Experiment set27S399 for Pseudomonas fluorescens SBW25-INTG

Compare to:

L-Malic acid disodium salt monohydrate carbon source

200 most important genes:

  gene name fitness t score description  
PFLU_RS12635 -5.3 -3.6 conjugal transfer protein TraR compare
PFLU_RS02490 -4.6 -14.6 phosphoserine phosphatase SerB compare
PFLU_RS27365 -4.5 -11.1 indole-3-glycerol phosphate synthase TrpC compare
PFLU_RS20510 -4.5 -10.0 O-succinylhomoserine sulfhydrylase compare
PFLU_RS25640 -4.4 -12.5 ketol-acid reductoisomerase compare
PFLU_RS28390 -4.4 -11.1 methionine biosynthesis protein MetW compare
PFLU_RS28385 -4.4 -14.3 homoserine O-acetyltransferase compare
PFLU_RS24765 -4.4 -21.9 2-isopropylmalate synthase compare
PFLU_RS04465 -4.3 -9.7 ATP phosphoribosyltransferase compare
PFLU_RS27370 -4.3 -14.8 anthranilate phosphoribosyltransferase compare
PFLU_RS20565 -4.3 -12.7 3-isopropylmalate dehydrogenase compare
PFLU_RS28535 -4.3 -16.4 dihydroxy-acid dehydratase compare
PFLU_RS00180 -4.2 -5.8 tryptophan synthase subunit beta compare
PFLU_RS20580 -4.2 -11.0 3-isopropylmalate dehydratase large subunit compare
PFLU_RS12975 -4.1 -4.0 DUF934 domain-containing protein compare
PFLU_RS23065 -4.1 -9.1 phosphate acyltransferase PlsX compare
PFLU_RS29515 -4.1 -14.0 RidA family protein compare
PFLU_RS20575 -4.0 -6.7 3-isopropylmalate dehydratase small subunit compare
PFLU_RS28695 -4.0 -10.0 phosphoglycerate dehydrogenase compare
PFLU_RS28420 -4.0 -11.7 thiazole synthase compare
PFLU_RS04470 -3.9 -9.7 histidinol dehydrogenase compare
PFLU_RS20540 -3.9 -10.5 phosphoribosylanthranilate isomerase compare
PFLU_RS03970 -3.9 -12.7 carboxylating nicotinate-nucleotide diphosphorylase compare
PFLU_RS28165 -3.8 -11.6 methylenetetrahydrofolate reductase [NAD(P)H] compare
PFLU_RS02590 -3.8 -10.7 ATP phosphoribosyltransferase regulatory subunit compare
PFLU_RS01605 -3.8 -8.0 imidazoleglycerol-phosphate dehydratase HisB compare
PFLU_RS08410 -3.7 -13.8 HTH-type transcriptional regulator CysB compare
PFLU_RS25360 -3.7 -9.8 glutamate 5-kinase compare
PFLU_RS23115 -3.7 -17.8 dicarboxylate/amino acid:cation symporter compare
PFLU_RS01895 -3.7 -7.4 phosphoribosyl-ATP diphosphatase compare
PFLU_RS01620 -3.6 -7.7 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
PFLU_RS00175 -3.6 -6.0 tryptophan synthase subunit alpha compare
PFLU_RS01610 -3.5 -9.7 imidazole glycerol phosphate synthase subunit HisH compare
PFLU_RS01900 -3.5 -7.1 phosphoribosyl-AMP cyclohydrolase compare
PFLU_RS23070 -3.5 -1.7 50S ribosomal protein L32 compare
PFLU_RS24025 -3.4 -13.5 quinolinate synthase NadA compare
PFLU_RS28655 -3.4 -12.4 HAD family hydrolase compare
PFLU_RS12980 -3.4 -8.3 nitrite/sulfite reductase compare
PFLU_RS26535 -3.3 -8.9 thiamine phosphate synthase compare
PFLU_RS01400 -3.3 -16.1 sigma-54-dependent Fis family transcriptional regulator compare
PFLU_RS18505 -3.3 -5.9 uroporphyrinogen-III C-methyltransferase compare
PFLU_RS07255 -3.2 -6.3 sulfurtransferase TusA family protein compare
PFLU_RS25645 -3.1 -2.1 acetolactate synthase small subunit compare
PFLU_RS20515 -3.0 -2.1 amidophosphoribosyltransferase compare
PFLU_RS25750 -2.9 -2.8 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
PFLU_RS02430 -2.9 -17.6 phosphomethylpyrimidine synthase ThiC compare
PFLU_RS22740 -2.9 -2.8 phosphoadenylyl-sulfate reductase compare
PFLU_RS26530 -2.9 -15.6 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase compare
PFLU_RS23175 -2.9 -7.0 flagellar basal body rod protein FlgC compare
PFLU_RS07225 -2.8 -17.6 L-aspartate oxidase compare
PFLU_RS23310 -2.8 -9.7 arginine/ornithine succinyltransferase subunit alpha compare
PFLU_RS23305 -2.8 -11.1 arginine N-succinyltransferase compare
PFLU_RS01625 -2.8 -1.9 imidazole glycerol phosphate synthase subunit HisF compare
PFLU_RS14810 -2.7 -3.0 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
PFLU_RS27650 -2.7 -15.9 biotin synthase BioB compare
PFLU_RS01315 -2.7 -2.6 Hsp33 family molecular chaperone HslO compare
PFLU_RS23185 -2.7 -12.7 protein-glutamate O-methyltransferase CheR compare
PFLU_RS08490 -2.7 -2.2 DEAD/DEAH box helicase compare
PFLU_RS18530 -2.7 -4.0 DNA translocase FtsK compare
PFLU_RS03665 -2.6 -6.4 molybdopterin-synthase adenylyltransferase MoeB compare
PFLU_RS21615 -2.6 -10.0 chemotaxis protein CheW compare
PFLU_RS23205 -2.6 -11.2 flagellar protein FlgN compare
PFLU_RS06320 -2.6 -3.8 OmpH family outer membrane protein compare
PFLU_RS21705 -2.5 -6.7 flagellar biosynthesis protein FliQ compare
PFLU_RS19720 -2.5 -2.9 hypothetical protein compare
PFLU_RS08665 -2.5 -5.9 cytochrome c maturation protein CcmE compare
PFLU_RS21850 -2.5 -13.0 flagellar basal body L-ring protein FlgH compare
PFLU_RS21805 -2.5 -12.6 flagellar export chaperone FliS compare
PFLU_RS21735 -2.5 -11.9 flagellar hook-length control protein FliK compare
PFLU_RS21810 -2.5 -17.5 flagellar filament capping protein FliD compare
PFLU_RS01320 -2.5 -9.8 phosphoenolpyruvate carboxykinase compare
PFLU_RS08660 -2.5 -3.9 heme exporter protein CcmD compare
PFLU_RS03770 -2.4 -12.9 sulfate adenylyltransferase subunit CysN compare
PFLU_RS03765 -2.4 -11.3 sulfate adenylyltransferase subunit CysD compare
PFLU_RS02980 -2.4 -2.3 precorrin-8X methylmutase compare
PFLU_RS01995 -2.4 -11.5 malate dehydrogenase compare
PFLU_RS05720 -2.4 -12.3 OmpA family protein compare
PFLU_RS13085 -2.4 -4.1 DUF1315 family protein compare
PFLU_RS21830 -2.4 -17.1 flagellar hook-associated protein 3 compare
PFLU_RS27645 -2.3 -13.9 8-amino-7-oxononanoate synthase compare
PFLU_RS24085 -2.3 -2.7 Holliday junction branch migration DNA helicase RuvB compare
PFLU_RS27635 -2.3 -11.4 malonyl-ACP O-methyltransferase BioC compare
PFLU_RS27630 -2.3 -6.8 dethiobiotin synthase compare
PFLU_RS09055 -2.3 -1.6 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
PFLU_RS21645 -2.3 -10.4 chemotaxis protein CheA compare
PFLU_RS21835 -2.3 -13.6 flagellar hook-associated protein FlgK compare
PFLU_RS06055 -2.3 -1.2 chemotaxis response regulator protein-glutamate methylesterase compare
PFLU_RS21855 -2.2 -8.7 flagellar basal-body rod protein FlgG compare
PFLU_RS22735 -2.2 -11.0 bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH compare
PFLU_RS21765 -2.2 -7.6 flagellar assembly protein FliH compare
PFLU_RS28965 -2.2 -9.8 5-formyltetrahydrofolate cyclo-ligase compare
PFLU_RS22070 -2.1 -2.5 phosphoribosylglycinamide formyltransferase compare
PFLU_RS08165 -2.1 -3.0 acyl carrier protein compare
PFLU_RS28195 -2.1 -13.4 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
PFLU_RS21675 -2.1 -13.2 flagellar biosynthesis protein FlhA compare
PFLU_RS02985 -2.1 -11.2 precorrin-2 C(20)-methyltransferase compare
PFLU_RS22095 -2.1 -14.7 GTP diphosphokinase compare
PFLU_RS29095 -2.1 -16.4 polyphosphate kinase 1 compare
PFLU_RS30160 -2.0 -3.3 ParB/RepB/Spo0J family partition protein compare
PFLU_RS07525 -2.0 -2.0 cyclic nucleotide-binding domain-containing protein compare
PFLU_RS21655 -2.0 -6.2 response regulator compare
PFLU_RS23165 -2.0 -13.9 flagellar hook protein FlgE compare
PFLU_RS21820 -2.0 -10.1 flagellin compare
PFLU_RS23195 -2.0 -11.6 flagellar basal body P-ring formation protein FlgA compare
PFLU_RS22105 -2.0 -3.2 cysteine synthase CysM compare
PFLU_RS21795 -2.0 -14.2 sigma-54-dependent Fis family transcriptional regulator compare
PFLU_RS21990 -2.0 -7.7 alpha-ribazole phosphatase family protein compare
PFLU_RS20660 -2.0 -10.6 aspartate/tyrosine/aromatic aminotransferase compare
PFLU_RS21760 -1.9 -10.0 flagellar protein export ATPase FliI compare
PFLU_RS13540 -1.9 -1.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
PFLU_RS14195 -1.9 -2.3 hypothetical protein compare
PFLU_RS14550 -1.9 -6.1 UTP--glucose-1-phosphate uridylyltransferase GalU compare
PFLU_RS26635 -1.9 -4.0 D-alanyl-D-alanine carboxypeptidase compare
PFLU_RS02565 -1.9 -1.3 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
PFLU_RS02975 -1.8 -8.0 precorrin-3B synthase compare
PFLU_RS06855 -1.8 -2.3 helix-turn-helix transcriptional regulator compare
PFLU_RS22075 -1.8 -10.1 DUF3108 domain-containing protein compare
PFLU_RS21710 -1.8 -4.8 flagellar type III secretion system pore protein FliP compare
PFLU_RS21860 -1.8 -5.0 flagellar basal body rod protein FlgF compare
PFLU_RS18665 -1.8 -3.1 NADH-quinone oxidoreductase subunit L compare
PFLU_RS04565 -1.8 -1.7 TMEM165/GDT1 family protein compare
PFLU_RS21985 -1.8 -3.8 adenosylcobinamide-GDP ribazoletransferase compare
PFLU_RS03995 -1.8 -1.6 hypothetical protein compare
PFLU_RS13050 -1.8 -5.7 VWA domain-containing protein compare
PFLU_RS21660 -1.8 -9.3 RNA polymerase sigma factor FliA compare
PFLU_RS27375 -1.8 -5.2 aminodeoxychorismate/anthranilate synthase component II compare
PFLU_RS21640 -1.8 -4.7 chemotaxis response regulator protein-glutamate methylesterase compare
PFLU_RS21755 -1.8 -6.6 flagella biosynthesis chaperone FliJ compare
PFLU_RS15410 -1.8 -2.2 zinc-dependent alcohol dehydrogenase family protein compare
PFLU_RS27380 -1.7 -8.9 anthranilate synthase component I compare
PFLU_RS01965 -1.7 -1.2 ATP-dependent protease subunit HslV compare
PFLU_RS27640 -1.7 -2.0 alpha/beta fold hydrolase compare
PFLU_RS02670 -1.7 -4.3 hypothetical protein compare
PFLU_RS31530 -1.7 -1.1 transposase compare
PFLU_RS30590 -1.7 -1.7 hypothetical protein compare
PFLU_RS24090 -1.7 -3.3 Holliday junction branch migration protein RuvA compare
PFLU_RS21845 -1.7 -6.2 flagellar basal body P-ring protein FlgI compare
PFLU_RS21665 -1.7 -4.7 MinD/ParA family protein compare
PFLU_RS07665 -1.7 -2.8 type I DNA topoisomerase compare
PFLU_RS23920 -1.7 -1.4 septation protein A compare
PFLU_RS21695 -1.7 -5.2 flagellar biosynthesis protein FlhB compare
PFLU_RS21635 -1.6 -4.6 flagellar motor protein compare
PFLU_RS22015 -1.6 -8.8 cobalamin biosynthesis protein compare
PFLU_RS22600 -1.6 -1.9 RNA polymerase sigma factor SigX compare
PFLU_RS13000 -1.6 -10.6 methionine synthase compare
PFLU_RS26565 -1.6 -1.9 rRNA maturation RNase YbeY compare
PFLU_RS08675 -1.6 -4.1 DsbE family thiol:disulfide interchange protein compare
PFLU_RS04315 -1.6 -2.7 rod shape-determining protein MreD compare
PFLU_RS07245 -1.6 -6.6 DegQ family serine endoprotease compare
PFLU_RS07695 -1.6 -3.7 beta-N-acetylhexosaminidase compare
PFLU_RS31290 -1.6 -1.3 EamA family transporter compare
PFLU_RS20715 -1.6 -2.5 iron ABC transporter permease compare
PFLU_RS04475 -1.6 -8.5 histidinol-phosphate transaminase compare
PFLU_RS02990 -1.6 -5.7 precorrin-3B C(17)-methyltransferase compare
PFLU_RS12740 -1.6 -1.8 BcpO-related WXXGXW repeat protein compare
PFLU_RS21775 -1.6 -6.4 flagellar basal body M-ring protein FliF compare
PFLU_RS04140 -1.6 -2.5 response regulator transcription factor compare
PFLU_RS18395 -1.6 -1.0 MotA/TolQ/ExbB proton channel family protein compare
PFLU_RS21780 -1.6 -3.6 flagellar hook-basal body complex protein FliE compare
PFLU_RS13015 -1.6 -4.7 precorrin-4 C(11)-methyltransferase compare
PFLU_RS21725 -1.5 -6.8 flagellar motor switch protein FliM compare
PFLU_RS20765 -1.5 -1.5 hypothetical protein compare
PFLU_RS08670 -1.5 -6.4 heme lyase CcmF/NrfE family subunit compare
PFLU_RS22005 -1.5 -8.3 cobyric acid synthase compare
PFLU_RS22395 -1.5 -5.3 fumarate/nitrate reduction transcriptional regulator Fnr compare
PFLU_RS25715 -1.5 -8.3 RNA polymerase-binding protein DksA compare
PFLU_RS18675 -1.5 -2.7 NADH-quinone oxidoreductase subunit NuoN compare
PFLU_RS14715 -1.5 -6.6 protein-glutamate O-methyltransferase CheR compare
PFLU_RS00535 -1.5 -2.4 DUF1127 domain-containing protein compare
PFLU_RS21670 -1.5 -8.3 flagellar biosynthesis protein FlhF compare
PFLU_RS23180 -1.5 -5.0 flagellar basal body rod protein FlgB compare
PFLU_RS04455 -1.5 -4.2 BolA family transcriptional regulator compare
PFLU_RS04430 -1.5 -5.7 ATP-binding cassette domain-containing protein compare
PFLU_RS18670 -1.5 -1.6 NADH-quinone oxidoreductase subunit M compare
PFLU_RS02970 -1.5 -5.1 bifunctional cobalt-precorrin-7 (C(5))-methyltransferase/cobalt-precorrin-6B (C(15))-methyltransferase compare
PFLU_RS20040 -1.5 -3.1 GntR family transcriptional regulator compare
PFLU_RS01285 -1.5 -1.7 HAMP domain-containing protein compare
PFLU_RS25740 -1.5 -4.5 polynucleotide adenylyltransferase PcnB compare
PFLU_RS19935 -1.4 -1.9 type II secretion system protein GspF compare
PFLU_RS19170 -1.4 -4.0 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
PFLU_RS14020 -1.4 -2.2 hypothetical protein compare
PFLU_RS21840 -1.4 -6.3 flagellar assembly peptidoglycan hydrolase FlgJ compare
PFLU_RS02965 -1.4 -7.1 cobalt-precorrin-6A reductase compare
PFLU_RS25925 -1.4 -2.8 RnfH family protein compare
PFLU_RS14995 -1.4 -2.0 response regulator transcription factor compare
PFLU_RS21700 -1.4 -4.2 flagellar type III secretion system protein FliR compare
PFLU_RS24125 -1.4 -1.8 cold-shock protein compare
PFLU_RS25735 -1.4 -2.0 sigma-54-dependent Fis family transcriptional regulator compare
PFLU_RS08065 -1.3 -6.2 N-acetylmuramic acid 6-phosphate phosphatase MupP compare
PFLU_RS13040 -1.3 -8.4 cobaltochelatase subunit CobN compare
PFLU_RS19175 -1.3 -5.9 trigger factor compare
PFLU_RS10430 -1.3 -3.9 peptidase compare
PFLU_RS01615 -1.3 -2.3 DUF2164 domain-containing protein compare
PFLU_RS07235 -1.3 -3.0 sigma factor AlgU negative regulatory protein compare
PFLU_RS13010 -1.3 -3.5 Fe-S biogenesis protein NfuA compare
PFLU_RS11980 -1.3 -4.5 precorrin-6A synthase (deacetylating) compare
PFLU_RS29550 -1.3 -5.7 ATP-dependent DNA helicase RecG compare
PFLU_RS03585 -1.3 -1.3 hypothetical protein compare
PFLU_RS25755 -1.3 -0.9 pantoate--beta-alanine ligase compare
PFLU_RS30070 -1.3 -2.8 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source L-Malic acid disodium salt monohydrate in Pseudomonas fluorescens SBW25-INTG

For carbon source L-Malic acid disodium salt monohydrate across organisms