Experiment set23IT028 for Klebsiella michiganensis M5al

Compare to:

Vogels_fungal_media 0.1X

200 most important genes:

  gene name fitness t score description  
BWI76_RS04465 -10.2 -7.0 carbamoyl-phosphate synthase small subunit compare
BWI76_RS02995 -9.9 -9.6 aspartate carbamoyltransferase compare
BWI76_RS04470 -9.7 -13.4 carbamoyl phosphate synthase large subunit compare
BWI76_RS11965 -8.6 -5.3 orotidine-5'-phosphate decarboxylase compare
BWI76_RS20355 -7.9 -4.2 colicin V production protein compare
BWI76_RS16965 -7.9 -3.5 murein lipoprotein compare
BWI76_RS10990 -7.6 -3.6 dihydroorotase compare
BWI76_RS09645 -7.2 -2.2 thioredoxin-disulfide reductase compare
BWI76_RS18950 -6.7 -4.9 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS27385 -6.4 -8.8 orotate phosphoribosyltransferase compare
BWI76_RS05840 -6.1 -5.9 glutamate 5-kinase compare
BWI76_RS09760 -6.0 -5.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS25920 -6.0 -3.1 peptidylprolyl isomerase compare
BWI76_RS09910 -5.8 -15.7 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS15825 -5.4 -2.9 hypothetical protein compare
BWI76_RS23265 -5.3 -4.7 hypothetical protein compare
BWI76_RS17720 -5.3 -1.6 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS04250 -5.2 -6.6 homoserine kinase compare
BWI76_RS04675 -5.2 -4.8 3-isopropylmalate dehydrogenase compare
BWI76_RS07065 -5.0 -6.1 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS04510 -5.0 -2.6 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS20350 -4.9 -4.6 amidophosphoribosyltransferase compare
BWI76_RS20965 -4.9 -3.1 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS08385 -4.8 -3.6 citrate (Si)-synthase compare
BWI76_RS08535 -4.8 -2.4 translocation protein TolB compare
BWI76_RS00855 -4.8 -8.1 argininosuccinate lyase compare
BWI76_RS15110 -4.7 -16.1 putative excinuclease ABC subunit A compare
BWI76_RS01210 -4.6 -2.3 tyrosine recombinase XerC compare
BWI76_RS04255 -4.6 -8.3 threonine synthase compare
BWI76_RS00850 -4.6 -8.2 acetylglutamate kinase compare
BWI76_RS03010 -4.5 -8.2 ornithine carbamoyltransferase compare
BWI76_RS04670 -4.4 -7.3 3-isopropylmalate dehydratase large subunit compare
BWI76_RS01610 -4.4 -5.9 phosphoribosylamine--glycine ligase compare
BWI76_RS20390 -4.3 -3.2 erythronate-4-phosphate dehydrogenase compare
BWI76_RS18935 -4.2 -8.3 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS00805 -4.2 -3.7 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS26085 -4.2 -2.2 3-dehydroquinate synthase compare
BWI76_RS08520 -4.2 -2.1 colicin transporter TolQ compare
BWI76_RS00845 -4.1 -6.7 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS21360 -4.0 -6.2 L-aspartate oxidase compare
BWI76_RS00980 -4.0 -9.6 PLP-dependent threonine dehydratase compare
BWI76_RS23220 -4.0 -6.1 amino-acid N-acetyltransferase compare
BWI76_RS21265 -4.0 -9.6 phosphoribosylformylglycinamidine synthase compare
BWI76_RS18925 -4.0 -9.2 histidinol dehydrogenase compare
BWI76_RS11850 -4.0 -6.7 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS15115 -4.0 -3.8 MFS transporter compare
BWI76_RS00975 -3.9 -9.9 dihydroxy-acid dehydratase compare
BWI76_RS04665 -3.9 -15.2 3-isopropylmalate dehydratase small subunit compare
BWI76_RS01615 -3.9 -8.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS08525 -3.9 -4.8 colicin transporter compare
BWI76_RS21475 -3.9 -4.5 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS01655 -3.8 -5.8 homoserine O-succinyltransferase compare
BWI76_RS09755 -3.8 -4.6 phosphoserine transaminase compare
BWI76_RS24285 -3.8 -6.0 cystathionine beta-lyase compare
BWI76_RS25315 -3.7 -8.7 glutamate synthase large subunit compare
BWI76_RS18930 -3.7 -3.5 histidinol-phosphate transaminase compare
BWI76_RS27390 -3.7 -3.5 ribonuclease PH compare
BWI76_RS09660 -3.6 -2.4 DNA translocase FtsK compare
BWI76_RS04845 -3.6 -5.8 nicotinate-nucleotide pyrophosphorylase compare
BWI76_RS26075 -3.6 -5.1 DNA adenine methylase compare
BWI76_RS04680 -3.6 -8.9 2-isopropylmalate synthase compare
BWI76_RS07070 -3.5 -3.8 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS25115 -3.4 -4.9 argininosuccinate synthase compare
BWI76_RS25320 -3.4 -4.4 glutamate synthase compare
BWI76_RS12090 -3.4 -3.1 HNH endonuclease compare
BWI76_RS05120 -3.3 -10.2 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS00990 -3.3 -8.5 ketol-acid reductoisomerase compare
BWI76_RS11860 -3.3 -5.9 anthranilate synthase component I compare
BWI76_RS02735 -3.3 -3.4 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS04245 -3.3 -10.0 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS23240 -3.3 -2.3 exonuclease V subunit gamma compare
BWI76_RS04525 -3.3 -2.1 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS00390 -3.3 -8.0 two-component system sensor histidine kinase NtrB compare
BWI76_RS20995 -3.2 -5.8 RNA degradosome polyphosphate kinase compare
BWI76_RS18920 -3.2 -3.5 ATP phosphoribosyltransferase compare
BWI76_RS25645 -3.2 -6.3 shikimate dehydrogenase compare
BWI76_RS04685 -3.2 -8.1 putative leucine operon leader peptide compare
BWI76_RS00835 -3.1 -11.5 phosphoenolpyruvate carboxylase compare
BWI76_RS04645 -3.1 -4.8 3-dehydroquinase compare
BWI76_RS26460 -3.1 -6.5 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS23365 -3.1 -6.7 LysR family transcriptional regulator compare
BWI76_RS00400 -3.1 -1.6 glutamine synthetase compare
BWI76_RS04160 -3.0 -3.9 phosphoserine phosphatase compare
BWI76_RS04240 -3.0 -2.9 thr operon leader peptide compare
BWI76_RS20435 -3.0 -1.3 chorismate synthase compare
BWI76_RS11855 -2.9 -6.4 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS00785 -2.9 -6.2 cystathionine gamma-synthase compare
BWI76_RS20650 -2.9 -1.8 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS19845 -2.9 -4.3 phosphatase compare
BWI76_RS11840 -2.8 -2.7 tryptophan synthase subunit alpha compare
BWI76_RS00180 -2.8 -1.2 F0F1 ATP synthase subunit epsilon compare
BWI76_RS23920 -2.8 -3.3 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS18955 -2.8 -4.9 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS18940 -2.6 -3.4 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS00385 -2.6 -4.5 nitrogen assimilation regulatory protein compare
BWI76_RS00600 -2.6 -5.3 LacI family transcriptional regulator compare
BWI76_RS11845 -2.6 -3.6 tryptophan synthase subunit beta compare
BWI76_RS23230 -2.6 -1.8 exodeoxyribonuclease V subunit beta compare
BWI76_RS15990 -2.6 -7.0 serine protease compare
BWI76_RS20895 -2.6 -2.8 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS27430 -2.5 -1.5 (p)ppGpp synthetase compare
BWI76_RS01280 -2.5 -8.6 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
BWI76_RS11610 -2.5 -3.1 glutamate dehydrogenase compare
BWI76_RS24850 -2.5 -5.5 DeoR family transcriptional regulator compare
BWI76_RS22760 -2.5 -5.1 sulfite reductase subunit beta compare
BWI76_RS22755 -2.4 -5.4 phosphoadenosine phosphosulfate reductase compare
BWI76_RS01220 -2.4 -5.5 DNA-dependent helicase II compare
BWI76_RS09970 -2.4 -1.9 porin OmpA compare
BWI76_RS15850 -2.4 -1.0 DUF1317 domain-containing protein compare
BWI76_RS08580 -2.3 -2.8 quinolinate synthetase compare
BWI76_RS15840 -2.2 -3.0 prophage protein compare
BWI76_RS23360 -2.2 -1.7 diaminopimelate decarboxylase compare
BWI76_RS00965 -2.2 -1.2 acetolactate synthase 2 small subunit compare
BWI76_RS22765 -2.2 -9.4 sulfite reductase subunit alpha compare
BWI76_RS02580 -2.2 -1.7 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS01800 -2.1 -3.7 glucose-6-phosphate isomerase compare
BWI76_RS26775 -2.1 -3.9 endo-1,4-D-glucanase compare
BWI76_RS06530 -2.1 -3.5 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS26455 -2.1 -3.0 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS01275 -2.1 -5.2 LysR family transcriptional regulator compare
BWI76_RS21465 -2.1 -4.4 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS06525 -2.1 -2.9 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS21370 -2.0 -1.2 ATP-dependent RNA helicase SrmB compare
BWI76_RS25335 -2.0 -2.4 stringent starvation protein A compare
BWI76_RS05200 -2.0 -2.1 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS22690 -2.0 -3.7 adenylyl-sulfate kinase compare
BWI76_RS02410 -2.0 -1.4 EF-P beta-lysylation protein EpmB compare
BWI76_RS09640 -2.0 -1.9 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS13215 -2.0 -1.6 type I glyceraldehyde-3-phosphate dehydrogenase compare
BWI76_RS19325 -2.0 -2.0 mandelate racemase compare
BWI76_RS18165 -1.9 -1.3 NUDIX pyrophosphatase compare
BWI76_RS17975 -1.9 -3.7 tail-specific protease compare
BWI76_RS27440 -1.9 -3.0 DNA helicase RecG compare
BWI76_RS00960 -1.9 -3.2 acetolactate synthase 2 catalytic subunit compare
BWI76_RS25065 -1.8 -2.5 polyribonucleotide nucleotidyltransferase compare
BWI76_RS15830 -1.8 -2.4 hypothetical protein compare
BWI76_RS00715 -1.8 -3.5 two-component sensor histidine kinase compare
BWI76_RS06335 -1.8 -2.7 nucleoside-specific channel-forming protein Tsx compare
BWI76_RS05450 -1.8 -1.3 ribonuclease HI compare
BWI76_RS10930 -1.8 -7.4 glucan biosynthesis protein G compare
BWI76_RS25070 -1.8 -1.5 hypothetical protein compare
BWI76_RS13595 -1.8 -4.0 transcriptional regulator compare
BWI76_RS19310 -1.7 -2.0 ABC transporter permease compare
BWI76_RS17290 -1.7 -1.9 formyltetrahydrofolate deformylase compare
BWI76_RS20970 -1.7 -1.4 phosphoribosylglycinamide formyltransferase compare
BWI76_RS05835 -1.7 -1.7 gamma-glutamyl-phosphate reductase compare
BWI76_RS16355 -1.6 -1.5 electron transport complex subunit A compare
BWI76_RS05015 -1.6 -2.0 transcriptional regulator compare
BWI76_RS15835 -1.6 -1.3 hypothetical protein compare
BWI76_RS25060 -1.6 -3.3 lipoprotein NlpI compare
BWI76_RS15225 -1.6 -3.2 DeoR family transcriptional regulator compare
BWI76_RS12340 -1.6 -3.8 molecular chaperone Tir compare
BWI76_RS10935 -1.6 -4.3 glucan biosynthesis glucosyltransferase H compare
BWI76_RS21165 -1.5 -1.8 Fe-S cluster assembly transcriptional regulator IscR compare
BWI76_RS13435 -1.5 -1.3 hypothetical protein compare
BWI76_RS26570 -1.5 -2.2 anion permease compare
BWI76_RS04705 -1.5 -4.3 DNA-binding transcriptional regulator FruR compare
BWI76_RS11435 -1.5 -2.0 hypothetical protein compare
BWI76_RS09825 -1.5 -4.6 envelope biogenesis factor ElyC compare
BWI76_RS04270 -1.5 -3.3 transaldolase compare
BWI76_RS26395 -1.5 -4.3 cell division protein FtsE compare
BWI76_RS26390 -1.5 -3.5 cell division protein FtsX compare
BWI76_RS24955 -1.5 -1.7 hypothetical protein compare
BWI76_RS09030 -1.5 -3.0 transpeptidase compare
BWI76_RS26620 -1.5 -1.0 Fe-S biogenesis protein NfuA compare
BWI76_RS25205 -1.4 -2.0 hypothetical protein compare
BWI76_RS19770 -1.4 -1.7 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS01205 -1.4 -2.7 DUF484 family protein compare
BWI76_RS12190 -1.4 -3.6 glycoside hydrolase family protein compare
BWI76_RS21310 -1.4 -1.1 DNA repair protein RecO compare
BWI76_RS09655 -1.4 -3.5 leucine-responsive regulatory protein compare
BWI76_RS12255 -1.4 -6.2 hypothetical protein compare
BWI76_RS09025 -1.4 -1.7 GntR family transcriptional regulator compare
BWI76_RS16895 -1.3 -1.2 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS04305 -1.3 -0.9 molecular chaperone DnaJ compare
BWI76_RS12200 -1.3 -1.8 hypothetical protein compare
BWI76_RS12235 -1.3 -2.3 hypothetical protein compare
BWI76_RS08750 -1.3 -1.2 kinase inhibitor compare
BWI76_RS05915 -1.3 -2.3 helix-turn-helix transcriptional regulator compare
BWI76_RS08605 -1.3 -1.6 phosphoglyceromutase compare
BWI76_RS13480 -1.2 -1.2 XRE family transcriptional regulator compare
BWI76_RS21350 -1.2 -1.2 anti-RNA polymerase sigma factor SigE compare
BWI76_RS12280 -1.2 -1.9 hypothetical protein compare
BWI76_RS01325 -1.2 -0.9 twin-arginine translocase subunit TatB compare
BWI76_RS01195 -1.2 -1.3 membrane protein compare
BWI76_RS21505 -1.2 -1.1 hypothetical protein compare
BWI76_RS19865 -1.2 -1.7 ecotin compare
BWI76_RS14980 -1.2 -1.4 hypothetical protein compare
BWI76_RS08180 -1.2 -4.5 asparagine synthase B compare
BWI76_RS26410 -1.2 -1.6 membrane protein compare
BWI76_RS13400 -1.2 -1.9 GntR family transcriptional regulator compare
BWI76_RS22095 -1.2 -2.3 multidrug export protein EmrA compare
BWI76_RS08210 -1.2 -1.0 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS16260 -1.2 -1.4 two-component sensor histidine kinase compare
BWI76_RS26055 -1.2 -3.7 siroheme synthase compare
BWI76_RS14065 -1.2 -1.4 hypothetical protein compare
BWI76_RS09330 -1.2 -2.5 baseplate assembly protein V compare
BWI76_RS12240 -1.2 -4.6 terminase small subunit compare
BWI76_RS14935 -1.2 -1.0 NIPSNAP family containing protein compare
BWI76_RS11430 -1.1 -0.8 lipoprotein compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in supernatant control experiments