Experiment set26IT043 for Klebsiella michiganensis M5al

Compare to:

Dictyostellum sp.mixed culture-1

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS21075 +2.4 2.6 membrane protein compare
BWI76_RS10500 +2.3 2.1 flavoprotein monooxygenase compare
BWI76_RS07595 +2.1 2.4 putative oxidoreductase compare
BWI76_RS00965 +2.0 2.2 acetolactate synthase 2 small subunit compare
BWI76_RS14835 +1.9 1.7 hypothetical protein compare
BWI76_RS17370 +1.9 2.2 nitrate transporter NasD compare
BWI76_RS21375 +1.8 2.3 autonomous glycyl radical cofactor GrcA compare
BWI76_RS11335 +1.8 2.2 tautomerase compare
BWI76_RS25060 +1.8 2.3 lipoprotein NlpI compare
BWI76_RS23020 +1.8 1.7 cobalamin biosynthesis protein CbiQ compare
BWI76_RS27735 +1.8 1.9 hypothetical protein compare
BWI76_RS19460 +1.7 2.4 lipoprotein compare
BWI76_RS08720 +1.7 3.4 imidazolonepropionase compare
BWI76_RS23185 +1.7 3.4 propanediol utilization: polyhedral bodies pduT compare
BWI76_RS05260 +1.7 2.6 chaperone compare
BWI76_RS01035 +1.7 3.7 ADP-ribosylation/crystallin J1 compare
BWI76_RS16920 +1.6 1.4 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS08615 +1.6 3.9 galactokinase compare
BWI76_RS03605 +1.6 1.3 BMC domain-containing protein compare
BWI76_RS23520 +1.6 2.5 hypothetical protein compare
BWI76_RS26805 +1.6 2.5 cellulose biosynthesis protein BcsF compare
BWI76_RS20040 +1.6 2.1 tricarboxylic transport membrane protein compare
BWI76_RS14665 +1.5 1.3 minor fimbrial subunit YfcQ compare
BWI76_RS25375 +1.5 1.9 hypothetical protein compare
BWI76_RS07860 +1.5 1.8 cytosine permease compare
BWI76_RS16355 +1.5 1.3 electron transport complex subunit A compare
BWI76_RS10535 +1.5 2.1 Asp/Glu/hydantoin racemase compare
BWI76_RS11810 +1.5 1.7 outer membrane protein OmpW compare
BWI76_RS12670 +1.5 1.4 DNA polymerase V subunit UmuD compare
BWI76_RS14225 +1.4 4.6 anti-ECF sigma factor ChrR compare
BWI76_RS17645 +1.4 1.5 hypothetical protein compare
BWI76_RS27550 +1.4 2.7 hypothetical protein compare
BWI76_RS10560 +1.4 2.1 gamma-glutamyltransferase compare
BWI76_RS07765 +1.4 2.9 thioesterase compare
BWI76_RS07820 +1.4 1.8 S-methyl-5-thioribose kinase compare
BWI76_RS07645 +1.4 2.0 short-chain dehydrogenase/reductase compare
BWI76_RS16515 +1.4 2.5 LysR family transcriptional regulator compare
BWI76_RS20795 +1.4 1.4 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS21570 +1.4 1.6 RnfH family protein compare
BWI76_RS15970 +1.4 3.0 carboxypeptidase M32 compare
BWI76_RS27605 +1.4 1.0 hypothetical protein compare
BWI76_RS21010 +1.4 1.6 Negative regulator of nickel and cobalt uptake (YfgG) (from data) compare
BWI76_RS13805 +1.3 1.8 inorganic diphosphatase compare
BWI76_RS08250 +1.3 2.6 tricarballylate utilization protein B compare
BWI76_RS00075 +1.3 0.9 N-acetylmannosamine-6-phosphate 2-epimerase compare
BWI76_RS23000 +1.3 1.4 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
BWI76_RS02745 +1.3 1.4 hypothetical protein compare
BWI76_RS08925 +1.3 3.8 DNA-binding protein YbiB compare
BWI76_RS06335 +1.3 3.4 nucleoside-specific channel-forming protein Tsx compare
BWI76_RS22350 +1.3 2.6 hydrogenase nickel incorporation protein HypB compare
BWI76_RS20150 +1.3 1.0 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS26270 +1.2 2.1 N-acetyltransferase compare
BWI76_RS01630 +1.2 1.0 16S ribosomal RNA compare
BWI76_RS16470 +1.2 1.7 transcriptional repressor NemR compare
BWI76_RS17375 +1.2 2.4 nitrate ABC transporter, permease protein compare
BWI76_RS16360 +1.2 1.4 electron transport complex subunit RsxB compare
BWI76_RS11455 +1.2 3.0 AraC family transcriptional regulator compare
BWI76_RS08315 +1.2 1.7 K+-transporting ATPase subunit B compare
BWI76_RS24600 +1.2 2.1 dihydroxyacetone kinase compare
BWI76_RS16000 +1.2 1.3 multidrug transporter subunit MdtI compare
BWI76_RS26235 +1.2 1.4 gluconate transporter compare
BWI76_RS09805 +1.2 1.6 hypothetical protein compare
BWI76_RS11915 +1.2 2.2 protease SohB compare
BWI76_RS14390 +1.2 1.9 hypothetical protein compare
BWI76_RS26980 +1.2 2.6 cold-shock protein compare
BWI76_RS25205 +1.2 2.3 hypothetical protein compare
BWI76_RS09400 +1.2 4.0 phage transcriptional activator, Ogr/delta compare
BWI76_RS13130 +1.2 2.5 phenylacetic acid degradation protein PaaD compare
BWI76_RS11390 +1.1 2.0 iron dicitrate transport regulator FecR compare
BWI76_RS06230 +1.1 2.2 DNA-binding response regulator compare
BWI76_RS12980 +1.1 2.4 AraC family transcriptional regulator compare
BWI76_RS12225 +1.1 1.5 hypothetical protein compare
BWI76_RS20375 +1.1 1.5 membrane protein compare
BWI76_RS13980 +1.1 1.2 hypothetical protein compare
BWI76_RS26685 +1.1 2.2 glutathione-disulfide reductase compare
BWI76_RS00440 +1.1 1.5 CopG family transcriptional regulator compare
BWI76_RS08645 +1.1 2.0 molybdate ABC transporter substrate-binding protein compare
BWI76_RS26420 +1.1 1.9 lysoplasmalogenase compare
BWI76_RS16590 +1.1 1.7 short-chain dehydrogenase compare
BWI76_RS05235 +1.1 0.7 hypothetical protein compare
BWI76_RS14620 +1.1 2.1 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase compare
BWI76_RS25245 +1.1 1.2 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
BWI76_RS10725 +1.1 0.9 hypothetical protein compare
BWI76_RS00280 +1.1 2.3 ribose ABC transporter permease compare
BWI76_RS20695 +1.1 1.6 sulfate/thiosulfate transporter permease subunit compare
BWI76_RS07530 +1.0 1.4 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS06045 +1.0 1.9 hypothetical protein compare
BWI76_RS24240 +1.0 1.7 hypothetical protein compare
BWI76_RS27510 +1.0 1.9 aquaporin compare
BWI76_RS00710 +1.0 0.9 6-N-hydroxylaminopurine resistance protein compare
BWI76_RS19775 +1.0 1.4 phage resistance protein compare
BWI76_RS11150 +1.0 1.5 membrane protein compare
BWI76_RS05045 +1.0 1.4 general secretion pathway protein GspM compare
BWI76_RS22840 +1.0 1.5 transposase compare
BWI76_RS12570 +1.0 1.4 DUF1365 domain-containing protein compare
BWI76_RS14145 +1.0 2.6 dihydrolipoyl dehydrogenase compare
BWI76_RS15735 +1.0 2.2 hypothetical protein compare
BWI76_RS03865 +1.0 3.6 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase compare
BWI76_RS02180 +1.0 1.0 hypothetical protein compare
BWI76_RS16080 +1.0 1.4 LysR family transcriptional regulator compare
BWI76_RS07995 +1.0 2.6 twin-arginine translocase subunit TatA compare
BWI76_RS12040 +1.0 1.1 hypothetical protein compare
BWI76_RS15545 +1.0 1.8 hypothetical protein compare
BWI76_RS16115 +1.0 2.0 fumarate hydratase compare
BWI76_RS20970 +1.0 1.2 phosphoribosylglycinamide formyltransferase compare
BWI76_RS03835 +1.0 1.4 4-hydroxyphenylacetate catabolism regulatory protein HpaA compare
BWI76_RS00085 +1.0 1.9 hypothetical protein compare
BWI76_RS19760 +1.0 1.3 GTP-binding protein compare
BWI76_RS04900 +1.0 2.3 DUF2950 domain-containing protein compare
BWI76_RS17800 +1.0 2.0 long-chain-fatty-acid--CoA ligase compare
BWI76_RS18390 +1.0 2.2 hypothetical protein compare
BWI76_RS15350 +1.0 1.0 hypothetical protein compare
BWI76_RS08725 +1.0 1.9 Formiminoglutamase (EC 3.5.3.8) (from data) compare
BWI76_RS17565 +1.0 1.4 hypothetical protein compare
BWI76_RS01900 +1.0 1.6 tRNA-dihydrouridine synthase A compare
BWI76_RS11360 +1.0 1.4 L-asparaginase compare
BWI76_RS19710 +1.0 1.5 NupC/NupG family nucleoside CNT transporter compare
BWI76_RS18125 +1.0 0.9 murein DD-endopeptidase MepM compare
BWI76_RS12665 +1.0 1.0 hypothetical protein compare
BWI76_RS25035 +1.0 1.3 malonate transporter subunit MadM compare
BWI76_RS16165 +1.0 1.0 peptidase M20 compare
BWI76_RS22870 +1.0 2.0 LOG family protein compare
BWI76_RS23965 +1.0 1.6 arginine exporter protein compare
BWI76_RS21345 +1.0 1.5 sigma-E factor regulatory protein RseB compare
BWI76_RS27520 +0.9 2.3 sodium/glutamate symporter compare
BWI76_RS01895 +0.9 1.2 cupin compare
BWI76_RS18030 +0.9 3.2 spore coat protein U compare
BWI76_RS24275 +0.9 2.5 biopolymer transport protein ExbD compare
BWI76_RS21325 +0.9 1.4 hypothetical protein compare
BWI76_RS01060 +0.9 2.7 guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase compare
BWI76_RS13155 +0.9 1.6 hypothetical protein compare
BWI76_RS24010 +0.9 1.6 hypothetical protein compare
BWI76_RS13195 +0.9 1.3 glutamate dehydrogenase compare
BWI76_RS23015 +0.9 1.2 cobalt transporter ATP-binding subunit compare
BWI76_RS11235 +0.9 1.0 hypothetical protein compare
BWI76_RS26730 +0.9 2.8 inner membrane protein YhjD compare
BWI76_RS21200 +0.9 1.5 aldose epimerase compare
BWI76_RS15635 +0.9 1.5 hypothetical protein compare
BWI76_RS15895 +0.9 1.9 starvation-sensing protein RspA compare
BWI76_RS24180 +0.9 0.8 hypothetical protein compare
BWI76_RS18950 +0.9 2.9 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS01840 +0.9 1.8 maltose ABC transporter, ATPase component (MalK) (from data) compare
BWI76_RS24055 +0.9 1.8 MFS transporter compare
BWI76_RS20635 +0.9 1.7 sulfate transporter CysZ compare
BWI76_RS16210 +0.9 0.8 hypothetical protein compare
BWI76_RS04605 +0.9 1.1 thiamine ABC transporter ATP-binding protein compare
BWI76_RS02445 +0.9 2.4 fumarate reductase subunit C compare
BWI76_RS00560 +0.9 1.0 hypothetical protein compare
BWI76_RS04980 +0.9 3.0 hypothetical protein compare
BWI76_RS06595 +0.9 1.6 hypothetical protein compare
BWI76_RS05570 +0.9 1.0 hypothetical protein compare
BWI76_RS20785 +0.9 0.9 ethanolamine utilization protein EutJ compare
BWI76_RS10645 +0.9 2.0 phytanoyl-CoA dioxygenase compare
BWI76_RS15650 +0.9 2.1 gp5 compare
BWI76_RS12825 +0.9 1.5 hypothetical protein compare
BWI76_RS18410 +0.9 2.1 drug/metabolite exporter YedA compare
BWI76_RS23670 +0.9 3.3 alkaline phosphatase compare
BWI76_RS20700 +0.9 3.1 sulfate/thiosulfate transporter subunit compare
BWI76_RS00425 +0.9 1.1 D-tyrosyl-tRNA(Tyr) deacylase compare
BWI76_RS27850 +0.9 1.8 DNA-binding transcriptional regulator DsdC compare
BWI76_RS01225 +0.9 1.6 magnesium transporter CorA compare
BWI76_RS13685 +0.9 0.8 IclR family transcriptional regulator compare
BWI76_RS03100 +0.9 2.5 protein iolH compare
BWI76_RS03910 +0.8 2.6 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
BWI76_RS01595 +0.8 2.1 zinc resistance protein compare
BWI76_RS19890 +0.8 1.1 alpha-ketoglutarate-dependent dioxygenase AlkB compare
BWI76_RS13950 +0.8 2.1 hypothetical protein compare
BWI76_RS24110 +0.8 1.1 YggU family protein compare
BWI76_RS23140 +0.8 1.4 carboxysome shell protein compare
BWI76_RS24775 +0.8 3.4 hypothetical protein compare
BWI76_RS20330 +0.8 1.5 histidine/lysine/arginine/ornithine ABC transporter permease HisQ compare
BWI76_RS08580 +0.8 1.7 quinolinate synthetase compare
BWI76_RS06030 +0.8 2.2 homocysteine S-methyltransferase compare
BWI76_RS05180 +0.8 2.4 serine endoprotease DegQ compare
BWI76_RS25485 +0.8 1.1 septum formation protein Maf compare
BWI76_RS06400 +0.8 1.1 oxidative-stress-resistance chaperone compare
BWI76_RS17045 +0.8 1.1 hypothetical protein compare
BWI76_RS10575 +0.8 1.1 polar amino acid ABC transporter permease compare
BWI76_RS18605 +0.8 0.9 oxidoreductase molybdopterin-binding protein compare
BWI76_RS03610 +0.8 1.5 hypothetical protein compare
BWI76_RS14830 +0.8 1.6 hypothetical protein compare
BWI76_RS10890 +0.8 2.2 glyoxylate/hydroxypyruvate reductase A compare
BWI76_RS25070 +0.8 0.9 hypothetical protein compare
BWI76_RS17320 +0.8 2.3 respiratory nitrate reductase subunit gamma compare
BWI76_RS09690 +0.8 1.1 dimethyl sulfoxide reductase compare
BWI76_RS22235 +0.8 1.5 transcriptional regulator GutM compare
BWI76_RS16905 +0.8 1.5 acetaldehyde dehydrogenase (acetylating) compare
BWI76_RS02855 +0.8 1.4 cytochrome B562 compare
BWI76_RS12585 +0.8 1.2 transcriptional regulator compare
BWI76_RS08950 +0.8 2.6 Asp/Glu/hydantoin racemase compare
BWI76_RS14610 +0.8 1.8 putative hydrolase compare
BWI76_RS08855 +0.8 1.0 endonuclease/exonuclease/phosphatase compare
BWI76_RS14570 +0.8 0.9 hypothetical protein compare
BWI76_RS20855 +0.8 2.1 hypothetical protein compare
BWI76_RS21365 +0.8 1.0 tRNA (adenosine(37)-N6)-methyltransferase TrmM compare
BWI76_RS11825 +0.8 2.6 LysR family transcriptional regulator compare
BWI76_RS10290 +0.8 1.6 transcriptional regulator compare
BWI76_RS21910 +0.8 1.9 glyoxylate/hydroxypyruvate reductase A compare
BWI76_RS21310 +0.8 0.6 DNA repair protein RecO compare
BWI76_RS06910 +0.8 0.9 transcriptional regulator compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in micoeukaryotes experiments

For micoeukaryotes Pelleted after growth overnight in LB+Kan50 across organisms