Experiment set23IT024 for Klebsiella michiganensis M5al

Compare to:

Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS15660 +1.3 1.8 hypothetical protein compare
BWI76_RS04525 +1.2 2.4 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS11430 +1.2 1.7 lipoprotein compare
BWI76_RS18770 +1.2 1.7 DNA gyrase inhibitor compare
BWI76_RS16470 +1.1 2.4 transcriptional repressor NemR compare
BWI76_RS08645 +1.1 3.1 molybdate ABC transporter substrate-binding protein compare
BWI76_RS20360 +1.1 1.2 cell division protein DedD compare
BWI76_RS17805 +1.1 1.7 membrane protein compare
BWI76_RS11125 +1.0 2.0 metal-dependent hydrolase compare
BWI76_RS14075 +1.0 1.7 TetR family transcriptional regulator compare
BWI76_RS06910 +1.0 1.4 transcriptional regulator compare
BWI76_RS14320 +0.9 2.0 hypothetical protein compare
BWI76_RS16425 +0.9 1.3 hypothetical protein compare
BWI76_RS07820 +0.9 1.9 S-methyl-5-thioribose kinase compare
BWI76_RS10575 +0.9 1.9 polar amino acid ABC transporter permease compare
BWI76_RS11335 +0.9 1.4 tautomerase compare
BWI76_RS05075 +0.9 1.3 type II secretion system protein GspG compare
BWI76_RS21565 +0.9 1.1 outer membrane protein assembly factor BamE compare
BWI76_RS11840 +0.9 1.6 tryptophan synthase subunit alpha compare
BWI76_RS09110 +0.9 2.0 glutathione ABC transporter permease GsiD compare
BWI76_RS08110 +0.9 1.7 glutamate/aspartate ABC transporter substrate-binding protein compare
BWI76_RS17045 +0.8 1.5 hypothetical protein compare
BWI76_RS25285 +0.8 1.3 HPr family phosphocarrier protein compare
BWI76_RS16955 +0.8 1.2 hypothetical protein compare
BWI76_RS20150 +0.8 1.5 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS00075 +0.8 2.5 N-acetylmannosamine-6-phosphate 2-epimerase compare
BWI76_RS03045 +0.8 1.4 hypothetical protein compare
BWI76_RS19145 +0.8 1.9 formate dehydrogenase cytochrome b556 subunit compare
BWI76_RS07325 +0.8 2.0 aminoimidazole riboside kinase compare
BWI76_RS16210 +0.8 1.4 hypothetical protein compare
BWI76_RS11515 +0.8 0.9 peptide-methionine (R)-S-oxide reductase compare
BWI76_RS14415 +0.8 1.0 transcriptional regulator, TetR family protein compare
BWI76_RS11535 +0.8 2.4 putative oxidoreductase, Zn-dependent and NAD(P)-binding protein compare
BWI76_RS13160 +0.8 1.8 azoreductase compare
BWI76_RS23195 +0.7 2.2 ethanolamine utilization protein EutP compare
BWI76_RS12070 +0.7 1.1 hypothetical protein compare
BWI76_RS04710 +0.7 3.0 hypothetical protein compare
BWI76_RS08855 +0.7 2.5 endonuclease/exonuclease/phosphatase compare
BWI76_RS10435 +0.7 1.0 suppressor for copper-sensitivity C compare
BWI76_RS16555 +0.7 1.6 hypothetical protein compare
BWI76_RS15195 +0.7 1.8 DUF4186 domain-containing protein compare
BWI76_RS21235 +0.7 1.2 hypothetical protein compare
BWI76_RS22205 +0.7 2.7 cation ABC transporter ATP-binding protein compare
BWI76_RS12670 +0.7 1.7 DNA polymerase V subunit UmuD compare
BWI76_RS19480 +0.7 0.9 transcriptional regulator compare
BWI76_RS13380 +0.7 1.6 hypothetical protein compare
BWI76_RS10910 +0.7 2.1 hypothetical protein compare
BWI76_RS13545 +0.7 1.0 N-acetyltransferase compare
BWI76_RS14350 +0.7 2.8 hypothetical protein compare
BWI76_RS02050 +0.7 1.8 CidA/LrgA family protein compare
BWI76_RS06870 +0.7 1.8 aminoacyl-tRNA deacylase compare
BWI76_RS11010 +0.7 1.2 30S ribosomal protein S5 alanine N-acetyltransferase compare
BWI76_RS06810 +0.7 1.0 hypothetical protein compare
BWI76_RS24945 +0.7 1.1 glutamine amidotransferase compare
BWI76_RS15600 +0.7 1.7 hypothetical protein compare
BWI76_RS10900 +0.7 2.3 putative oxidoreductase compare
BWI76_RS11365 +0.7 1.5 iron ABC transporter compare
BWI76_RS02680 +0.7 1.4 EamA family transporter compare
BWI76_RS21115 +0.7 2.1 3-mercaptopyruvate sulfurtransferase compare
BWI76_RS09830 +0.6 1.5 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM compare
BWI76_RS21200 +0.6 3.1 aldose epimerase compare
BWI76_RS11810 +0.6 1.2 outer membrane protein OmpW compare
BWI76_RS19495 +0.6 0.9 ABC transporter, quaternary amine uptake transporter (QAT) family, ATP-binding protein compare
BWI76_RS26245 +0.6 1.3 transcriptional regulator compare
BWI76_RS00450 +0.6 2.8 formate dehydrogenase accessory protein FdhE compare
BWI76_RS08950 +0.6 3.3 Asp/Glu/hydantoin racemase compare
BWI76_RS15940 +0.6 1.8 DMSO reductase maturation protein DsmD compare
BWI76_RS13975 +0.6 1.8 urea carboxylase compare
BWI76_RS07075 +0.6 1.8 hypothetical protein compare
BWI76_RS17370 +0.6 0.8 nitrate transporter NasD compare
BWI76_RS17345 +0.6 1.9 nitrate/nitrite two-component system sensor histidine kinase NarX compare
BWI76_RS16760 +0.6 1.4 lipase compare
BWI76_RS06735 +0.6 1.3 50S ribosomal protein L31 compare
BWI76_RS11835 +0.6 1.0 putative regulatory protein MarR compare
BWI76_RS15350 +0.6 0.9 hypothetical protein compare
BWI76_RS11735 +0.6 1.1 PTS N,N'-diacetylchitobiose transporter subunit IIA compare
BWI76_RS27865 +0.6 3.0 hypothetical protein compare
BWI76_RS09275 +0.6 1.6 major capsid protein compare
BWI76_RS10645 +0.6 2.7 phytanoyl-CoA dioxygenase compare
BWI76_RS03705 +0.6 3.5 secretion protein compare
BWI76_RS22835 +0.6 1.9 MFS transporter compare
BWI76_RS11635 +0.6 1.2 ABC transporter compare
BWI76_RS12185 +0.6 1.7 hypothetical protein compare
BWI76_RS20900 +0.6 0.7 outer membrane protein assembly factor BamC compare
BWI76_RS12590 +0.6 1.3 helix-turn-helix-type transcriptional regulator compare
BWI76_RS13585 +0.6 1.6 4-oxalocrotonate tautomerase compare
BWI76_RS14020 +0.6 1.4 aspartate aminotransferase family protein compare
BWI76_RS25220 +0.6 1.4 outer membrane lipid asymmetry maintenance protein MlaD compare
BWI76_RS14325 +0.6 1.5 maturase compare
BWI76_RS07475 +0.6 0.7 DNA-binding transcriptional regulator RamA compare
BWI76_RS16455 +0.6 1.2 superoxide dismutase compare
BWI76_RS10750 +0.6 3.0 pyrimidine utilization transport protein G compare
BWI76_RS14835 +0.6 1.0 hypothetical protein compare
BWI76_RS08495 +0.6 2.4 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS02785 +0.6 1.8 AIG2 family protein compare
BWI76_RS15450 +0.6 2.0 hypothetical protein compare
BWI76_RS24920 +0.6 0.8 YraN family protein compare
BWI76_RS00720 +0.6 1.0 DNA-binding response regulator compare
BWI76_RS14665 +0.6 1.5 minor fimbrial subunit YfcQ compare
BWI76_RS20915 +0.6 2.8 peroxiredoxin compare
BWI76_RS05785 +0.5 2.0 CI repressor compare
BWI76_RS15165 +0.5 1.9 MBL fold metallo-hydrolase compare
BWI76_RS18735 +0.5 1.6 tautomerase family protein compare
BWI76_RS13370 +0.5 2.2 hypothetical protein compare
BWI76_RS13470 +0.5 1.3 transporter compare
BWI76_RS14965 +0.5 2.0 AraC family transcriptional regulator compare
BWI76_RS10570 +0.5 3.0 cysteine ABC transporter substrate-binding protein compare
BWI76_RS14305 +0.5 2.1 metallophosphoesterase compare
BWI76_RS11290 +0.5 2.8 MFS transporter compare
BWI76_RS22125 +0.5 0.7 membrane protein compare
BWI76_RS12660 +0.5 2.6 hypothetical protein compare
BWI76_RS12980 +0.5 2.3 AraC family transcriptional regulator compare
BWI76_RS19200 +0.5 2.2 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS05260 +0.5 1.1 chaperone compare
BWI76_RS12575 +0.5 2.0 FAD-dependent oxidoreductase compare
BWI76_RS22090 +0.5 1.0 transcriptional regulator compare
BWI76_RS01740 +0.5 2.9 PTS enzyme IIAB, mannose-specific compare
BWI76_RS01335 +0.5 2.6 DNase TatD compare
BWI76_RS07305 +0.5 1.6 sucrose operon repressor compare
BWI76_RS05515 +0.5 1.1 NADH:ubiquinone reductase (Na(+)-transporting) subunit F compare
BWI76_RS11630 +0.5 1.4 sulfurtransferase compare
BWI76_RS14390 +0.5 1.1 hypothetical protein compare
BWI76_RS12655 +0.5 2.6 PTS cellobiose transporter subunit IIB compare
BWI76_RS16510 +0.5 1.8 transcriptional repressor PurR compare
BWI76_RS00795 +0.5 1.2 carboxymuconolactone decarboxylase compare
BWI76_RS25485 +0.5 1.0 septum formation protein Maf compare
BWI76_RS12875 +0.5 1.6 bifunctional deaminase-reductase compare
BWI76_RS16920 +0.5 1.2 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS06175 +0.5 1.8 DUF188 domain-containing protein compare
BWI76_RS15760 +0.5 0.9 hypothetical protein compare
BWI76_RS25420 +0.5 2.7 malate dehydrogenase compare
BWI76_RS12735 +0.5 1.3 phage repressor protein compare
BWI76_RS22965 +0.5 1.3 cysteine sulfinate desulfinase compare
BWI76_RS18855 +0.5 1.5 cysteine desulfurase NifS compare
BWI76_RS15765 +0.5 1.2 hypothetical protein compare
BWI76_RS10445 +0.5 1.9 hypothetical protein compare
BWI76_RS15045 +0.5 1.8 LysR family transcriptional regulator compare
BWI76_RS20730 +0.5 0.9 hypothetical protein compare
BWI76_RS07225 +0.5 1.0 putative oxidoreductase compare
BWI76_RS26890 +0.5 0.6 hypothetical protein compare
BWI76_RS14570 +0.5 2.2 hypothetical protein compare
BWI76_RS16160 +0.5 1.4 LysR family transcriptional regulator compare
BWI76_RS10835 +0.5 0.8 hypothetical protein compare
BWI76_RS11895 +0.5 1.3 AraC family transcriptional regulator compare
BWI76_RS17350 +0.5 1.5 DNA-binding response regulator compare
BWI76_RS14135 +0.5 2.0 malto-oligosyltrehalose synthase compare
BWI76_RS26285 +0.5 1.1 glycerophosphodiester phosphodiesterase compare
BWI76_RS18385 +0.5 0.8 hypothetical protein compare
BWI76_RS19870 +0.5 1.1 malate:quinone oxidoreductase compare
BWI76_RS02090 +0.5 1.3 membrane protein compare
BWI76_RS21505 +0.5 0.8 hypothetical protein compare
BWI76_RS11445 +0.5 2.1 hypothetical protein compare
BWI76_RS15440 +0.5 1.7 hypothetical protein compare
BWI76_RS02200 +0.5 1.4 phosphonate C-P lyase system protein PhnL compare
BWI76_RS22375 +0.5 1.5 pectin acetylesterase compare
BWI76_RS20085 +0.5 1.5 GNAT family N-acetyltransferase compare
BWI76_RS11440 +0.5 0.7 hypothetical protein compare
BWI76_RS16195 +0.5 0.6 hypothetical protein compare
BWI76_RS21450 +0.5 0.7 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS20035 +0.5 1.3 hypothetical protein compare
BWI76_RS16785 +0.5 1.5 peptidase M20 compare
BWI76_RS16475 +0.5 1.7 alkene reductase compare
BWI76_RS08360 +0.5 1.1 LamB/YcsF family protein compare
BWI76_RS10320 +0.5 1.9 alpha-glucosidase/alpha-galactosidase compare
BWI76_RS01895 +0.5 1.2 cupin compare
BWI76_RS01385 +0.5 0.9 potassium transporter compare
BWI76_RS13185 +0.5 2.4 MFS transporter compare
BWI76_RS13220 +0.5 1.8 N-acetyltransferase compare
BWI76_RS06540 +0.5 1.2 DNA-binding protein HU-beta compare
BWI76_RS17690 +0.5 2.2 putative glycoporin compare
BWI76_RS11765 +0.5 1.6 bifunctional transporter/kinase compare
BWI76_RS14310 +0.5 1.9 hypothetical protein compare
BWI76_RS08405 +0.5 1.4 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS08905 +0.5 2.0 transketolase compare
BWI76_RS14245 +0.5 1.2 carboxymuconolactone decarboxylase family protein compare
BWI76_RS17080 +0.5 1.7 hypothetical protein compare
BWI76_RS25640 +0.5 1.8 hypothetical protein compare
BWI76_RS19450 +0.4 2.2 hypothetical protein compare
BWI76_RS18360 +0.4 1.0 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS15575 +0.4 2.6 hypothetical protein compare
BWI76_RS12600 +0.4 1.7 MFS transporter compare
BWI76_RS20695 +0.4 1.0 sulfate/thiosulfate transporter permease subunit compare
BWI76_RS05900 +0.4 2.0 phosphonate ABC transporter, permease protein PhnE compare
BWI76_RS26580 +0.4 2.2 universal stress protein A compare
BWI76_RS01560 +0.4 1.7 Rsd/AlgQ family anti-sigma factor compare
BWI76_RS26205 +0.4 1.4 glucose-1-phosphate adenylyltransferase compare
BWI76_RS18720 +0.4 1.8 MFS transporter compare
BWI76_RS17330 +0.4 1.9 nitrate reductase subunit beta compare
BWI76_RS14755 +0.4 0.8 SIS domain-containing protein compare
BWI76_RS21090 +0.4 2.4 cytoskeletal protein RodZ compare
BWI76_RS11770 +0.4 1.3 hypothetical protein compare
BWI76_RS12690 +0.4 2.2 LuxR family transcriptional regulator compare
BWI76_RS16240 +0.4 0.8 anti-adapter protein IraM compare
BWI76_RS18410 +0.4 1.1 drug/metabolite exporter YedA compare
BWI76_RS00330 +0.4 2.7 molybdenum cofactor guanylyltransferase compare
BWI76_RS18595 +0.4 1.9 hypothetical protein compare
BWI76_RS14025 +0.4 2.6 NMT1/THI5 like domain-containing protein compare
BWI76_RS08735 +0.4 2.2 Urocanate hydratase (EC 4.2.1.49) (from data) compare
BWI76_RS14830 +0.4 1.9 hypothetical protein compare
BWI76_RS14775 +0.4 0.5 creatinine amidohydrolase compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in supernatant control experiments

For supernatant control Vogels_fungal_media across organisms