Experiment set27S395 for Pseudomonas fluorescens SBW25-INTG

Compare to:

D,L-Malic Acid carbon source

200 most important genes:

  gene name fitness t score description  
PFLU_RS27365 -5.2 -7.9 indole-3-glycerol phosphate synthase TrpC compare
PFLU_RS20575 -5.0 -3.4 3-isopropylmalate dehydratase small subunit compare
PFLU_RS03970 -4.8 -9.3 carboxylating nicotinate-nucleotide diphosphorylase compare
PFLU_RS02490 -4.8 -12.8 phosphoserine phosphatase SerB compare
PFLU_RS28390 -4.8 -8.6 methionine biosynthesis protein MetW compare
PFLU_RS28535 -4.7 -12.9 dihydroxy-acid dehydratase compare
PFLU_RS28695 -4.6 -8.9 phosphoglycerate dehydrogenase compare
PFLU_RS27370 -4.6 -12.2 anthranilate phosphoribosyltransferase compare
PFLU_RS25640 -4.6 -10.2 ketol-acid reductoisomerase compare
PFLU_RS02590 -4.5 -7.6 ATP phosphoribosyltransferase regulatory subunit compare
PFLU_RS20580 -4.5 -9.2 3-isopropylmalate dehydratase large subunit compare
PFLU_RS28385 -4.5 -13.2 homoserine O-acetyltransferase compare
PFLU_RS20565 -4.4 -11.8 3-isopropylmalate dehydrogenase compare
PFLU_RS20540 -4.4 -7.3 phosphoribosylanthranilate isomerase compare
PFLU_RS12975 -4.4 -3.0 DUF934 domain-containing protein compare
PFLU_RS29515 -4.4 -12.9 RidA family protein compare
PFLU_RS00180 -4.3 -4.2 tryptophan synthase subunit beta compare
PFLU_RS24765 -4.2 -22.4 2-isopropylmalate synthase compare
PFLU_RS04465 -4.2 -10.0 ATP phosphoribosyltransferase compare
PFLU_RS26535 -4.0 -9.6 thiamine phosphate synthase compare
PFLU_RS20510 -4.0 -13.7 O-succinylhomoserine sulfhydrylase compare
PFLU_RS01895 -4.0 -7.1 phosphoribosyl-ATP diphosphatase compare
PFLU_RS01620 -3.9 -5.9 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
PFLU_RS24025 -3.9 -12.6 quinolinate synthase NadA compare
PFLU_RS28165 -3.9 -10.0 methylenetetrahydrofolate reductase [NAD(P)H] compare
PFLU_RS01900 -3.8 -5.3 phosphoribosyl-AMP cyclohydrolase compare
PFLU_RS04470 -3.8 -9.2 histidinol dehydrogenase compare
PFLU_RS23115 -3.8 -17.8 dicarboxylate/amino acid:cation symporter compare
PFLU_RS01610 -3.6 -8.1 imidazole glycerol phosphate synthase subunit HisH compare
PFLU_RS12980 -3.6 -6.5 nitrite/sulfite reductase compare
PFLU_RS23065 -3.6 -10.8 phosphate acyltransferase PlsX compare
PFLU_RS28655 -3.6 -10.1 HAD family hydrolase compare
PFLU_RS08410 -3.5 -11.3 HTH-type transcriptional regulator CysB compare
PFLU_RS23070 -3.5 -1.9 50S ribosomal protein L32 compare
PFLU_RS25360 -3.3 -8.5 glutamate 5-kinase compare
PFLU_RS01605 -3.3 -8.5 imidazoleglycerol-phosphate dehydratase HisB compare
PFLU_RS18505 -3.3 -6.2 uroporphyrinogen-III C-methyltransferase compare
PFLU_RS02430 -3.2 -17.2 phosphomethylpyrimidine synthase ThiC compare
PFLU_RS28420 -3.2 -9.5 thiazole synthase compare
PFLU_RS07255 -3.2 -6.3 sulfurtransferase TusA family protein compare
PFLU_RS00175 -3.2 -6.7 tryptophan synthase subunit alpha compare
PFLU_RS01400 -3.1 -14.9 sigma-54-dependent Fis family transcriptional regulator compare
PFLU_RS27630 -3.1 -7.8 dethiobiotin synthase compare
PFLU_RS23310 -3.0 -8.2 arginine/ornithine succinyltransferase subunit alpha compare
PFLU_RS20515 -3.0 -2.0 amidophosphoribosyltransferase compare
PFLU_RS23305 -2.9 -11.1 arginine N-succinyltransferase compare
PFLU_RS26530 -2.8 -14.9 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase compare
PFLU_RS03665 -2.8 -6.1 molybdopterin-synthase adenylyltransferase MoeB compare
PFLU_RS25750 -2.8 -3.3 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
PFLU_RS22740 -2.8 -3.7 phosphoadenylyl-sulfate reductase compare
PFLU_RS22190 -2.7 -1.4 hypothetical protein compare
PFLU_RS01625 -2.6 -1.8 imidazole glycerol phosphate synthase subunit HisF compare
PFLU_RS19170 -2.6 -3.9 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
PFLU_RS28195 -2.5 -14.6 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
PFLU_RS01320 -2.5 -9.7 phosphoenolpyruvate carboxykinase compare
PFLU_RS07225 -2.4 -15.3 L-aspartate oxidase compare
PFLU_RS13050 -2.4 -5.3 VWA domain-containing protein compare
PFLU_RS07685 -2.4 -5.1 transcriptional repressor LexA compare
PFLU_RS06055 -2.4 -1.6 chemotaxis response regulator protein-glutamate methylesterase compare
PFLU_RS27635 -2.4 -9.6 malonyl-ACP O-methyltransferase BioC compare
PFLU_RS09055 -2.3 -1.6 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
PFLU_RS27650 -2.3 -14.5 biotin synthase BioB compare
PFLU_RS01995 -2.3 -10.8 malate dehydrogenase compare
PFLU_RS08675 -2.3 -4.6 DsbE family thiol:disulfide interchange protein compare
PFLU_RS21990 -2.2 -8.1 alpha-ribazole phosphatase family protein compare
PFLU_RS18665 -2.2 -3.2 NADH-quinone oxidoreductase subunit L compare
PFLU_RS26835 -2.2 -2.9 exodeoxyribonuclease VII small subunit compare
PFLU_RS07665 -2.2 -3.2 type I DNA topoisomerase compare
PFLU_RS25645 -2.1 -2.8 acetolactate synthase small subunit compare
PFLU_RS22600 -2.1 -1.4 RNA polymerase sigma factor SigX compare
PFLU_RS04835 -2.1 -1.7 hypothetical protein compare
PFLU_RS08650 -2.0 -2.3 heme exporter protein CcmB compare
PFLU_RS03765 -2.0 -10.1 sulfate adenylyltransferase subunit CysD compare
PFLU_RS13085 -2.0 -3.6 DUF1315 family protein compare
PFLU_RS13035 -2.0 -3.2 cobalamin biosynthesis protein CobW compare
PFLU_RS22015 -2.0 -9.6 cobalamin biosynthesis protein compare
PFLU_RS22070 -2.0 -2.7 phosphoribosylglycinamide formyltransferase compare
PFLU_RS02990 -2.0 -6.0 precorrin-3B C(17)-methyltransferase compare
PFLU_RS24085 -2.0 -3.0 Holliday junction branch migration DNA helicase RuvB compare
PFLU_RS27645 -2.0 -11.7 8-amino-7-oxononanoate synthase compare
PFLU_RS22105 -2.0 -3.2 cysteine synthase CysM compare
PFLU_RS02975 -2.0 -7.5 precorrin-3B synthase compare
PFLU_RS13540 -2.0 -1.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
PFLU_RS00415 -2.0 -1.3 thiol:disulfide interchange protein DsbA/DsbL compare
PFLU_RS22005 -1.9 -10.1 cobyric acid synthase compare
PFLU_RS13010 -1.9 -4.2 Fe-S biogenesis protein NfuA compare
PFLU_RS22725 -1.9 -3.0 transcriptional regulator compare
PFLU_RS21425 -1.9 -3.4 lipid A biosynthesis lauroyl acyltransferase compare
PFLU_RS03770 -1.9 -10.5 sulfate adenylyltransferase subunit CysN compare
PFLU_RS04475 -1.8 -9.1 histidinol-phosphate transaminase compare
PFLU_RS13000 -1.8 -11.4 methionine synthase compare
PFLU_RS21995 -1.8 -3.1 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
PFLU_RS22030 -1.8 -3.1 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
PFLU_RS22025 -1.8 -11.5 cobyrinate a,c-diamide synthase compare
PFLU_RS27640 -1.8 -1.9 alpha/beta fold hydrolase compare
PFLU_RS22735 -1.8 -8.4 bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH compare
PFLU_RS27375 -1.8 -5.1 aminodeoxychorismate/anthranilate synthase component II compare
PFLU_RS22010 -1.8 -5.8 threonine-phosphate decarboxylase compare
PFLU_RS21820 -1.7 -10.0 flagellin compare
PFLU_RS08670 -1.7 -6.0 heme lyase CcmF/NrfE family subunit compare
PFLU_RS02455 -1.7 -2.3 3',5'-cyclic-AMP phosphodiesterase compare
PFLU_RS28965 -1.7 -8.4 5-formyltetrahydrofolate cyclo-ligase compare
PFLU_RS21665 -1.7 -5.0 MinD/ParA family protein compare
PFLU_RS01910 -1.7 -1.6 sterol-binding protein compare
PFLU_RS21805 -1.7 -10.6 flagellar export chaperone FliS compare
PFLU_RS29065 -1.7 -1.1 amino acid ABC transporter ATP-binding protein compare
PFLU_RS07695 -1.7 -2.4 beta-N-acetylhexosaminidase compare
PFLU_RS18675 -1.7 -2.8 NADH-quinone oxidoreductase subunit NuoN compare
PFLU_RS23175 -1.7 -5.8 flagellar basal body rod protein FlgC compare
PFLU_RS23185 -1.6 -9.6 protein-glutamate O-methyltransferase CheR compare
PFLU_RS20660 -1.6 -9.5 aspartate/tyrosine/aromatic aminotransferase compare
PFLU_RS02565 -1.6 -2.2 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
PFLU_RS02670 -1.6 -4.1 hypothetical protein compare
PFLU_RS27380 -1.6 -7.9 anthranilate synthase component I compare
PFLU_RS13885 -1.6 -2.3 hypothetical protein compare
PFLU_RS13040 -1.6 -9.9 cobaltochelatase subunit CobN compare
PFLU_RS02985 -1.6 -8.8 precorrin-2 C(20)-methyltransferase compare
PFLU_RS31800 -1.6 -1.9 hypothetical protein compare
PFLU_RS22000 -1.6 -6.3 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
PFLU_RS13015 -1.6 -4.7 precorrin-4 C(11)-methyltransferase compare
PFLU_RS00870 -1.6 -1.7 hypothetical protein compare
PFLU_RS26565 -1.6 -1.6 rRNA maturation RNase YbeY compare
PFLU_RS06530 -1.6 -2.5 collagen-like triple helix repeat-containing protein compare
PFLU_RS13665 -1.5 -1.1 MarR family transcriptional regulator compare
PFLU_RS20290 -1.5 -1.6 integration host factor subunit alpha compare
PFLU_RS14805 -1.5 -1.8 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
PFLU_RS21830 -1.5 -11.6 flagellar hook-associated protein 3 compare
PFLU_RS02970 -1.5 -5.9 bifunctional cobalt-precorrin-7 (C(5))-methyltransferase/cobalt-precorrin-6B (C(15))-methyltransferase compare
PFLU_RS29095 -1.5 -12.8 polyphosphate kinase 1 compare
PFLU_RS24695 -1.5 -1.8 PTS glucose transporter subunit IIB compare
PFLU_RS01315 -1.5 -2.9 Hsp33 family molecular chaperone HslO compare
PFLU_RS29900 -1.5 -8.3 DNA helicase II compare
PFLU_RS02965 -1.5 -7.8 cobalt-precorrin-6A reductase compare
PFLU_RS21645 -1.5 -6.5 chemotaxis protein CheA compare
PFLU_RS04220 -1.5 -6.5 FadR family transcriptional regulator compare
PFLU_RS15005 -1.5 -1.9 hypothetical protein compare
PFLU_RS21615 -1.5 -6.2 chemotaxis protein CheW compare
PFLU_RS18530 -1.5 -4.1 DNA translocase FtsK compare
PFLU_RS29550 -1.5 -6.8 ATP-dependent DNA helicase RecG compare
PFLU_RS19165 -1.5 -3.0 ATP-dependent Clp protease ATP-binding subunit ClpX compare
PFLU_RS23205 -1.5 -6.9 flagellar protein FlgN compare
PFLU_RS14550 -1.4 -5.1 UTP--glucose-1-phosphate uridylyltransferase GalU compare
PFLU_RS24125 -1.4 -1.9 cold-shock protein compare
PFLU_RS15410 -1.4 -2.3 zinc-dependent alcohol dehydrogenase family protein compare
PFLU_RS01405 -1.4 -7.2 sensor histidine kinase compare
PFLU_RS01070 -1.4 -3.3 alpha/beta hydrolase compare
PFLU_RS21760 -1.4 -8.1 flagellar protein export ATPase FliI compare
PFLU_RS21770 -1.4 -7.2 flagellar motor switch protein FliG compare
PFLU_RS22095 -1.4 -10.1 GTP diphosphokinase compare
PFLU_RS08655 -1.4 -3.5 heme ABC transporter permease compare
PFLU_RS02275 -1.4 -1.3 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
PFLU_RS31185 -1.4 -3.9 hypothetical protein compare
PFLU_RS28310 -1.4 -1.4 response regulator compare
PFLU_RS26735 -1.4 -5.1 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
PFLU_RS21810 -1.3 -10.3 flagellar filament capping protein FliD compare
PFLU_RS05965 -1.3 -0.8 hypothetical protein compare
PFLU_RS21835 -1.3 -9.0 flagellar hook-associated protein FlgK compare
PFLU_RS18625 -1.3 -4.3 NADH-quinone oxidoreductase subunit C/D compare
PFLU_RS00210 -1.3 -1.5 OsmC family protein compare
PFLU_RS23675 -1.3 -2.3 hypothetical protein compare
PFLU_RS04140 -1.3 -2.0 response regulator transcription factor compare
PFLU_RS21625 -1.3 -7.2 ParA family protein compare
PFLU_RS25735 -1.3 -1.8 sigma-54-dependent Fis family transcriptional regulator compare
PFLU_RS13045 -1.3 -4.3 AAA domain-containing protein compare
PFLU_RS09885 -1.3 -5.4 threonine synthase compare
PFLU_RS30730 -1.3 -2.5 helix-turn-helix domain-containing protein compare
PFLU_RS21850 -1.3 -8.2 flagellar basal body L-ring protein FlgH compare
PFLU_RS21725 -1.3 -5.5 flagellar motor switch protein FliM compare
PFLU_RS15610 -1.3 -4.0 helix-turn-helix transcriptional regulator compare
PFLU_RS10430 -1.3 -3.2 peptidase compare
PFLU_RS02130 -1.3 -1.9 glycosyl transferase compare
PFLU_RS18670 -1.3 -1.6 NADH-quinone oxidoreductase subunit M compare
PFLU_RS23920 -1.3 -1.4 septation protein A compare
PFLU_RS23180 -1.3 -5.4 flagellar basal body rod protein FlgB compare
PFLU_RS05885 -1.3 -2.4 recombinase RecA compare
PFLU_RS03610 -1.3 -3.6 redox-regulated ATPase YchF compare
PFLU_RS11980 -1.3 -4.6 precorrin-6A synthase (deacetylating) compare
PFLU_RS18910 -1.3 -2.9 MarR family transcriptional regulator compare
PFLU_RS05585 -1.3 -4.5 MtnX-like HAD-IB family phosphatase compare
PFLU_RS30165 -1.3 -6.3 ParA family protein compare
PFLU_RS21735 -1.3 -7.2 flagellar hook-length control protein FliK compare
PFLU_RS08160 -1.3 -5.5 sugar transferase compare
PFLU_RS01965 -1.3 -1.2 ATP-dependent protease subunit HslV compare
PFLU_RS25755 -1.3 -0.9 pantoate--beta-alanine ligase compare
PFLU_RS25800 -1.3 -5.4 tRNA pseudouridine(55) synthase TruB compare
PFLU_RS18640 -1.2 -2.4 NADH-quinone oxidoreductase subunit NuoG compare
PFLU_RS04165 -1.2 -3.5 cell division protein ZapE compare
PFLU_RS25715 -1.2 -6.2 RNA polymerase-binding protein DksA compare
PFLU_RS03870 -1.2 -5.5 23S rRNA pseudouridine(1911/1915/1917) synthase RluD compare
PFLU_RS05720 -1.2 -7.3 OmpA family protein compare
PFLU_RS23195 -1.2 -8.2 flagellar basal body P-ring formation protein FlgA compare
PFLU_RS21315 -1.2 -4.1 GTP cyclohydrolase I FolE compare
PFLU_RS13020 -1.2 -2.6 cobalamin biosynthesis protein compare
PFLU_RS21860 -1.2 -4.7 flagellar basal body rod protein FlgF compare
PFLU_RS26640 -1.2 -6.1 septal ring lytic transglycosylase RlpA family protein compare
PFLU_RS15795 -1.2 -1.4 hypothetical protein compare
PFLU_RS26635 -1.2 -4.3 D-alanyl-D-alanine carboxypeptidase compare
PFLU_RS27440 -1.2 -4.5 nucleotidyltransferase family protein compare
PFLU_RS23220 -1.2 -2.8 tRNA-Arg compare
PFLU_RS12715 -1.2 -1.3 fumarylacetoacetate hydrolase family protein compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source D,L-Malic Acid in Pseudomonas fluorescens SBW25-INTG

For carbon source D,L-Malic Acid across organisms