Experiment set25S57 for Pseudomonas fluorescens SBW25-INTG

Compare to:

4-Aminobutyric acid carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
PFLU_RS00915 -3.3 -15.1 4-aminobutyrate--2-oxoglutarate transaminase conserved
PFLU_RS05090 -2.5 -15.6 fumarylacetoacetase compare
PFLU_RS03235 -2.4 -6.2 Cu(I)-responsive transcriptional regulator compare
PFLU_RS18915 -1.9 -8.9 translocation/assembly module TamB compare
PFLU_RS01545 -1.9 -12.1 GABA permease conserved
PFLU_RS18920 -1.8 -9.1 outer membrane protein assembly factor compare
PFLU_RS08685 -1.7 -7.0 c-type cytochrome biogenesis protein CcmI compare
PFLU_RS03325 -1.6 -6.8 aspartate aminotransferase family protein conserved
PFLU_RS18970 -1.6 -6.7 methylcrotonoyl-CoA carboxylase compare
PFLU_RS03320 -1.5 -6.8 LysR family transcriptional regulator compare
PFLU_RS01435 -1.5 -6.4 agmatine deiminase compare
PFLU_RS18965 -1.4 -8.6 isovaleryl-CoA dehydrogenase compare
PFLU_RS22685 -1.4 -6.8 2-methylcitrate synthase compare
PFLU_RS26745 -1.4 -5.4 aldehyde dehydrogenase conserved
PFLU_RS18980 -1.2 -5.5 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha compare
PFLU_RS27555 -1.1 -6.9 FAD-dependent oxidoreductase compare
PFLU_RS22130 +1.1 7.0 cytosine permease compare
PFLU_RS06005 +1.2 5.3 gamma-aminobutyraldehyde dehydrogenase compare
PFLU_RS00880 +1.2 6.4 DUF927 domain-containing protein compare
PFLU_RS28290 +1.3 6.9 chemotaxis protein CheW compare
PFLU_RS07770 +1.4 7.5 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF compare
PFLU_RS23510 +1.5 10.2 5-oxoprolinase subunit PxpA compare
PFLU_RS23315 +2.0 11.8 aspartate aminotransferase family protein compare
PFLU_RS00075 +2.1 12.1 Trk system potassium transporter TrkA compare
PFLU_RS30335 +2.1 8.0 AlpA family phage regulatory protein compare
PFLU_RS09840 +2.3 10.9 5-oxoprolinase subunit PxpA compare
PFLU_RS23830 +2.3 15.4 TrkH family potassium uptake protein compare
PFLU_RS28780 +2.4 13.0 aspartate aminotransferase family protein compare
PFLU_RS06625 +2.5 10.8 ABC transporter ATP-binding protein compare
PFLU_RS06635 +2.7 22.1 high-affinity branched-chain amino acid ABC transporter permease LivM compare
PFLU_RS06640 +2.8 24.0 high-affinity branched-chain amino acid ABC transporter permease LivH compare
PFLU_RS06645 +2.9 23.8 branched-chain amino acid ABC transporter substrate-binding protein compare
PFLU_RS22125 +3.6 8.9 ketosteroid isomerase compare


Specific phenotypes for carbon source 4-Aminobutyric acid across organisms