Experiment set27S387 for Pseudomonas fluorescens SBW25-INTG

Compare to:

Sodium L-Lactate carbon source

200 most important genes:

  gene name fitness t score description  
PFLU_RS27365 -5.2 -8.0 indole-3-glycerol phosphate synthase TrpC compare
PFLU_RS20575 -5.0 -3.4 3-isopropylmalate dehydratase small subunit compare
PFLU_RS28385 -4.7 -13.4 homoserine O-acetyltransferase compare
PFLU_RS01895 -4.5 -6.2 phosphoribosyl-ATP diphosphatase compare
PFLU_RS28535 -4.5 -15.5 dihydroxy-acid dehydratase compare
PFLU_RS20580 -4.4 -10.3 3-isopropylmalate dehydratase large subunit compare
PFLU_RS27370 -4.4 -13.5 anthranilate phosphoribosyltransferase compare
PFLU_RS29875 -4.4 -21.0 oxaloacetate decarboxylase subunit alpha compare
PFLU_RS02490 -4.3 -14.6 phosphoserine phosphatase SerB compare
PFLU_RS29880 -4.3 -18.3 acetyl-CoA carboxylase biotin carboxylase subunit compare
PFLU_RS25640 -4.3 -12.9 ketol-acid reductoisomerase compare
PFLU_RS20510 -4.2 -12.4 O-succinylhomoserine sulfhydrylase compare
PFLU_RS04465 -4.2 -10.5 ATP phosphoribosyltransferase compare
PFLU_RS01605 -4.2 -6.4 imidazoleglycerol-phosphate dehydratase HisB compare
PFLU_RS24765 -4.2 -23.3 2-isopropylmalate synthase compare
PFLU_RS20540 -4.2 -8.9 phosphoribosylanthranilate isomerase compare
PFLU_RS21125 -4.1 -17.3 FMN-dependent L-lactate dehydrogenase LldD conserved
PFLU_RS28390 -4.1 -11.9 methionine biosynthesis protein MetW compare
PFLU_RS28695 -4.1 -9.9 phosphoglycerate dehydrogenase compare
PFLU_RS20565 -4.1 -14.0 3-isopropylmalate dehydrogenase compare
PFLU_RS02590 -4.0 -9.6 ATP phosphoribosyltransferase regulatory subunit compare
PFLU_RS29515 -4.0 -13.9 RidA family protein compare
PFLU_RS12975 -3.9 -4.6 DUF934 domain-containing protein compare
PFLU_RS28165 -3.8 -11.8 methylenetetrahydrofolate reductase [NAD(P)H] compare
PFLU_RS27640 -3.8 -3.3 alpha/beta fold hydrolase compare
PFLU_RS28420 -3.8 -12.0 thiazole synthase compare
PFLU_RS27630 -3.7 -8.3 dethiobiotin synthase compare
PFLU_RS25360 -3.7 -9.0 glutamate 5-kinase compare
PFLU_RS01900 -3.7 -7.1 phosphoribosyl-AMP cyclohydrolase compare
PFLU_RS24025 -3.7 -13.9 quinolinate synthase NadA compare
PFLU_RS00180 -3.6 -7.0 tryptophan synthase subunit beta compare
PFLU_RS29885 -3.6 -14.8 LysR family transcriptional regulator compare
PFLU_RS04470 -3.6 -11.6 histidinol dehydrogenase compare
PFLU_RS28655 -3.5 -11.9 HAD family hydrolase compare
PFLU_RS01610 -3.5 -9.7 imidazole glycerol phosphate synthase subunit HisH compare
PFLU_RS00175 -3.5 -6.8 tryptophan synthase subunit alpha compare
PFLU_RS23070 -3.5 -2.0 50S ribosomal protein L32 compare
PFLU_RS27650 -3.5 -18.1 biotin synthase BioB compare
PFLU_RS01620 -3.5 -8.1 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
PFLU_RS04565 -3.4 -1.9 TMEM165/GDT1 family protein compare
PFLU_RS12980 -3.3 -7.9 nitrite/sulfite reductase compare
PFLU_RS03970 -3.2 -12.6 carboxylating nicotinate-nucleotide diphosphorylase compare
PFLU_RS08165 -3.2 -3.2 acyl carrier protein compare
PFLU_RS25645 -3.1 -2.1 acetolactate synthase small subunit compare
PFLU_RS07255 -3.1 -5.8 sulfurtransferase TusA family protein compare
PFLU_RS26530 -3.1 -16.3 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase compare
PFLU_RS08660 -3.0 -4.1 heme exporter protein CcmD compare
PFLU_RS18505 -3.0 -8.0 uroporphyrinogen-III C-methyltransferase compare
PFLU_RS26535 -2.9 -9.8 thiamine phosphate synthase compare
PFLU_RS28195 -2.9 -17.3 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
PFLU_RS23310 -2.8 -8.7 arginine/ornithine succinyltransferase subunit alpha compare
PFLU_RS01625 -2.8 -1.9 imidazole glycerol phosphate synthase subunit HisF compare
PFLU_RS27635 -2.8 -11.5 malonyl-ACP O-methyltransferase BioC compare
PFLU_RS21120 -2.8 -7.5 LysR family transcriptional regulator conserved
PFLU_RS27645 -2.8 -14.4 8-amino-7-oxononanoate synthase compare
PFLU_RS20515 -2.7 -4.1 amidophosphoribosyltransferase compare
PFLU_RS03665 -2.7 -6.4 molybdopterin-synthase adenylyltransferase MoeB compare
PFLU_RS08410 -2.7 -9.8 HTH-type transcriptional regulator CysB compare
PFLU_RS26565 -2.7 -2.6 rRNA maturation RNase YbeY compare
PFLU_RS06055 -2.7 -3.9 chemotaxis response regulator protein-glutamate methylesterase compare
PFLU_RS22740 -2.7 -3.1 phosphoadenylyl-sulfate reductase compare
PFLU_RS02430 -2.6 -14.8 phosphomethylpyrimidine synthase ThiC compare
PFLU_RS08675 -2.6 -5.4 DsbE family thiol:disulfide interchange protein compare
PFLU_RS23185 -2.6 -14.4 protein-glutamate O-methyltransferase CheR compare
PFLU_RS21615 -2.3 -9.8 chemotaxis protein CheW compare
PFLU_RS09055 -2.3 -1.6 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
PFLU_RS07225 -2.3 -14.3 L-aspartate oxidase compare
PFLU_RS29095 -2.3 -18.6 polyphosphate kinase 1 compare
PFLU_RS24090 -2.2 -3.3 Holliday junction branch migration protein RuvA compare
PFLU_RS22630 -2.2 -15.5 phosphoenolpyruvate synthase compare
PFLU_RS20290 -2.2 -1.8 integration host factor subunit alpha compare
PFLU_RS24205 -2.1 -1.4 DNA binding protein compare
PFLU_RS00415 -2.1 -1.4 thiol:disulfide interchange protein DsbA/DsbL compare
PFLU_RS23305 -2.1 -10.2 arginine N-succinyltransferase compare
PFLU_RS26635 -2.1 -3.2 D-alanyl-D-alanine carboxypeptidase compare
PFLU_RS24095 -2.0 -1.4 crossover junction endodeoxyribonuclease RuvC compare
PFLU_RS17060 -2.0 -2.3 monooxygenase compare
PFLU_RS05655 -2.0 -4.4 DeoR/GlpR family transcriptional regulator compare
PFLU_RS07695 -2.0 -4.2 beta-N-acetylhexosaminidase compare
PFLU_RS08665 -2.0 -5.3 cytochrome c maturation protein CcmE compare
PFLU_RS22105 -2.0 -3.4 cysteine synthase CysM compare
PFLU_RS21805 -2.0 -11.4 flagellar export chaperone FliS compare
PFLU_RS01315 -1.9 -3.1 Hsp33 family molecular chaperone HslO compare
PFLU_RS21655 -1.9 -5.1 response regulator compare
PFLU_RS03770 -1.9 -10.3 sulfate adenylyltransferase subunit CysN compare
PFLU_RS00310 -1.9 -1.5 twin transmembrane helix small protein compare
PFLU_RS24085 -1.9 -3.0 Holliday junction branch migration DNA helicase RuvB compare
PFLU_RS23065 -1.9 -9.5 phosphate acyltransferase PlsX compare
PFLU_RS18595 -1.9 -3.0 cupin domain-containing protein compare
PFLU_RS01320 -1.9 -9.3 phosphoenolpyruvate carboxykinase compare
PFLU_RS13010 -1.9 -4.1 Fe-S biogenesis protein NfuA compare
PFLU_RS22735 -1.8 -9.4 bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH compare
PFLU_RS22070 -1.8 -2.9 phosphoribosylglycinamide formyltransferase compare
PFLU_RS13540 -1.8 -1.7 3-phosphoshikimate 1-carboxyvinyltransferase compare
PFLU_RS15410 -1.8 -2.0 zinc-dependent alcohol dehydrogenase family protein compare
PFLU_RS03075 -1.8 -2.0 translation initiation factor Sui1 compare
PFLU_RS28965 -1.8 -8.6 5-formyltetrahydrofolate cyclo-ligase compare
PFLU_RS01965 -1.8 -1.2 ATP-dependent protease subunit HslV compare
PFLU_RS02775 -1.7 -1.9 urease accessory protein UreF compare
PFLU_RS03870 -1.7 -6.6 23S rRNA pseudouridine(1911/1915/1917) synthase RluD compare
PFLU_RS08655 -1.7 -4.1 heme ABC transporter permease compare
PFLU_RS21820 -1.7 -9.5 flagellin compare
PFLU_RS08670 -1.7 -6.7 heme lyase CcmF/NrfE family subunit compare
PFLU_RS18665 -1.7 -2.7 NADH-quinone oxidoreductase subunit L compare
PFLU_RS18675 -1.7 -3.2 NADH-quinone oxidoreductase subunit NuoN compare
PFLU_RS14450 -1.6 -2.2 AzlD domain-containing protein compare
PFLU_RS18585 -1.6 -1.9 high frequency lysogenization protein HflD compare
PFLU_RS07910 -1.6 -1.9 type 1 fimbrial protein compare
PFLU_RS21765 -1.6 -6.2 flagellar assembly protein FliH compare
PFLU_RS31530 -1.6 -1.2 transposase compare
PFLU_RS02565 -1.6 -3.1 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
PFLU_RS21830 -1.6 -12.5 flagellar hook-associated protein 3 compare
PFLU_RS25715 -1.6 -8.6 RNA polymerase-binding protein DksA compare
PFLU_RS05020 -1.6 -1.2 DUF1120 domain-containing protein compare
PFLU_RS14550 -1.6 -5.8 UTP--glucose-1-phosphate uridylyltransferase GalU compare
PFLU_RS27475 -1.6 -5.4 symmetrical bis(5'-nucleosyl)-tetraphosphatase compare
PFLU_RS18655 -1.6 -1.8 NADH-quinone oxidoreductase subunit J compare
PFLU_RS12635 -1.6 -1.7 conjugal transfer protein TraR compare
PFLU_RS03765 -1.6 -8.1 sulfate adenylyltransferase subunit CysD compare
PFLU_RS27380 -1.6 -8.0 anthranilate synthase component I compare
PFLU_RS18395 -1.5 -1.0 MotA/TolQ/ExbB proton channel family protein compare
PFLU_RS19175 -1.5 -6.3 trigger factor compare
PFLU_RS22075 -1.5 -9.0 DUF3108 domain-containing protein compare
PFLU_RS02275 -1.5 -1.5 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
PFLU_RS19170 -1.5 -3.9 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
PFLU_RS08650 -1.5 -2.5 heme exporter protein CcmB compare
PFLU_RS23205 -1.5 -7.7 flagellar protein FlgN compare
PFLU_RS25790 -1.5 -4.7 polyribonucleotide nucleotidyltransferase compare
PFLU_RS04150 -1.5 -5.9 DUF1043 family protein compare
PFLU_RS22395 -1.5 -4.4 fumarate/nitrate reduction transcriptional regulator Fnr compare
PFLU_RS25750 -1.4 -4.1 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
PFLU_RS18530 -1.4 -4.0 DNA translocase FtsK compare
PFLU_RS21810 -1.4 -10.9 flagellar filament capping protein FliD compare
PFLU_RS21860 -1.4 -5.3 flagellar basal body rod protein FlgF compare
PFLU_RS21625 -1.4 -8.2 ParA family protein compare
PFLU_RS21795 -1.4 -10.7 sigma-54-dependent Fis family transcriptional regulator compare
PFLU_RS19935 -1.4 -1.8 type II secretion system protein GspF compare
PFLU_RS28650 -1.4 -4.7 RNA pyrophosphohydrolase compare
PFLU_RS21850 -1.4 -8.7 flagellar basal body L-ring protein FlgH compare
PFLU_RS02980 -1.4 -1.5 precorrin-8X methylmutase compare
PFLU_RS21575 -1.4 -2.7 pyrimidine/purine nucleoside phosphorylase compare
PFLU_RS25735 -1.4 -1.9 sigma-54-dependent Fis family transcriptional regulator compare
PFLU_RS22835 -1.4 -6.4 amidotransferase compare
PFLU_RS29290 -1.4 -3.0 hypothetical protein compare
PFLU_RS08160 -1.4 -6.1 sugar transferase compare
PFLU_RS11980 -1.3 -4.8 precorrin-6A synthase (deacetylating) compare
PFLU_RS08490 -1.3 -1.9 DEAD/DEAH box helicase compare
PFLU_RS05630 -1.3 -1.9 amino acid ABC transporter ATP-binding protein compare
PFLU_RS21735 -1.3 -7.7 flagellar hook-length control protein FliK compare
PFLU_RS02455 -1.3 -1.8 3',5'-cyclic-AMP phosphodiesterase compare
PFLU_RS21645 -1.3 -7.1 chemotaxis protein CheA compare
PFLU_RS27440 -1.3 -5.1 nucleotidyltransferase family protein compare
PFLU_RS26640 -1.3 -6.6 septal ring lytic transglycosylase RlpA family protein compare
PFLU_RS02975 -1.3 -6.2 precorrin-3B synthase compare
PFLU_RS07275 -1.3 -1.9 4-hydroxy-tetrahydrodipicolinate synthase compare
PFLU_RS21835 -1.3 -8.6 flagellar hook-associated protein FlgK compare
PFLU_RS21660 -1.3 -8.4 RNA polymerase sigma factor FliA compare
PFLU_RS23165 -1.3 -10.5 flagellar hook protein FlgE compare
PFLU_RS21780 -1.3 -3.8 flagellar hook-basal body complex protein FliE compare
PFLU_RS27375 -1.3 -4.0 aminodeoxychorismate/anthranilate synthase component II compare
PFLU_RS07685 -1.3 -3.5 transcriptional repressor LexA compare
PFLU_RS21990 -1.3 -4.8 alpha-ribazole phosphatase family protein compare
PFLU_RS21640 -1.3 -4.6 chemotaxis response regulator protein-glutamate methylesterase compare
PFLU_RS21760 -1.3 -7.8 flagellar protein export ATPase FliI compare
PFLU_RS04220 -1.3 -5.6 FadR family transcriptional regulator compare
PFLU_RS05965 -1.3 -1.8 hypothetical protein compare
PFLU_RS29900 -1.3 -7.5 DNA helicase II compare
PFLU_RS22095 -1.3 -9.6 GTP diphosphokinase compare
PFLU_RS09535 -1.3 -1.4 TIGR03750 family conjugal transfer protein compare
PFLU_RS18670 -1.2 -1.7 NADH-quinone oxidoreductase subunit M compare
PFLU_RS25800 -1.2 -5.5 tRNA pseudouridine(55) synthase TruB compare
PFLU_RS15610 -1.2 -3.8 helix-turn-helix transcriptional regulator compare
PFLU_RS21845 -1.2 -5.4 flagellar basal body P-ring protein FlgI compare
PFLU_RS21985 -1.2 -3.4 adenosylcobinamide-GDP ribazoletransferase compare
PFLU_RS18625 -1.2 -4.0 NADH-quinone oxidoreductase subunit C/D compare
PFLU_RS25755 -1.2 -1.1 pantoate--beta-alanine ligase compare
PFLU_RS21675 -1.2 -8.4 flagellar biosynthesis protein FlhA compare
PFLU_RS02970 -1.2 -4.8 bifunctional cobalt-precorrin-7 (C(5))-methyltransferase/cobalt-precorrin-6B (C(15))-methyltransferase compare
PFLU_RS25945 -1.2 -7.5 L-lactate permease conserved
PFLU_RS02670 -1.2 -3.8 hypothetical protein compare
PFLU_RS30165 -1.2 -6.1 ParA family protein compare
PFLU_RS26905 -1.2 -6.4 transcriptional regulator NrdR compare
PFLU_RS19640 -1.2 -3.1 5-oxoprolinase subunit PxpA compare
PFLU_RS07665 -1.2 -2.2 type I DNA topoisomerase compare
PFLU_RS15745 -1.2 -2.7 type II secretion system ATPase GspE compare
PFLU_RS21700 -1.2 -4.3 flagellar type III secretion system protein FliR compare
PFLU_RS19165 -1.2 -2.9 ATP-dependent Clp protease ATP-binding subunit ClpX compare
PFLU_RS02990 -1.2 -4.5 precorrin-3B C(17)-methyltransferase compare
PFLU_RS19955 -1.2 -2.5 TetR/AcrR family transcriptional regulator compare
PFLU_RS22005 -1.2 -6.5 cobyric acid synthase compare
PFLU_RS20660 -1.1 -6.6 aspartate/tyrosine/aromatic aminotransferase compare
PFLU_RS23180 -1.1 -5.0 flagellar basal body rod protein FlgB compare
PFLU_RS21710 -1.1 -4.9 flagellar type III secretion system pore protein FliP compare
PFLU_RS05250 -1.1 -2.2 elongation factor 4 compare
PFLU_RS04070 -1.1 -0.8 peptide chain release factor 3 compare
PFLU_RS07245 -1.1 -5.0 DegQ family serine endoprotease compare
PFLU_RS23195 -1.1 -7.5 flagellar basal body P-ring formation protein FlgA compare
PFLU_RS01485 -1.1 -8.1 cellulase compare
PFLU_RS08125 -1.1 -2.2 integration host factor subunit beta compare
PFLU_RS08065 -1.1 -4.8 N-acetylmuramic acid 6-phosphate phosphatase MupP compare


Specific Phenotypes

For 4 genes in this experiment

For carbon source Sodium L-Lactate in Pseudomonas fluorescens SBW25-INTG

For carbon source Sodium L-Lactate across organisms