Experiment set25S550 for Pseudomonas fluorescens FW300-N2E2

Compare to:

Ying_Others16 rep B; time point 3

Genes with specific phenotypes:

  gene name fitness t score description  
Pf6N2E2_4717 -2.2 -7.7 Serine hydroxymethyltransferase (EC 2.1.2.1) compare
Pf6N2E2_4720 -2.1 -12.2 Sarcosine oxidase alpha subunit (EC 1.5.3.1) compare
Pf6N2E2_4719 -2.0 -5.2 Sarcosine oxidase delta subunit (EC 1.5.3.1) compare
Pf6N2E2_4701 -1.8 -7.4 FIG00953113: hypothetical protein compare
Pf6N2E2_4704 -1.8 -5.6 Dimethylglycine dehydrogenase (ferredoxin), FeS subunit DgcB (EC 1.5.7.-) (from data) compare
Pf6N2E2_4702 -1.6 -7.8 DgcA Dimethylglycine demethylase subunit A compare
Pf6N2E2_4690 -1.4 -5.2 L-carnitine 3-dehydrogenase, A subunit (EC 1.1.1.108) (from data) compare
Pf6N2E2_3816 -1.2 -7.7 Glycogen phosphorylase (EC 2.4.1.1) compare
Pf6N2E2_3334 -1.0 -5.1 Ornithine decarboxylase (EC 4.1.1.17) / Arginine decarboxylase (EC 4.1.1.19) compare
Pf6N2E2_4689 -1.0 -5.3 L-carnitine 3-dehydrogenase, B subunit (EC 1.1.1.108) (from data) compare
Pf6N2E2_3858 +1.1 7.4 Amino acid ABC transporter, permease protein compare
Pf6N2E2_3855 +1.1 7.0 Histidine ABC transporter, ATP-binding protein HisP (TC 3.A.1.3.1) compare
Pf6N2E2_5662 +1.5 7.5 L-Arginine ABC transporter, permease protein AotM (from data) compare
Pf6N2E2_3856 +1.6 10.7 Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1) compare
Pf6N2E2_5660 +1.8 10.0 L-Arginine ABC transporter, periplasmic substrate-binding component (from data) compare
Pf6N2E2_5059 +8.4 13.6 Transcriptional regulator, TetR family compare


Specific phenotypes for carbon source Ying_Others16 across organisms