Experiment set27S438 for Pseudomonas fluorescens SBW25-INTG

Compare to:

4-Guanidinobutyric acid carbon source

200 most important genes:

  gene name fitness t score description  
PFLU_RS28695 -4.9 -9.4 phosphoglycerate dehydrogenase compare
PFLU_RS00915 -4.6 -14.1 4-aminobutyrate--2-oxoglutarate transaminase compare
PFLU_RS28535 -4.5 -16.5 dihydroxy-acid dehydratase compare
PFLU_RS02490 -4.5 -15.8 phosphoserine phosphatase SerB compare
PFLU_RS27370 -4.5 -14.3 anthranilate phosphoribosyltransferase compare
PFLU_RS20565 -4.3 -15.4 3-isopropylmalate dehydrogenase compare
PFLU_RS25640 -4.3 -14.0 ketol-acid reductoisomerase compare
PFLU_RS12975 -4.3 -5.0 DUF934 domain-containing protein compare
PFLU_RS20580 -4.2 -13.1 3-isopropylmalate dehydratase large subunit compare
PFLU_RS08165 -4.2 -2.9 acyl carrier protein compare
PFLU_RS04465 -4.1 -11.4 ATP phosphoribosyltransferase compare
PFLU_RS02590 -4.1 -10.2 ATP phosphoribosyltransferase regulatory subunit compare
PFLU_RS24765 -4.0 -24.5 2-isopropylmalate synthase compare
PFLU_RS25360 -4.0 -10.2 glutamate 5-kinase compare
PFLU_RS28390 -3.9 -13.3 methionine biosynthesis protein MetW compare
PFLU_RS01900 -3.9 -6.5 phosphoribosyl-AMP cyclohydrolase compare
PFLU_RS22835 -3.9 -7.9 amidotransferase compare
PFLU_RS27365 -3.9 -12.4 indole-3-glycerol phosphate synthase TrpC compare
PFLU_RS28165 -3.9 -12.7 methylenetetrahydrofolate reductase [NAD(P)H] compare
PFLU_RS28645 -3.9 -20.0 phosphoenolpyruvate--protein phosphotransferase compare
PFLU_RS20510 -3.9 -15.5 O-succinylhomoserine sulfhydrylase compare
PFLU_RS23065 -3.9 -10.8 phosphate acyltransferase PlsX compare
PFLU_RS22120 -3.8 -14.7 agmatinase conserved
PFLU_RS29515 -3.8 -14.7 RidA family protein compare
PFLU_RS03970 -3.8 -12.9 carboxylating nicotinate-nucleotide diphosphorylase compare
PFLU_RS08675 -3.8 -5.1 DsbE family thiol:disulfide interchange protein compare
PFLU_RS28385 -3.8 -16.7 homoserine O-acetyltransferase compare
PFLU_RS20540 -3.8 -12.7 phosphoribosylanthranilate isomerase compare
PFLU_RS22115 -3.7 -18.7 LysR family transcriptional regulator conserved
PFLU_RS24025 -3.7 -13.8 quinolinate synthase NadA compare
PFLU_RS01620 -3.7 -8.9 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
PFLU_RS00180 -3.7 -7.5 tryptophan synthase subunit beta compare
PFLU_RS13120 -3.7 -2.5 hypothetical protein compare
PFLU_RS01610 -3.6 -10.5 imidazole glycerol phosphate synthase subunit HisH compare
PFLU_RS23070 -3.6 -1.9 50S ribosomal protein L32 compare
PFLU_RS29780 -3.6 -8.6 acyl-CoA thioesterase compare
PFLU_RS28655 -3.5 -13.6 HAD family hydrolase compare
PFLU_RS01605 -3.5 -9.2 imidazoleglycerol-phosphate dehydratase HisB compare
PFLU_RS03240 -3.4 -16.7 copper-translocating P-type ATPase compare
PFLU_RS00175 -3.4 -7.9 tryptophan synthase subunit alpha compare
PFLU_RS04470 -3.4 -12.1 histidinol dehydrogenase compare
PFLU_RS20575 -3.4 -8.0 3-isopropylmalate dehydratase small subunit compare
PFLU_RS18505 -3.4 -8.1 uroporphyrinogen-III C-methyltransferase compare
PFLU_RS12980 -3.3 -9.2 nitrite/sulfite reductase compare
PFLU_RS27440 -3.3 -6.6 nucleotidyltransferase family protein compare
PFLU_RS08665 -3.2 -6.4 cytochrome c maturation protein CcmE compare
PFLU_RS08670 -3.2 -8.4 heme lyase CcmF/NrfE family subunit compare
PFLU_RS22075 -3.2 -14.5 DUF3108 domain-containing protein compare
PFLU_RS06055 -3.2 -3.7 chemotaxis response regulator protein-glutamate methylesterase compare
PFLU_RS01895 -3.1 -8.1 phosphoribosyl-ATP diphosphatase compare
PFLU_RS08650 -3.0 -3.5 heme exporter protein CcmB compare
PFLU_RS18530 -2.9 -3.9 DNA translocase FtsK compare
PFLU_RS14805 -2.8 -2.8 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
PFLU_RS08660 -2.8 -4.5 heme exporter protein CcmD compare
PFLU_RS18675 -2.8 -1.9 NADH-quinone oxidoreductase subunit NuoN compare
PFLU_RS13350 -2.8 -2.2 ParD-like family protein compare
PFLU_RS29095 -2.8 -22.6 polyphosphate kinase 1 compare
PFLU_RS07650 -2.8 -15.8 fatty acid oxidation complex subunit alpha FadB compare
PFLU_RS28370 -2.8 -9.6 YggS family pyridoxal phosphate-dependent enzyme compare
PFLU_RS08655 -2.7 -4.5 heme ABC transporter permease compare
PFLU_RS27445 -2.7 -16.6 phosphotransferase compare
PFLU_RS25750 -2.7 -3.7 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
PFLU_RS02365 -2.7 -13.5 glycosyltransferase compare
PFLU_RS27305 -2.6 -11.7 anhydro-N-acetylmuramic acid kinase compare
PFLU_RS22740 -2.6 -4.6 phosphoadenylyl-sulfate reductase compare
PFLU_RS03765 -2.6 -13.0 sulfate adenylyltransferase subunit CysD compare
PFLU_RS07225 -2.6 -17.6 L-aspartate oxidase compare
PFLU_RS29760 -2.6 -10.9 phosphate ABC transporter permease PstA compare
PFLU_RS02370 -2.5 -10.5 glycosyltransferase compare
PFLU_RS18665 -2.5 -3.0 NADH-quinone oxidoreductase subunit L compare
PFLU_RS20515 -2.5 -4.7 amidophosphoribosyltransferase compare
PFLU_RS28690 -2.4 -14.7 FAD-binding oxidoreductase compare
PFLU_RS08065 -2.4 -8.7 N-acetylmuramic acid 6-phosphate phosphatase MupP compare
PFLU_RS23220 -2.4 -5.3 tRNA-Arg compare
PFLU_RS07695 -2.3 -4.5 beta-N-acetylhexosaminidase compare
PFLU_RS24085 -2.3 -3.1 Holliday junction branch migration DNA helicase RuvB compare
PFLU_RS22735 -2.3 -11.5 bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH compare
PFLU_RS18420 -2.2 -2.9 hypothetical protein compare
PFLU_RS03770 -2.2 -13.4 sulfate adenylyltransferase subunit CysN compare
PFLU_RS09055 -2.2 -2.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
PFLU_RS26905 -2.2 -9.5 transcriptional regulator NrdR compare
PFLU_RS00415 -2.2 -1.5 thiol:disulfide interchange protein DsbA/DsbL compare
PFLU_RS22070 -2.2 -2.5 phosphoribosylglycinamide formyltransferase compare
PFLU_RS04140 -2.1 -2.8 response regulator transcription factor compare
PFLU_RS08505 -2.1 -7.9 protease HtpX compare
PFLU_RS04385 -2.1 -9.7 RNase adapter RapZ compare
PFLU_RS07255 -2.1 -6.2 sulfurtransferase TusA family protein compare
PFLU_RS00910 -2.1 -9.1 NADP-dependent succinate-semialdehyde dehydrogenase compare
PFLU_RS25645 -2.1 -3.0 acetolactate synthase small subunit compare
PFLU_RS21645 -2.1 -10.1 chemotaxis protein CheA compare
PFLU_RS27620 -2.0 -14.2 acyl-CoA dehydrogenase compare
PFLU_RS22105 -2.0 -3.6 cysteine synthase CysM compare
PFLU_RS24090 -2.0 -3.0 Holliday junction branch migration protein RuvA compare
PFLU_RS01625 -2.0 -2.4 imidazole glycerol phosphate synthase subunit HisF compare
PFLU_RS24475 -2.0 -17.1 AmpG family muropeptide MFS transporter compare
PFLU_RS08160 -2.0 -7.3 sugar transferase compare
PFLU_RS13540 -2.0 -2.6 3-phosphoshikimate 1-carboxyvinyltransferase compare
PFLU_RS22095 -2.0 -14.1 GTP diphosphokinase compare
PFLU_RS18635 -2.0 -2.3 NADH-quinone oxidoreductase subunit NuoF compare
PFLU_RS08185 -2.0 -10.9 DegT/DnrJ/EryC1/StrS aminotransferase family protein compare
PFLU_RS17750 -2.0 -4.1 pirin family protein compare
PFLU_RS19175 -1.9 -7.7 trigger factor compare
PFLU_RS23680 -1.9 -12.7 long-chain fatty acid--CoA ligase compare
PFLU_RS19170 -1.9 -4.7 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
PFLU_RS25715 -1.9 -9.9 RNA polymerase-binding protein DksA compare
PFLU_RS30530 -1.9 -8.9 acetyltransferase compare
PFLU_RS18620 -1.9 -2.8 NADH-quinone oxidoreductase subunit B compare
PFLU_RS26640 -1.9 -7.0 septal ring lytic transglycosylase RlpA family protein compare
PFLU_RS01645 -1.9 -8.2 S41 family peptidase compare
PFLU_RS22895 -1.9 -14.5 PLP-dependent aminotransferase family protein compare
PFLU_RS24785 -1.8 -9.4 outer membrane protein assembly factor BamB compare
PFLU_RS18670 -1.8 -1.7 NADH-quinone oxidoreductase subunit M compare
PFLU_RS02355 -1.8 -6.8 GNAT family N-acetyltransferase compare
PFLU_RS18645 -1.8 -1.2 NADH-quinone oxidoreductase subunit NuoH compare
PFLU_RS21425 -1.8 -4.5 lipid A biosynthesis lauroyl acyltransferase compare
PFLU_RS20660 -1.8 -10.6 aspartate/tyrosine/aromatic aminotransferase compare
PFLU_RS07665 -1.8 -3.1 type I DNA topoisomerase compare
PFLU_RS08370 -1.8 -3.6 hypothetical protein compare
PFLU_RS26020 -1.8 -10.8 TetR/AcrR family transcriptional regulator compare
PFLU_RS26635 -1.8 -4.6 D-alanyl-D-alanine carboxypeptidase compare
PFLU_RS04220 -1.7 -8.1 FadR family transcriptional regulator compare
PFLU_RS31490 -1.7 -2.1 hypothetical protein compare
PFLU_RS02565 -1.7 -3.0 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
PFLU_RS29550 -1.7 -7.0 ATP-dependent DNA helicase RecG compare
PFLU_RS27380 -1.7 -9.2 anthranilate synthase component I compare
PFLU_RS13085 -1.7 -4.2 DUF1315 family protein compare
PFLU_RS13010 -1.7 -4.8 Fe-S biogenesis protein NfuA compare
PFLU_RS21640 -1.7 -7.9 chemotaxis response regulator protein-glutamate methylesterase compare
PFLU_RS25800 -1.7 -7.1 tRNA pseudouridine(55) synthase TruB compare
PFLU_RS03645 -1.7 -7.2 tetratricopeptide repeat protein compare
PFLU_RS04565 -1.7 -1.8 TMEM165/GDT1 family protein compare
PFLU_RS26535 -1.7 -7.0 thiamine phosphate synthase compare
PFLU_RS22135 -1.7 -11.5 sodium:solute symporter conserved
PFLU_RS30165 -1.6 -7.5 ParA family protein compare
PFLU_RS26530 -1.6 -11.6 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase compare
PFLU_RS14820 -1.6 -4.8 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
PFLU_RS18615 -1.6 -1.5 NADH-quinone oxidoreductase subunit A compare
PFLU_RS13035 -1.6 -2.4 cobalamin biosynthesis protein CobW compare
PFLU_RS19165 -1.6 -3.6 ATP-dependent Clp protease ATP-binding subunit ClpX compare
PFLU_RS29750 -1.6 -4.8 phosphate signaling complex protein PhoU compare
PFLU_RS03665 -1.6 -5.3 molybdopterin-synthase adenylyltransferase MoeB compare
PFLU_RS24125 -1.6 -1.5 cold-shock protein compare
PFLU_RS23185 -1.5 -9.5 protein-glutamate O-methyltransferase CheR compare
PFLU_RS01320 -1.5 -8.4 phosphoenolpyruvate carboxykinase compare
PFLU_RS25735 -1.5 -1.5 sigma-54-dependent Fis family transcriptional regulator compare
PFLU_RS21300 -1.5 -4.5 cysteine hydrolase compare
PFLU_RS01965 -1.5 -1.4 ATP-dependent protease subunit HslV compare
PFLU_RS25920 -1.5 -2.6 outer membrane protein assembly factor BamE compare
PFLU_RS28965 -1.5 -8.7 5-formyltetrahydrofolate cyclo-ligase compare
PFLU_RS18625 -1.5 -4.9 NADH-quinone oxidoreductase subunit C/D compare
PFLU_RS18640 -1.5 -1.4 NADH-quinone oxidoreductase subunit NuoG compare
PFLU_RS08190 -1.5 -11.3 polysaccharide biosynthesis protein compare
PFLU_RS30505 -1.5 -4.4 hypothetical protein compare
PFLU_RS02275 -1.5 -1.7 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
PFLU_RS27630 -1.5 -5.3 dethiobiotin synthase compare
PFLU_RS27690 -1.5 -2.0 response regulator compare
PFLU_RS02430 -1.5 -10.8 phosphomethylpyrimidine synthase ThiC compare
PFLU_RS13015 -1.5 -4.7 precorrin-4 C(11)-methyltransferase compare
PFLU_RS04430 -1.5 -6.2 ATP-binding cassette domain-containing protein compare
PFLU_RS02990 -1.4 -4.2 precorrin-3B C(17)-methyltransferase compare
PFLU_RS23380 -1.4 -2.2 HAD-IB family hydrolase compare
PFLU_RS08410 -1.4 -5.5 HTH-type transcriptional regulator CysB compare
PFLU_RS22725 -1.4 -2.7 transcriptional regulator compare
PFLU_RS15065 -1.4 -4.3 IclR family transcriptional regulator compare
PFLU_RS27420 -1.4 -2.2 response regulator transcription factor compare
PFLU_RS21775 -1.4 -8.7 flagellar basal body M-ring protein FliF compare
PFLU_RS20520 -1.4 -6.7 colicin V production protein CvpA compare
PFLU_RS26735 -1.4 -5.5 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
PFLU_RS29815 -1.4 -3.3 aspartate ammonia-lyase compare
PFLU_RS08145 -1.4 -5.7 NAD-dependent epimerase/dehydratase family protein compare
PFLU_RS07785 -1.4 -7.8 VacJ family lipoprotein compare
PFLU_RS21820 -1.4 -7.4 flagellin compare
PFLU_RS03610 -1.4 -4.2 redox-regulated ATPase YchF compare
PFLU_RS29275 -1.4 -5.0 DUF484 family protein compare
PFLU_RS21710 -1.4 -5.4 flagellar type III secretion system pore protein FliP compare
PFLU_RS21725 -1.4 -7.6 flagellar motor switch protein FliM compare
PFLU_RS24205 -1.4 -1.7 DNA binding protein compare
PFLU_RS12660 -1.3 -5.4 hypothetical protein compare
PFLU_RS21360 -1.3 -1.7 MarR family transcriptional regulator compare
PFLU_RS16390 -1.3 -1.7 DUF411 domain-containing protein compare
PFLU_RS01485 -1.3 -9.4 cellulase compare
PFLU_RS21705 -1.3 -5.3 flagellar biosynthesis protein FliQ compare
PFLU_RS21965 -1.3 -9.0 transporter compare
PFLU_RS22395 -1.3 -4.6 fumarate/nitrate reduction transcriptional regulator Fnr compare
PFLU_RS28420 -1.3 -7.5 thiazole synthase compare
PFLU_RS08875 -1.3 -1.8 heme-binding protein compare
PFLU_RS02310 -1.3 -3.9 LPS kinase compare
PFLU_RS07245 -1.3 -5.8 DegQ family serine endoprotease compare
PFLU_RS30510 -1.3 -3.9 glycosyltransferase family 4 protein compare
PFLU_RS27475 -1.3 -5.8 symmetrical bis(5'-nucleosyl)-tetraphosphatase compare
PFLU_RS15610 -1.3 -4.2 helix-turn-helix transcriptional regulator compare
PFLU_RS02670 -1.3 -3.8 hypothetical protein compare
PFLU_RS29380 -1.3 -8.2 D-amino acid dehydrogenase compare
PFLU_RS05250 -1.3 -2.4 elongation factor 4 compare
PFLU_RS25755 -1.3 -1.2 pantoate--beta-alanine ligase compare
PFLU_RS25730 -1.3 -8.4 PAS domain S-box protein compare
PFLU_RS27375 -1.3 -3.7 aminodeoxychorismate/anthranilate synthase component II compare
PFLU_RS01615 -1.3 -3.0 DUF2164 domain-containing protein compare
PFLU_RS27650 -1.3 -9.3 biotin synthase BioB compare
PFLU_RS02280 -1.2 -8.1 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase compare


Specific Phenotypes

For 7 genes in this experiment

For carbon source 4-Guanidinobutyric acid in Pseudomonas fluorescens SBW25-INTG

For carbon source 4-Guanidinobutyric acid across organisms