1 aminodeoxychorismate lyase compare
BPHYT_RS28485 -1.2 -0.5 GntR family transcriptional regulator compare
BPHYT_RS28955 -1.2 -1.2 hypothetical protein compare
BPHYT_RS31830 -1.2 -2.0 hypothetical protein compare
BPHYT_RS27030 -1.2 -0.9 transcriptional regulator compare
BPHYT_RS18610 -1.2 -4.3 lytic transglycosylase compare
BPHYT_RS11745 -1.2 -0.6 (2Fe-2S)-binding protein compare
BPHYT_RS05625 -1.2 -2.2 hypothetical protein compare
BPHYT_RS23395 -1.2 -1.2 glycosyl transferase compare
BPHYT_RS14920 -1.2 -2.3 hypothetical protein compare
BPHYT_RS03375 -1.2 -1.2 NAD(P) transhydrogenase compare
BPHYT_RS31900 -1.2 -1.8 short-chain dehydrogenase/reductase SDR compare
BPHYT_RS28470 -1.2 -0.8 hypothetical protein compare
BPHYT_RS11400 -1.2 -1.2 hypothetical protein compare
BPHYT_RS07140 -1.1 -2.2 hypothetical protein compare
BPHYT_RS09100 -1.1 -2.8 stationary phase survival protein SurE compare
BPHYT_RS26115 -1.1 -1.4 polysaccharide deacetylase compare
BPHYT_RS07335 -1.1 -2.5 nitrate ABC transporter permease compare
BPHYT_RS06975 -1.1 -0.7 glutamate racemase compare
BPHYT_RS35675 -1.1 -1.4 short-chain dehydrogenase compare
BPHYT_RS03685 -1.1 -1.4 Tol system periplasmic component YbgF compare
BPHYT_RS02930 -1.1 -1.3 KpsF/GutQ family protein compare
BPHYT_RS22930 -1.1 -0.8 type II secretion system protein compare
BPHYT_RS10440 -1.1 -2.9 GntR family transcriptional regulator compare
BPHYT_RS17240 -1.1 -0.4 cell division protein FtsW compare
BPHYT_RS02600 -1.1 -1.1 glutaredoxin compare
BPHYT_RS26820 -1.0 -0.7 LysR family transcriptional regulator compare
BPHYT_RS20325 -1.0 -2.7 acyl-CoA dehydrogenase compare
BPHYT_RS26080 -1.0 -0.6 ABC transporter ATPase compare
BPHYT_RS27495 -1.0 -0.5 hypothetical protein compare
BPHYT_RS07400 -1.0 -1.4 hypothetical protein compare
BPHYT_RS03645 -1.0 -0.8 tRNA dimethylallyltransferase compare
BPHYT_RS10435 -1.0 -1.5 ThiJ/PfpI domain-containing protein compare
BPHYT_RS11915 -1.0 -2.0 hypothetical protein compare
BPHYT_RS16250 -1.0 -0.8 N5-carboxyaminoimidazole ribonucleotide mutase compare
BPHYT_RS10395 -1.0 -1.2 sulfonate ABC transporter compare
BPHYT_RS25770 -1.0 -0.8 hypothetical protein compare
BPHYT_RS06950 -1.0 -1.6 LysR family transcriptional regulator compare
BPHYT_RS31110 -1.0 -1.2 hypothetical protein compare
BPHYT_RS12925 -1.0 -0.5 exodeoxyribonuclease III compare
BPHYT_RS20570 -1.0 -2.3 heptosyltransferase compare
BPHYT_RS31540 -1.0 -2.6 chloride channel protein compare
BPHYT_RS23570 -1.0 -1.8 chemotaxis protein CheY compare
BPHYT_RS27860 -1.0 -1.1 membrane protein compare
BPHYT_RS31815 -1.0 -1.9 hypothetical protein compare
BPHYT_RS31515 -0.9 -1.9 agmatinase compare
BPHYT_RS30340 -0.9 -1.1 AraC family transcriptional regulator compare
BPHYT_RS36220 -0.9 -0.6 hypothetical protein compare
BPHYT_RS16445 -0.9 -1.5 RNA helicase compare
BPHYT_RS05285 -0.9 -0.8 hypothetical protein compare
BPHYT_RS33355 -0.9 -1.7 oxalyl-CoA decarboxylase compare
BPHYT_RS17440 -0.9 -1.8 hypothetical protein compare
BPHYT_RS25815 -0.9 -1.2 deoxyribose-phosphate aldolase compare
BPHYT_RS26815 -0.9 -1.8 1-aminocyclopropane-1-carboxylate deaminase compare
BPHYT_RS03400 -0.9 -0.4 ATP-dependent DNA helicase RecG compare
BPHYT_RS20155 -0.9 -0.6 hypothetical protein compare
BPHYT_RS01095 -0.9 -0.7 hypothetical protein compare
BPHYT_RS28280 -0.9 -1.2 hypothetical protein compare
BPHYT_RS24285 -0.9 -1.0 TetR family transcriptional regulator compare
BPHYT_RS10590 -0.9 -1.8 hypothetical protein compare
BPHYT_RS26330 -0.9 -1.5 hypothetical protein compare
BPHYT_RS24500 -0.9 -0.8 histidine kinase compare
BPHYT_RS31890 -0.9 -1.0 transposase compare
BPHYT_RS32815 -0.9 -1.1 sugar ABC transporter compare
BPHYT_RS05175 -0.9 -1.5 hypothetical protein compare
BPHYT_RS25875 -0.9 -0.7 type III secretion protein compare
BPHYT_RS11020 -0.9 -1.7 transporter compare
BPHYT_RS28910 -0.9 -1.0 diguanylate phosphodiesterase compare
BPHYT_RS19660 -0.9 -1.0 hypothetical protein compare
BPHYT_RS25410 -0.9 -1.3 porin compare
BPHYT_RS19545 -0.9 -2.3 nuclear protein SET compare
BPHYT_RS34805 -0.9 -3.4 ABC transporter compare
BPHYT_RS02770 -0.9 -1.7 membrane protein compare
BPHYT_RS16195 -0.9 -1.6 carbon monoxide dehydrogenase subunit G compare
BPHYT_RS01760 -0.8 -2.4 carbon-monoxide dehydrogenase compare
BPHYT_RS26660 -0.8 -1.4 precorrin-4 C11-methyltransferase compare
BPHYT_RS26525 -0.8 -0.6 amino acid ABC transporter substrate-binding protein compare
BPHYT_RS31125 -0.8 -1.7 hypothetical protein compare
BPHYT_RS36470 -0.8 -0.6 hypothetical protein compare
BPHYT_RS31150 -0.8 -1.8 transcriptional regulator compare
BPHYT_RS08545 -0.8 -1.1 oxidoreductase compare
BPHYT_RS10475 -0.8 -1.0 mammalian cell entry protein compare
BPHYT_RS08150 -0.8 -0.5 membrane protein compare
BPHYT_RS27950 -0.8 -2.3 dihydroxyacetone kinase compare
BPHYT_RS10300 -0.8 -1.6 racemase compare
BPHYT_RS20235 -0.8 -1.7 iron ABC transporter compare
BPHYT_RS33460 -0.8 -0.7 protocatechuate 3,4-dioxygenase subunit alpha compare
BPHYT_RS29110 -0.8 -1.3 DNA-directed DNA polymerase compare
BPHYT_RS21195 -0.8 -1.8 hypothetical protein compare
BPHYT_RS20245 -0.8 -1.7 iron ABC transporter substrate-binding protein compare
BPHYT_RS28870 -0.8 -1.0 MarR family transcriptional regulator compare
BPHYT_RS31040 -0.8 -1.2 sugar transporter compare
BPHYT_RS20725 -0.8 -0.9 histidine kinase compare
BPHYT_RS32395 -0.8 -0.6 hypothetical protein compare
BPHYT_RS06995 -0.8 -2.4 multidrug DMT transporter permease compare
BPHYT_RS35405 -0.8 -1.4 hypothetical protein compare
BPHYT_RS10400 -0.8 -0.7 taurine ABC transporter permease compare
BPHYT_RS36215 -0.8 -1.3 hypothetical protein compare
BPHYT_RS32750 -0.8 -0.6 lipoprotein compare
BPHYT_RS29515 -0.8 -2.1 spermidine/putrescine ABC transporter substrate-binding protein compare
BPHYT_RS07860 -0.8 -1.1 benzoate 1,2-dioxygenase subunit beta compare
BPHYT_RS04430 -0.8 -0.9 amino acid ABC transporter ATPase compare
BPHYT_RS17640 -0.8 -0.8 2-alkenal reductase compare
BPHYT_RS21235 -0.8 -1.2 hypothetical protein compare
BPHYT_RS27715 -0.8 -1.1 UspA domain-containing protein compare
BPHYT_RS01530 -0.8 -1.7 penicillin-binding protein 2 compare
BPHYT_RS13325 -0.8 -1.2 TetR family transcriptional regulator compare
BPHYT_RS29545 -0.8 -1.2 osmotically inducible protein C compare
BPHYT_RS26050 -0.8 -1.7 ABC transporter permease compare
BPHYT_RS29450 -0.8 -0.9 phosphonate metabolism protein compare
BPHYT_RS24205 -0.8 -1.7 aldolase compare
BPHYT_RS25780 -0.8 -0.2 DeoR faimly transcriptional regulator compare
BPHYT_RS28885 -0.8 -0.9 betaine-aldehyde dehydrogenase compare
BPHYT_RS10645 -0.8 -0.5 cyanate hydratase compare
BPHYT_RS11805 -0.8 -0.8 hypothetical protein compare
BPHYT_RS25015 -0.8 -1.4 XRE family transcriptional regulator compare
BPHYT_RS35975 -0.8 -2.5 Xre family transcriptional regulator compare
BPHYT_RS18515 -0.8 -1.6 hypothetical protein compare
BPHYT_RS22750 -0.8 -1.5 Flagellar brake protein YcgR 2 compare
BPHYT_RS05900 -0.8 -1.5 hypothetical protein compare
BPHYT_RS23990 -0.8 -0.5 N-hydroxyarylamine O-acetyltransferase compare
BPHYT_RS28405 -0.8 -1.8 membrane protein compare
BPHYT_RS11110 -0.8 -1.7 chemotaxis protein CheY compare
BPHYT_RS33155 -0.8 -1.1 hypothetical protein compare
BPHYT_RS11000 -0.8 -1.2 glutathione S-transferase compare
BPHYT_RS07760 -0.8 -1.2 diguanylate phosphodiesterase compare
BPHYT_RS36025 -0.8 -1.7 hypothetical protein compare
BPHYT_RS20665 -0.7 -0.7 LysR family transcriptional regulator compare
BPHYT_RS29100 -0.7 -0.6 ketosteroid isomerase compare
BPHYT_RS19985 -0.7 -0.6 CoA-transferase compare
BPHYT_RS29185 -0.7 -0.9 sugar ABC transporter permease compare


Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in no phage control experiments