Experiment set26IT043 for Klebsiella michiganensis M5al

Compare to:

Dictyostellum sp.mixed culture-1

200 most important genes:

  gene name fitness t score description  
BWI76_RS13920 -5.7 -8.4 magnesium-translocating P-type ATPase compare
BWI76_RS04465 -5.6 -3.0 carbamoyl-phosphate synthase small subunit compare
BWI76_RS26455 -5.6 -1.8 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS05120 -5.1 -10.1 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS04470 -5.0 -6.9 carbamoyl phosphate synthase large subunit compare
BWI76_RS13915 -5.0 -3.4 magnesium transport protein MgtC compare
BWI76_RS26425 -4.9 -9.2 zinc/cadmium/mercury/lead-transporting ATPase compare
BWI76_RS19840 -4.8 -1.1 hypothetical protein compare
BWI76_RS25700 -4.6 -6.0 heavy metal-responsive transcriptional regulator compare
BWI76_RS02995 -4.3 -6.0 aspartate carbamoyltransferase compare
BWI76_RS04510 -4.3 -1.7 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS15110 -4.1 -9.9 putative excinuclease ABC subunit A compare
BWI76_RS26460 -4.1 -4.2 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS06525 -4.0 -4.9 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS01325 -3.9 -2.1 twin-arginine translocase subunit TatB compare
BWI76_RS10990 -3.9 -1.5 dihydroorotase compare
BWI76_RS09640 -3.6 -2.0 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS25065 -3.5 -2.4 polyribonucleotide nucleotidyltransferase compare
BWI76_RS09645 -3.5 -0.8 thioredoxin-disulfide reductase compare
BWI76_RS15225 -3.5 -2.4 DeoR family transcriptional regulator compare
BWI76_RS26665 -3.4 -2.7 DNA-binding response regulator compare
BWI76_RS01350 -3.2 -1.0 NAD(P)H-flavin reductase compare
BWI76_RS26670 -3.2 -10.5 two-component sensor histidine kinase compare
BWI76_RS23480 -2.9 -8.8 EAL domain-containing protein compare
BWI76_RS26075 -2.9 -2.6 DNA adenine methylase compare
BWI76_RS06530 -2.8 -4.4 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS05015 -2.8 -2.3 transcriptional regulator compare
BWI76_RS27430 -2.8 -0.9 (p)ppGpp synthetase compare
BWI76_RS21370 -2.7 -0.8 ATP-dependent RNA helicase SrmB compare
BWI76_RS08520 -2.7 -1.6 colicin transporter TolQ compare
BWI76_RS20380 -2.6 -0.8 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS01870 -2.6 -4.8 diacylglycerol kinase compare
BWI76_RS11155 -2.5 -1.7 penicillin-binding protein activator LpoB compare
BWI76_RS25285 -2.5 -1.1 HPr family phosphocarrier protein compare
BWI76_RS04305 -2.4 -0.8 molecular chaperone DnaJ compare
BWI76_RS26390 -2.4 -3.2 cell division protein FtsX compare
BWI76_RS11430 -2.3 -0.9 lipoprotein compare
BWI76_RS08525 -2.3 -2.1 colicin transporter compare
BWI76_RS03105 -2.3 -1.0 myo-inosose-2 dehydratase compare
BWI76_RS11275 -2.3 -7.6 sensor protein PhoQ compare
BWI76_RS23265 -2.3 -1.9 hypothetical protein compare
BWI76_RS26395 -2.2 -2.4 cell division protein FtsE compare
BWI76_RS12145 -2.2 -1.7 hypothetical protein compare
BWI76_RS24080 -2.2 -1.6 DUF179 domain-containing protein compare
BWI76_RS07465 -2.2 -1.5 TetR family transcriptional regulator compare
BWI76_RS09635 -2.2 -1.0 amino acid ABC transporter ATP-binding protein compare
BWI76_RS00345 -2.2 -2.0 protein disulfide oxidoreductase DsbA compare
BWI76_RS26085 -2.2 -1.1 3-dehydroquinate synthase compare
BWI76_RS19035 -2.1 -4.5 dTDP-rhamnosyl transferase compare
BWI76_RS01210 -2.1 -0.8 tyrosine recombinase XerC compare
BWI76_RS08535 -2.1 -1.1 translocation protein TolB compare
BWI76_RS08495 -2.1 -4.2 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS27385 -2.1 -4.6 orotate phosphoribosyltransferase compare
BWI76_RS11980 -2.1 -1.1 DeoR family transcriptional regulator compare
BWI76_RS21395 -2.1 -1.8 DTW domain-containing protein compare
BWI76_RS08385 -2.0 -2.0 citrate (Si)-synthase compare
BWI76_RS26095 -2.0 -1.0 shikimate kinase compare
BWI76_RS19845 -1.9 -5.6 phosphatase compare
BWI76_RS13730 -1.9 -1.7 hypothetical protein compare
BWI76_RS09910 -1.9 -7.9 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS26570 -1.9 -2.4 anion permease compare
BWI76_RS01330 -1.9 -2.6 twin-arginine translocase subunit TatC compare
BWI76_RS08500 -1.9 -2.4 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS19770 -1.9 -1.6 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS24400 -1.9 -6.1 outer membrane channel protein TolC compare
BWI76_RS21140 -1.9 -1.7 molecular chaperone HscA compare
BWI76_RS17675 -1.9 -1.5 hypothetical protein compare
BWI76_RS16935 -1.8 -0.9 shikimate dehydrogenase compare
BWI76_RS08430 -1.8 -5.7 succinate--CoA ligase subunit alpha compare
BWI76_RS19040 -1.8 -4.3 hypothetical protein compare
BWI76_RS20650 -1.8 -0.9 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS05450 -1.7 -0.8 ribonuclease HI compare
BWI76_RS11515 -1.7 -1.0 peptide-methionine (R)-S-oxide reductase compare
BWI76_RS01380 -1.7 -2.8 YigZ family protein compare
BWI76_RS04715 -1.6 -0.7 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS02765 -1.6 -4.8 membrane protein compare
BWI76_RS00180 -1.6 -0.7 F0F1 ATP synthase subunit epsilon compare
BWI76_RS26470 -1.6 -3.3 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
BWI76_RS00400 -1.6 -0.6 glutamine synthetase compare
BWI76_RS00355 -1.6 -1.6 DNA polymerase I compare
BWI76_RS06765 -1.6 -2.0 transcriptional regulator compare
BWI76_RS18070 -1.6 -2.4 DNA polymerase III subunit epsilon compare
BWI76_RS19055 -1.6 -6.9 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS08205 -1.5 -3.9 DNA-binding transcriptional dual regulator NagC compare
BWI76_RS20435 -1.5 -0.8 chorismate synthase compare
BWI76_RS16275 -1.5 -1.5 fumarate hydratase FumA compare
BWI76_RS25705 -1.5 -2.9 hypothetical protein compare
BWI76_RS10770 -1.5 -1.6 pyrimidine utilization protein C compare
BWI76_RS01125 -1.5 -3.7 4-alpha-L-fucosyltransferase compare
BWI76_RS17190 -1.5 -1.6 TonB system transport protein TonB compare
BWI76_RS14490 -1.5 -2.4 ABC transporter substrate-binding protein compare
BWI76_RS02410 -1.5 -0.8 EF-P beta-lysylation protein EpmB compare
BWI76_RS06770 -1.5 -6.2 Hha toxicity attenuator compare
BWI76_RS11965 -1.4 -2.1 orotidine-5'-phosphate decarboxylase compare
BWI76_RS13215 -1.4 -0.9 type I glyceraldehyde-3-phosphate dehydrogenase compare
BWI76_RS00140 -1.4 -0.8 phosphate transport system regulator PhoU compare
BWI76_RS19905 -1.4 -3.1 OmpK36 porin compare
BWI76_RS12280 -1.4 -2.9 hypothetical protein compare
BWI76_RS00720 -1.4 -1.3 DNA-binding response regulator compare
BWI76_RS23330 -1.4 -4.3 transcriptional regulator GalR compare
BWI76_RS24025 -1.4 -3.7 agmatinase compare
BWI76_RS19010 -1.4 -1.5 polysaccharide pyruvyl transferase yvff compare
BWI76_RS22640 -1.4 -1.2 hypothetical protein compare
BWI76_RS08395 -1.4 -1.2 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS16315 -1.4 -0.9 SirA-like protein compare
BWI76_RS09190 -1.4 -2.1 hypothetical protein compare
BWI76_RS01800 -1.4 -2.9 glucose-6-phosphate isomerase compare
BWI76_RS13595 -1.3 -2.4 transcriptional regulator compare
BWI76_RS18140 -1.3 -1.3 zinc ABC transporter permease compare
BWI76_RS16965 -1.3 -1.1 murein lipoprotein compare
BWI76_RS17820 -1.3 -1.7 hypothetical protein compare
BWI76_RS09730 -1.3 -0.9 pyruvate formate lyase 1-activating protein compare
BWI76_RS01110 -1.3 -2.7 TDP-fucosamine acetyltransferase compare
BWI76_RS15115 -1.3 -1.7 MFS transporter compare
BWI76_RS18715 -1.3 -3.4 hypothetical protein compare
BWI76_RS17155 -1.3 -1.1 hypothetical protein compare
BWI76_RS01540 -1.3 -1.4 thiamine biosynthesis protein ThiS compare
BWI76_RS04705 -1.3 -3.0 DNA-binding transcriptional regulator FruR compare
BWI76_RS05465 -1.3 -0.8 amidohydrolase compare
BWI76_RS03660 -1.2 -2.7 hypothetical protein compare
BWI76_RS11190 -1.2 -1.4 putative TetR/AcrR family transcriptional regulatory protein compare
BWI76_RS27475 -1.2 -5.9 regulatory protein GntR family protein compare
BWI76_RS17980 -1.2 -2.0 RNA chaperone ProQ compare
BWI76_RS08705 -1.2 -2.2 putative LuxR family regulatory protein compare
BWI76_RS24900 -1.2 -1.1 DeoR family transcriptional regulator compare
BWI76_RS16485 -1.2 -0.7 ribonuclease T compare
BWI76_RS09310 -1.2 -2.3 hypothetical protein compare
BWI76_RS26200 -1.2 -3.2 starch synthase compare
BWI76_RS20565 -1.2 -1.6 hypothetical protein compare
BWI76_RS14670 -1.2 -1.0 hypothetical protein compare
BWI76_RS02990 -1.2 -2.4 aspartate carbamoyltransferase regulatory subunit compare
BWI76_RS05655 -1.2 -2.0 hypothetical protein compare
BWI76_RS19050 -1.2 -5.6 NAD(P)-dependent oxidoreductase compare
BWI76_RS27235 -1.2 -4.0 murein hydrolase activator EnvC compare
BWI76_RS00025 -1.2 -0.6 hypothetical protein compare
BWI76_RS06635 -1.2 -1.3 methylated-DNA--protein-cysteine methyltransferase compare
BWI76_RS08425 -1.1 -2.6 succinyl-CoA ligase subunit beta compare
BWI76_RS04060 -1.1 -1.3 hypothetical protein compare
BWI76_RS25425 -1.1 -0.8 arginine repressor compare
BWI76_RS27390 -1.1 -3.2 ribonuclease PH compare
BWI76_RS21285 -1.1 -1.0 HAD family hydrolase compare
BWI76_RS05810 -1.1 -0.7 hypothetical protein compare
BWI76_RS09970 -1.1 -0.8 porin OmpA compare
BWI76_RS15850 -1.1 -0.8 DUF1317 domain-containing protein compare
BWI76_RS25960 -1.1 -2.7 NUDIX hydrolase compare
BWI76_RS16490 -1.1 -1.1 glutaredoxin compare
BWI76_RS02580 -1.1 -0.8 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS18580 -1.1 -0.9 hypothetical protein compare
BWI76_RS00750 -1.1 -2.1 ATP-dependent protease ATP-binding subunit HslU compare
BWI76_RS08210 -1.1 -0.9 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS15435 -1.1 -0.8 hypothetical protein compare
BWI76_RS09760 -1.1 -2.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS24635 -1.1 -3.0 autoinducer-2 (AI-2) modifying protein LsrG compare
BWI76_RS06800 -1.1 -0.7 DUF2496 domain-containing protein compare
BWI76_RS02530 -1.1 -0.5 tRNA dimethylallyltransferase compare
BWI76_RS17720 -1.1 -0.3 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS27170 -1.1 -3.5 MltR family transcriptional regulator compare
BWI76_RS19480 -1.1 -1.6 transcriptional regulator compare
BWI76_RS10700 -1.1 -1.5 XRE family transcriptional regulator compare
BWI76_RS16755 -1.1 -1.6 acetoin reductase compare
BWI76_RS08530 -1.1 -1.0 protein TolA compare
BWI76_RS25545 -1.1 -2.1 hypothetical protein compare
BWI76_RS01220 -1.1 -3.0 DNA-dependent helicase II compare
BWI76_RS21800 -1.1 -4.3 MASE2 domain/diguanylate cyclase compare
BWI76_RS13160 -1.1 -1.1 azoreductase compare
BWI76_RS04565 -1.1 -2.0 bifunctional tRNA pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase RluA compare
BWI76_RS15840 -1.1 -1.9 prophage protein compare
BWI76_RS12045 -1.1 -1.2 hypothetical protein compare
BWI76_RS08545 -1.1 -1.5 cell division protein CpoB compare
BWI76_RS10330 -1.1 -1.8 TetR family transcriptional regulator compare
BWI76_RS00600 -1.0 -3.1 LacI family transcriptional regulator compare
BWI76_RS21920 -1.0 -1.9 amino acid ABC transporter substrate-binding protein compare
BWI76_RS04530 -1.0 -0.8 peptidylprolyl isomerase SurA compare
BWI76_RS11850 -1.0 -5.1 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS08650 -1.0 -1.0 molybdate ABC transporter permease compare
BWI76_RS17570 -1.0 -1.3 iron-sulfur-binding protein compare
BWI76_RS15980 -1.0 -1.0 lysine transporter LysE compare
BWI76_RS05970 -1.0 -1.6 hypothetical protein compare
BWI76_RS26775 -1.0 -2.7 endo-1,4-D-glucanase compare
BWI76_RS09625 -1.0 -0.8 hypothetical protein compare
BWI76_RS05075 -1.0 -0.5 type II secretion system protein GspG compare
BWI76_RS16635 -1.0 -2.4 carbonate dehydratase compare
BWI76_RS22070 -1.0 -2.5 proline/betaine ABC transporter permease ProW compare
BWI76_RS23905 -1.0 -3.2 Z-ring-associated protein compare
BWI76_RS19210 -1.0 -1.8 LuxR family transcriptional regulator compare
BWI76_RS06440 -1.0 -1.6 AP endonuclease compare
BWI76_RS19060 -1.0 -7.6 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS16235 -1.0 -2.2 membrane protein compare
BWI76_RS23830 -1.0 -2.9 hypothetical protein compare
BWI76_RS01905 -1.0 -1.7 envelope stress response protein PspG compare
BWI76_RS09115 -1.0 -2.3 30S ribosomal protein S12 methylthiotransferase RimO compare
BWI76_RS15900 -1.0 -1.8 hypothetical protein compare
BWI76_RS18710 -1.0 -4.7 GGDEF-domain containing protein compare
BWI76_RS23340 -1.0 -1.2 transcriptional regulator compare
BWI76_RS18440 -1.0 -2.9 GtrA-like protein compare
BWI76_RS17975 -1.0 -1.3 tail-specific protease compare
BWI76_RS05840 -1.0 -1.7 glutamate 5-kinase compare
BWI76_RS14680 -1.0 -1.6 SefF compare
BWI76_RS16870 -1.0 -1.2 LysR family transcriptional regulator compare
BWI76_RS14305 -1.0 -2.6 metallophosphoesterase compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in micoeukaryotes experiments

For micoeukaryotes Pelleted after growth overnight in LB+Kan50 across organisms