Experiment set25S8 for Pseudomonas fluorescens SBW25-INTG

Compare to:

D-Fructose carbon source

200 most detrimental genes:

  gene name fitness t score description  
PFLU_RS04005 +2.6 20.9 catabolite repressor/activator conserved
PFLU_RS22645 +2.1 15.8 EamA family transporter compare
PFLU_RS10765 +2.1 13.3 UvrY/SirA/GacA family response regulator transcription factor compare
PFLU_RS18410 +1.7 8.4 response regulator compare
PFLU_RS29480 +1.6 13.2 exodeoxyribonuclease III compare
PFLU_RS13795 +1.6 2.7 hypothetical protein compare
PFLU_RS25215 +1.3 8.8 cytochrome o ubiquinol oxidase subunit I compare
PFLU_RS22075 +1.3 9.7 DUF3108 domain-containing protein compare
PFLU_RS04660 +1.3 5.9 division/cell wall cluster transcriptional repressor MraZ compare
PFLU_RS24255 +1.3 8.6 pyruvate kinase compare
PFLU_RS29810 +1.3 8.4 LysR family transcriptional regulator compare
PFLU_RS22455 +1.3 8.2 hypothetical protein compare
PFLU_RS00460 +1.3 8.7 glutamate/aspartate:proton symporter GltP compare
PFLU_RS08665 +1.2 4.9 cytochrome c maturation protein CcmE compare
PFLU_RS25220 +1.2 7.1 ubiquinol oxidase subunit II compare
PFLU_RS10300 +1.2 10.0 transaldolase compare
PFLU_RS25210 +1.2 5.1 cytochrome o ubiquinol oxidase subunit III compare
PFLU_RS15195 +1.1 3.6 LacI family transcriptional regulator compare
PFLU_RS26290 +1.1 1.6 2Fe-2S iron-sulfur cluster binding domain-containing protein compare
PFLU_RS18725 +1.1 1.9 alpha/beta hydrolase compare
PFLU_RS23920 +1.1 2.1 septation protein A compare
PFLU_RS08350 +1.1 2.3 ABC transporter ATP-binding protein compare
PFLU_RS31545 +1.1 2.4 LysR family transcriptional regulator compare
PFLU_RS09500 +1.1 1.3 hypothetical protein compare
PFLU_RS12175 +1.0 1.1 methyl-accepting chemotaxis protein compare
PFLU_RS22635 +1.0 8.4 kinase/pyrophosphorylase compare
PFLU_RS11685 +1.0 3.4 AraC family transcriptional regulator compare
PFLU_RS08655 +0.9 2.9 heme ABC transporter permease compare
PFLU_RS12715 +0.9 1.6 fumarylacetoacetate hydrolase family protein compare
PFLU_RS03960 +0.9 1.6 tRNA-Thr compare
PFLU_RS29155 +0.9 3.2 mechanosensitive ion channel family protein compare
PFLU_RS04165 +0.9 4.5 cell division protein ZapE compare
PFLU_RS25200 +0.9 5.5 protoheme IX farnesyltransferase compare
PFLU_RS10320 +0.9 5.9 class I SAM-dependent methyltransferase compare
PFLU_RS05020 +0.9 1.8 DUF1120 domain-containing protein compare
PFLU_RS20435 +0.9 2.7 heavy metal response regulator transcription factor compare
PFLU_RS23730 +0.9 6.8 MurR/RpiR family transcriptional regulator compare
PFLU_RS13315 +0.9 2.4 class I SAM-dependent methyltransferase compare
PFLU_RS09480 +0.9 1.9 hypothetical protein compare
PFLU_RS08670 +0.9 4.3 heme lyase CcmF/NrfE family subunit compare
PFLU_RS25940 +0.9 7.2 FCD domain-containing protein compare
PFLU_RS24670 +0.9 2.1 HigA family addiction module antidote protein compare
PFLU_RS02515 +0.9 2.7 flagellar motor protein MotB compare
PFLU_RS23885 +0.8 2.1 transposase compare
PFLU_RS15785 +0.8 2.6 type II secretion system protein GspH compare
PFLU_RS16045 +0.8 3.3 aromatic ring-hydroxylating dioxygenase subunit alpha compare
PFLU_RS12680 +0.8 2.9 DUF3995 domain-containing protein compare
PFLU_RS19015 +0.8 5.0 anti-sigma factor compare
PFLU_RS08490 +0.8 1.2 DEAD/DEAH box helicase compare
PFLU_RS23325 +0.8 5.6 GlxA family transcriptional regulator compare
PFLU_RS05880 +0.8 3.5 CinA family protein compare
PFLU_RS19050 +0.8 2.0 spore coat protein U domain-containing protein compare
PFLU_RS18395 +0.8 1.5 MotA/TolQ/ExbB proton channel family protein compare
PFLU_RS12260 +0.8 1.2 hypothetical protein compare
PFLU_RS09505 +0.8 2.6 HU family DNA-binding protein compare
PFLU_RS20790 +0.8 2.8 heme-binding protein compare
PFLU_RS00395 +0.8 6.2 DNA polymerase I compare
PFLU_RS08650 +0.8 2.5 heme exporter protein CcmB compare
PFLU_RS17675 +0.8 2.3 hypothetical protein compare
PFLU_RS23390 +0.8 2.2 AbrB/MazE/SpoVT family DNA-binding domain-containing protein compare
PFLU_RS29780 +0.8 3.7 acyl-CoA thioesterase compare
PFLU_RS21690 +0.8 2.6 DNA-binding protein compare
PFLU_RS16250 +0.8 3.1 hypothetical protein compare
PFLU_RS06630 +0.8 2.1 ABC transporter ATP-binding protein compare
PFLU_RS13715 +0.7 1.0 MmcQ/YjbR family DNA-binding protein compare
PFLU_RS28315 +0.7 0.9 response regulator compare
PFLU_RS31075 +0.7 3.7 hypothetical protein compare
PFLU_RS13385 +0.7 2.4 mannitol dehydrogenase family protein compare
PFLU_RS29280 +0.7 4.2 tyrosine recombinase XerC compare
PFLU_RS15760 +0.7 3.0 general secretion pathway protein GspL compare
PFLU_RS21530 +0.7 5.7 transporter substrate-binding domain-containing protein compare
PFLU_RS31530 +0.7 1.0 transposase compare
PFLU_RS02510 +0.7 5.6 flagellar motor stator protein MotA compare
PFLU_RS20015 +0.7 1.5 transporter compare
PFLU_RS24980 +0.7 1.7 purine-binding chemotaxis protein CheW compare
PFLU_RS14690 +0.7 2.4 hypothetical protein compare
PFLU_RS14035 +0.7 3.3 hypothetical protein compare
PFLU_RS22600 +0.7 1.8 RNA polymerase sigma factor SigX compare
PFLU_RS15380 +0.7 2.3 DUF1652 domain-containing protein compare
PFLU_RS15585 +0.7 5.1 acyl-CoA oxidase compare
PFLU_RS12825 +0.7 2.0 peptidyl-prolyl cis-trans isomerase compare
PFLU_RS02625 +0.7 5.0 ribonuclease R compare
PFLU_RS08575 +0.7 2.2 hypothetical protein compare
PFLU_RS25205 +0.7 2.6 cytochrome o ubiquinol oxidase subunit IV compare
PFLU_RS12725 +0.7 1.9 GNAT family N-acetyltransferase compare
PFLU_RS07735 +0.7 2.4 PilZ domain-containing protein compare
PFLU_RS29815 +0.7 2.6 aspartate ammonia-lyase compare
PFLU_RS29095 +0.7 6.1 polyphosphate kinase 1 compare
PFLU_RS04075 +0.7 1.3 hypothetical protein compare
PFLU_RS02575 +0.7 4.4 GTPase HflX compare
PFLU_RS00895 +0.7 1.6 hypothetical protein compare
PFLU_RS18185 +0.7 3.3 SDR family oxidoreductase compare
PFLU_RS17060 +0.7 1.1 monooxygenase compare
PFLU_RS31630 +0.7 1.6 hypothetical protein compare
PFLU_RS13975 +0.6 1.0 hypothetical protein compare
PFLU_RS00485 +0.6 3.0 ABC transporter permease compare
PFLU_RS00040 +0.6 5.4 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
PFLU_RS10985 +0.6 2.0 amino acid ABC transporter permease compare
PFLU_RS06430 +0.6 4.6 RNA polymerase sigma factor RpoS compare
PFLU_RS02045 +0.6 5.8 glutamate synthase large subunit compare
PFLU_RS05695 +0.6 3.2 bacterioferritin compare
PFLU_RS29890 +0.6 3.5 transcriptional regulator HexR compare
PFLU_RS21110 +0.6 1.8 AAA family ATPase compare
PFLU_RS27745 +0.6 2.6 amino acid ABC transporter ATP-binding protein compare
PFLU_RS12110 +0.6 2.9 L-iditol 2-dehydrogenase conserved
PFLU_RS28250 +0.6 1.1 malonate decarboxylase holo-ACP synthase compare
PFLU_RS19270 +0.6 3.0 copper homeostasis periplasmic binding protein CopC compare
PFLU_RS05060 +0.6 1.8 GIY-YIG nuclease family protein compare
PFLU_RS15325 +0.6 2.7 HlyD family type I secretion periplasmic adaptor subunit compare
PFLU_RS22640 +0.6 4.1 PLP-dependent aminotransferase family protein compare
PFLU_RS05890 +0.6 0.7 recombination regulator RecX compare
PFLU_RS28310 +0.6 1.2 response regulator compare
PFLU_RS17355 +0.6 1.9 creatininase family protein compare
PFLU_RS17265 +0.6 1.6 hypothetical protein compare
PFLU_RS01675 +0.6 2.3 tRNA (cytidine(34)-2'-O)-methyltransferase compare
PFLU_RS13885 +0.6 1.1 hypothetical protein compare
PFLU_RS02150 +0.6 2.2 acyl carrier protein compare
PFLU_RS13030 +0.6 2.5 cobalt transporter compare
PFLU_RS14805 +0.6 0.7 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
PFLU_RS19930 +0.6 2.1 type II secretion system protein GspG compare
PFLU_RS18990 +0.6 2.5 DUF3077 domain-containing protein compare
PFLU_RS24135 +0.6 2.4 HIT domain-containing protein compare
PFLU_RS19590 +0.6 2.7 pyridoxamine 5'-phosphate oxidase compare
PFLU_RS15045 +0.6 2.1 glycosyl hydrolase compare
PFLU_RS12815 +0.6 2.6 amino acid deaminase compare
PFLU_RS13710 +0.6 1.5 DUF1294 domain-containing protein compare
PFLU_RS28820 +0.6 1.1 aliphatic sulfonates ABC transporter ATP-binding protein compare
PFLU_RS30790 +0.6 1.4 hypothetical protein compare
PFLU_RS07630 +0.6 4.6 transglycosylase SLT domain-containing protein compare
PFLU_RS10595 +0.6 1.4 hypothetical protein compare
PFLU_RS13605 +0.6 1.4 DUF4880 domain-containing protein compare
PFLU_RS16050 +0.6 2.3 oxidoreductase compare
PFLU_RS26400 +0.6 1.3 HAD family hydrolase compare
PFLU_RS30390 +0.6 1.2 type III secretion system rspB compare
PFLU_RS24130 +0.6 1.3 protein SlyX compare
PFLU_RS22535 +0.5 4.3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase compare
PFLU_RS25190 +0.5 0.7 hypothetical protein compare
PFLU_RS04150 +0.5 2.9 DUF1043 family protein compare
PFLU_RS30615 +0.5 1.5 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme compare
PFLU_RS14235 +0.5 1.6 iron transporter compare
PFLU_RS17900 +0.5 2.4 acetyltransferase compare
PFLU_RS17580 +0.5 1.1 repressor LexA compare
PFLU_RS08600 +0.5 2.4 glutaredoxin family protein compare
PFLU_RS31740 +0.5 2.1 hypothetical protein compare
PFLU_RS14385 +0.5 2.2 hypothetical protein compare
PFLU_RS11745 +0.5 2.3 xylose isomerase compare
PFLU_RS19875 +0.5 1.5 amino acid ABC transporter ATP-binding protein compare
PFLU_RS21910 +0.5 4.3 BamA/TamA family outer membrane protein compare
PFLU_RS31200 +0.5 1.9 hypothetical protein compare
PFLU_RS22390 +0.5 1.5 hypothetical protein compare
PFLU_RS06620 +0.5 1.4 DUF2282 domain-containing protein compare
PFLU_RS04520 +0.5 3.0 hypothetical protein compare
PFLU_RS08525 +0.5 2.0 glutathione peroxidase compare
PFLU_RS11875 +0.5 2.0 general secretion pathway protein GspK compare
PFLU_RS25115 +0.5 1.4 cytochrome c family protein compare
PFLU_RS05750 +0.5 1.2 methionine--tRNA ligase compare
PFLU_RS26955 +0.5 3.5 sugar nucleotide-binding protein compare
PFLU_RS12840 +0.5 1.6 3-hydroxybutyrate dehydrogenase compare
PFLU_RS08485 +0.5 1.2 crotonase/enoyl-CoA hydratase family protein compare
PFLU_RS12580 +0.5 2.9 MurR/RpiR family transcriptional regulator compare
PFLU_RS21575 +0.5 1.1 pyrimidine/purine nucleoside phosphorylase compare
PFLU_RS21295 +0.5 3.2 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
PFLU_RS31305 +0.5 1.5 cell wall hydrolase compare
PFLU_RS14420 +0.5 1.0 chemotactic transduction protein ChpE compare
PFLU_RS29070 +0.5 2.0 hypothetical protein compare
PFLU_RS23345 +0.5 3.4 ABC transporter permease compare
PFLU_RS13850 +0.5 1.5 hypothetical protein compare
PFLU_RS15165 +0.5 0.9 RidA family protein compare
PFLU_RS12205 +0.5 1.3 DNA binding protein compare
PFLU_RS12210 +0.5 0.9 hypothetical protein compare
PFLU_RS16110 +0.5 1.6 benzaldehyde dehydrogenase compare
PFLU_RS13705 +0.5 2.1 undecaprenyl-diphosphate phosphatase compare
PFLU_RS17750 +0.5 1.3 pirin family protein compare
PFLU_RS24175 +0.5 2.4 bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ compare
PFLU_RS11135 +0.5 2.2 substrate-binding domain-containing protein compare
PFLU_RS16800 +0.5 2.3 MFS transporter compare
PFLU_RS10995 +0.5 1.1 amino acid ABC transporter ATP-binding protein compare
PFLU_RS22470 +0.5 1.0 hypothetical protein compare
PFLU_RS07665 +0.5 1.3 type I DNA topoisomerase compare
PFLU_RS16620 +0.5 2.7 pyridoxal-phosphate dependent enzyme compare
PFLU_RS28990 +0.5 3.4 flagellar basal body-associated protein FliL compare
PFLU_RS29745 +0.5 1.6 response regulator compare
PFLU_RS03925 +0.5 1.9 hypothetical protein compare
PFLU_RS28395 +0.5 2.7 DUF4426 domain-containing protein compare
PFLU_RS03570 +0.5 0.7 hypothetical protein compare
PFLU_RS09335 +0.5 1.8 hypothetical protein compare
PFLU_RS03380 +0.5 1.8 chromosome partitioning protein compare
PFLU_RS11990 +0.5 1.2 hypothetical protein compare
PFLU_RS19715 +0.5 2.1 Lrp/AsnC family transcriptional regulator compare
PFLU_RS20395 +0.5 3.1 deoxyribonuclease compare
PFLU_RS24690 +0.5 3.5 membrane-bound lytic murein transglycosylase MltF compare
PFLU_RS24305 +0.5 1.4 antibiotic biosynthesis monooxygenase compare
PFLU_RS26710 +0.5 2.0 MaoC family dehydratase compare
PFLU_RS14000 +0.5 1.9 hypothetical protein compare
PFLU_RS30550 +0.5 1.6 IS66 family insertion sequence hypothetical protein compare
PFLU_RS11670 +0.5 1.2 SDR family oxidoreductase compare
PFLU_RS02700 +0.5 1.8 ammonia-dependent NAD(+) synthetase compare
PFLU_RS15600 +0.5 1.3 ketoacyl-ACP synthase III compare
PFLU_RS11515 +0.5 1.9 DUF1330 domain-containing protein compare
PFLU_RS08375 +0.5 3.5 N-acetyltransferase compare


Specific Phenotypes

For 6 genes in this experiment

For carbon source D-Fructose in Pseudomonas fluorescens SBW25-INTG

For carbon source D-Fructose across organisms