Experiment set27S433 for Pseudomonas fluorescens SBW25-INTG

Compare to:

Xanthosine dihydrate carbon source

200 most important genes:

  gene name fitness t score description  
PFLU_RS20955 -5.3 -1.8 DUF1028 domain-containing protein compare
PFLU_RS03100 -5.3 -1.8 hypothetical protein compare
PFLU_RS06855 -4.9 -2.0 helix-turn-helix transcriptional regulator compare
PFLU_RS25955 -4.3 -2.0 hypothetical protein compare
PFLU_RS05210 -4.3 -2.1 HU family DNA-binding protein compare
PFLU_RS28695 -4.3 -9.9 phosphoglycerate dehydrogenase compare
PFLU_RS07695 -4.1 -2.5 beta-N-acetylhexosaminidase compare
PFLU_RS19665 -4.0 -1.1 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit compare
PFLU_RS04465 -3.9 -9.1 ATP phosphoribosyltransferase compare
PFLU_RS07650 -3.8 -12.0 fatty acid oxidation complex subunit alpha FadB compare
PFLU_RS08865 -3.8 -10.6 hydroxypyruvate isomerase conserved
PFLU_RS27365 -3.8 -11.5 indole-3-glycerol phosphate synthase TrpC compare
PFLU_RS26535 -3.7 -8.7 thiamine phosphate synthase compare
PFLU_RS01895 -3.7 -7.1 phosphoribosyl-ATP diphosphatase compare
PFLU_RS08675 -3.6 -2.5 DsbE family thiol:disulfide interchange protein compare
PFLU_RS31535 -3.6 -1.0 hypothetical protein compare
PFLU_RS25640 -3.6 -13.4 ketol-acid reductoisomerase compare
PFLU_RS31840 -3.6 -1.0 hypothetical protein compare
PFLU_RS25815 -3.5 -2.4 transcription termination/antitermination protein NusA compare
PFLU_RS28535 -3.5 -17.3 dihydroxy-acid dehydratase compare
PFLU_RS24025 -3.5 -12.1 quinolinate synthase NadA compare
PFLU_RS05340 -3.5 -1.6 SDR family NAD(P)-dependent oxidoreductase compare
PFLU_RS21060 -3.5 -4.1 TetR/AcrR family transcriptional regulator compare
PFLU_RS00435 -3.4 -19.0 PAS domain-containing protein compare
PFLU_RS23920 -3.4 -1.5 septation protein A compare
PFLU_RS04470 -3.3 -9.1 histidinol dehydrogenase compare
PFLU_RS29290 -3.3 -2.3 hypothetical protein compare
PFLU_RS21385 -3.3 -14.6 allantoinase PuuE compare
PFLU_RS20370 -3.3 -12.1 ABC transporter permease compare
PFLU_RS08870 -3.3 -14.3 glyoxylate carboligase conserved
PFLU_RS03970 -3.3 -11.7 carboxylating nicotinate-nucleotide diphosphorylase compare
PFLU_RS20360 -3.3 -6.5 ribokinase compare
PFLU_RS28390 -3.3 -11.7 methionine biosynthesis protein MetW compare
PFLU_RS08625 -3.3 -2.2 molybdenum cofactor biosynthesis protein B compare
PFLU_RS17920 -3.2 -1.8 acyltransferase compare
PFLU_RS12975 -3.2 -3.8 DUF934 domain-containing protein compare
PFLU_RS08630 -3.2 -6.4 molybdopterin molybdotransferase MoeA compare
PFLU_RS07255 -3.2 -5.3 sulfurtransferase TusA family protein compare
PFLU_RS02355 -3.2 -7.8 GNAT family N-acetyltransferase compare
PFLU_RS23175 -3.2 -8.7 flagellar basal body rod protein FlgC compare
PFLU_RS02490 -3.1 -14.1 phosphoserine phosphatase SerB compare
PFLU_RS01610 -3.1 -9.7 imidazole glycerol phosphate synthase subunit HisH compare
PFLU_RS25025 -3.1 -2.4 hypothetical protein compare
PFLU_RS22500 -3.1 -13.8 xanthine dehydrogenase small subunit conserved
PFLU_RS23235 -3.1 -1.9 Arc family DNA-binding protein compare
PFLU_RS08505 -3.1 -5.5 protease HtpX compare
PFLU_RS09535 -3.1 -0.9 TIGR03750 family conjugal transfer protein compare
PFLU_RS03995 -3.1 -1.4 hypothetical protein compare
PFLU_RS07765 -3.0 -9.1 cupredoxin family protein compare
PFLU_RS20565 -3.0 -14.8 3-isopropylmalate dehydrogenase compare
PFLU_RS29560 -3.0 -1.2 hypothetical protein compare
PFLU_RS27445 -3.0 -16.7 phosphotransferase compare
PFLU_RS23680 -3.0 -16.3 long-chain fatty acid--CoA ligase compare
PFLU_RS28385 -3.0 -14.1 homoserine O-acetyltransferase compare
PFLU_RS20380 -3.0 -7.5 sugar ABC transporter substrate-binding protein compare
PFLU_RS04945 -2.9 -3.0 molybdopterin synthase catalytic subunit MoaE compare
PFLU_RS07225 -2.9 -16.9 L-aspartate oxidase compare
PFLU_RS20510 -2.9 -13.6 O-succinylhomoserine sulfhydrylase compare
PFLU_RS00530 -2.9 -2.1 DUF2388 domain-containing protein compare
PFLU_RS04385 -2.9 -8.1 RNase adapter RapZ compare
PFLU_RS14195 -2.9 -2.1 hypothetical protein compare
PFLU_RS01900 -2.9 -6.9 phosphoribosyl-AMP cyclohydrolase compare
PFLU_RS28645 -2.9 -14.7 phosphoenolpyruvate--protein phosphotransferase compare
PFLU_RS25360 -2.9 -9.1 glutamate 5-kinase compare
PFLU_RS17950 -2.9 -1.1 hypothetical protein compare
PFLU_RS20580 -2.9 -12.8 3-isopropylmalate dehydratase large subunit compare
PFLU_RS31530 -2.9 -0.8 transposase compare
PFLU_RS28420 -2.9 -8.2 thiazole synthase compare
PFLU_RS23010 -2.9 -11.1 radical SAM protein compare
PFLU_RS21400 -2.9 -10.2 ureidoglycolate lyase compare
PFLU_RS14805 -2.8 -1.1 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
PFLU_RS01910 -2.8 -1.3 sterol-binding protein compare
PFLU_RS24765 -2.8 -18.9 2-isopropylmalate synthase compare
PFLU_RS08670 -2.8 -6.9 heme lyase CcmF/NrfE family subunit compare
PFLU_RS04935 -2.8 -5.0 cyclic pyranopterin monophosphate synthase MoaC compare
PFLU_RS12980 -2.8 -5.6 nitrite/sulfite reductase compare
PFLU_RS08660 -2.8 -3.0 heme exporter protein CcmD compare
PFLU_RS28165 -2.8 -12.4 methylenetetrahydrofolate reductase [NAD(P)H] compare
PFLU_RS00180 -2.8 -8.3 tryptophan synthase subunit beta compare
PFLU_RS20375 -2.8 -14.4 sugar ABC transporter ATP-binding protein compare
PFLU_RS01620 -2.8 -8.6 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
PFLU_RS21640 -2.8 -8.3 chemotaxis response regulator protein-glutamate methylesterase compare
PFLU_RS03765 -2.8 -10.8 sulfate adenylyltransferase subunit CysD compare
PFLU_RS13665 -2.7 -0.8 MarR family transcriptional regulator compare
PFLU_RS22835 -2.7 -8.9 amidotransferase compare
PFLU_RS19555 -2.7 -1.6 histidine phosphatase family protein compare
PFLU_RS26020 -2.7 -12.4 TetR/AcrR family transcriptional regulator compare
PFLU_RS04075 -2.7 -0.8 hypothetical protein compare
PFLU_RS27370 -2.7 -13.2 anthranilate phosphoribosyltransferase compare
PFLU_RS28655 -2.7 -12.6 HAD family hydrolase compare
PFLU_RS29760 -2.7 -8.9 phosphate ABC transporter permease PstA compare
PFLU_RS28310 -2.7 -1.1 response regulator compare
PFLU_RS02365 -2.7 -12.2 glycosyltransferase compare
PFLU_RS16390 -2.7 -1.0 DUF411 domain-containing protein compare
PFLU_RS00175 -2.6 -8.2 tryptophan synthase subunit alpha compare
PFLU_RS15600 -2.6 -3.5 ketoacyl-ACP synthase III compare
PFLU_RS06815 -2.6 -7.5 TetR family transcriptional regulator compare
PFLU_RS02875 -2.6 -4.7 urease subunit gamma compare
PFLU_RS21405 -2.6 -14.6 urate hydroxylase PuuD compare
PFLU_RS01315 -2.6 -1.8 Hsp33 family molecular chaperone HslO compare
PFLU_RS22355 -2.6 -8.0 cytochrome-c oxidase, cbb3-type subunit III compare
PFLU_RS14550 -2.6 -6.6 UTP--glucose-1-phosphate uridylyltransferase GalU compare
PFLU_RS19375 -2.6 -9.8 branched-chain amino acid aminotransferase compare
PFLU_RS22505 -2.6 -16.5 xanthine dehydrogenase molybdopterin binding subunit conserved
PFLU_RS20540 -2.6 -10.5 phosphoribosylanthranilate isomerase compare
PFLU_RS22360 -2.6 -16.7 cytochrome c oxidase accessory protein CcoG compare
PFLU_RS20575 -2.6 -5.2 3-isopropylmalate dehydratase small subunit compare
PFLU_RS03770 -2.5 -13.9 sulfate adenylyltransferase subunit CysN compare
PFLU_RS23205 -2.5 -9.7 flagellar protein FlgN compare
PFLU_RS01605 -2.5 -8.3 imidazoleglycerol-phosphate dehydratase HisB compare
PFLU_RS21770 -2.5 -8.1 flagellar motor switch protein FliG compare
PFLU_RS21380 -2.5 -4.9 hydroxyisourate hydrolase compare
PFLU_RS21765 -2.5 -4.8 flagellar assembly protein FliH compare
PFLU_RS27620 -2.5 -13.2 acyl-CoA dehydrogenase compare
PFLU_RS26545 -2.5 -9.6 sel1 repeat family protein compare
PFLU_RS00210 -2.5 -1.3 OsmC family protein compare
PFLU_RS08685 -2.5 -9.8 c-type cytochrome biogenesis protein CcmI compare
PFLU_RS21845 -2.5 -6.6 flagellar basal body P-ring protein FlgI compare
PFLU_RS31795 -2.4 -4.8 hypothetical protein compare
PFLU_RS08350 -2.4 -1.9 ABC transporter ATP-binding protein compare
PFLU_RS21780 -2.4 -3.9 flagellar hook-basal body complex protein FliE compare
PFLU_RS26530 -2.4 -12.2 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase compare
PFLU_RS21830 -2.4 -15.6 flagellar hook-associated protein 3 compare
PFLU_RS02590 -2.4 -9.1 ATP phosphoribosyltransferase regulatory subunit compare
PFLU_RS23165 -2.4 -14.4 flagellar hook protein FlgE compare
PFLU_RS17060 -2.4 -1.0 monooxygenase compare
PFLU_RS25715 -2.3 -8.6 RNA polymerase-binding protein DksA compare
PFLU_RS27305 -2.3 -6.2 anhydro-N-acetylmuramic acid kinase compare
PFLU_RS31590 -2.3 -1.2 hypothetical protein compare
PFLU_RS29400 -2.3 -1.5 DUF1127 domain-containing protein compare
PFLU_RS27440 -2.3 -6.6 nucleotidyltransferase family protein compare
PFLU_RS18095 -2.3 -2.6 GlxA family transcriptional regulator compare
PFLU_RS10765 -2.3 -8.7 UvrY/SirA/GacA family response regulator transcription factor compare
PFLU_RS21820 -2.3 -11.3 flagellin compare
PFLU_RS23730 -2.3 -12.1 MurR/RpiR family transcriptional regulator compare
PFLU_RS19720 -2.3 -1.2 hypothetical protein compare
PFLU_RS10405 -2.3 -2.3 helix-turn-helix transcriptional regulator compare
PFLU_RS14480 -2.3 -5.9 molybdate ABC transporter permease subunit compare
PFLU_RS21390 -2.3 -8.9 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase compare
PFLU_RS18505 -2.3 -6.5 uroporphyrinogen-III C-methyltransferase compare
PFLU_RS29215 -2.3 -10.5 response regulator transcription factor compare
PFLU_RS21695 -2.3 -5.1 flagellar biosynthesis protein FlhB compare
PFLU_RS18530 -2.3 -3.1 DNA translocase FtsK compare
PFLU_RS25190 -2.3 -1.7 hypothetical protein compare
PFLU_RS17265 -2.3 -1.4 hypothetical protein compare
PFLU_RS19175 -2.3 -3.7 trigger factor compare
PFLU_RS01625 -2.3 -1.2 imidazole glycerol phosphate synthase subunit HisF compare
PFLU_RS08165 -2.3 -1.7 acyl carrier protein compare
PFLU_RS08665 -2.3 -4.8 cytochrome c maturation protein CcmE compare
PFLU_RS21810 -2.3 -15.8 flagellar filament capping protein FliD compare
PFLU_RS29490 -2.2 -8.0 ribonuclease PH compare
PFLU_RS21760 -2.2 -8.9 flagellar protein export ATPase FliI compare
PFLU_RS25750 -2.2 -3.4 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
PFLU_RS21735 -2.2 -7.5 flagellar hook-length control protein FliK compare
PFLU_RS29550 -2.2 -7.9 ATP-dependent DNA helicase RecG compare
PFLU_RS25225 -2.2 -6.0 disulfide bond formation protein B compare
PFLU_RS12800 -2.2 -1.0 amino acid ABC transporter ATP-binding protein compare
PFLU_RS03980 -2.2 -6.9 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
PFLU_RS10340 -2.2 -1.2 hypothetical protein compare
PFLU_RS21795 -2.2 -12.4 sigma-54-dependent Fis family transcriptional regulator compare
PFLU_RS23430 -2.2 -5.3 TetR/AcrR family transcriptional regulator compare
PFLU_RS23195 -2.2 -9.6 flagellar basal body P-ring formation protein FlgA compare
PFLU_RS21700 -2.2 -5.0 flagellar type III secretion system protein FliR compare
PFLU_RS19550 -2.1 -0.7 ABC transporter ATP-binding protein compare
PFLU_RS21850 -2.1 -10.2 flagellar basal body L-ring protein FlgH compare
PFLU_RS27650 -2.1 -11.3 biotin synthase BioB compare
PFLU_RS08760 -2.1 -2.9 phosphonate C-P lyase system protein PhnG compare
PFLU_RS21965 -2.1 -11.8 transporter compare
PFLU_RS04650 -2.1 -11.2 ABC transporter substrate-binding protein compare
PFLU_RS29515 -2.1 -9.5 RidA family protein compare
PFLU_RS21395 -2.1 -6.2 allantoicase compare
PFLU_RS08065 -2.1 -6.9 N-acetylmuramic acid 6-phosphate phosphatase MupP compare
PFLU_RS21660 -2.1 -8.5 RNA polymerase sigma factor FliA compare
PFLU_RS02000 -2.1 -14.2 penicillin-binding protein 1A compare
PFLU_RS21520 -2.1 -2.3 thioesterase compare
PFLU_RS22510 -2.1 -9.9 xanthine dehydrogenase accessory protein XdhC conserved
PFLU_RS08650 -2.1 -1.9 heme exporter protein CcmB compare
PFLU_RS24475 -2.0 -14.5 AmpG family muropeptide MFS transporter compare
PFLU_RS08860 -2.0 -2.6 2-hydroxy-3-oxopropionate reductase compare
PFLU_RS14545 -2.0 -2.0 hypothetical protein compare
PFLU_RS21705 -2.0 -4.7 flagellar biosynthesis protein FliQ compare
PFLU_RS02980 -2.0 -1.2 precorrin-8X methylmutase compare
PFLU_RS07805 -2.0 -11.9 transaldolase compare
PFLU_RS08655 -2.0 -3.8 heme ABC transporter permease compare
PFLU_RS19170 -2.0 -2.3 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
PFLU_RS28965 -2.0 -8.2 5-formyltetrahydrofolate cyclo-ligase compare
PFLU_RS28650 -2.0 -6.0 RNA pyrophosphohydrolase compare
PFLU_RS03240 -2.0 -9.8 copper-translocating P-type ATPase compare
PFLU_RS21675 -2.0 -9.5 flagellar biosynthesis protein FlhA compare
PFLU_RS31425 -2.0 -0.9 hypothetical protein compare
PFLU_RS16300 -2.0 -3.0 hypothetical protein compare
PFLU_RS07320 -1.9 -3.1 hypothetical protein compare
PFLU_RS03665 -1.9 -4.4 molybdopterin-synthase adenylyltransferase MoeB compare
PFLU_RS16120 -1.9 -2.7 TetR/AcrR family transcriptional regulator compare
PFLU_RS21300 -1.9 -4.0 cysteine hydrolase compare
PFLU_RS13580 -1.9 -3.0 ribonucleotide-diphosphate reductase subunit beta compare
PFLU_RS31510 -1.9 -1.3 transcriptional regulator compare
PFLU_RS31330 -1.9 -4.3 hypothetical protein compare
PFLU_RS30160 -1.9 -2.3 ParB/RepB/Spo0J family partition protein compare
PFLU_RS27380 -1.9 -10.0 anthranilate synthase component I compare


Specific Phenotypes

For 22 genes in this experiment

For carbon source Xanthosine in Pseudomonas fluorescens SBW25-INTG

For carbon source Xanthosine across organisms