Experiment set23IT022 for Klebsiella michiganensis M5al

Compare to:

Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB

200 most important genes:

  gene name fitness t score description  
BWI76_RS04465 -6.6 -7.6 carbamoyl-phosphate synthase small subunit compare
BWI76_RS15110 -5.3 -13.2 putative excinuclease ABC subunit A compare
BWI76_RS04470 -5.1 -8.7 carbamoyl phosphate synthase large subunit compare
BWI76_RS10990 -5.0 -5.8 dihydroorotase compare
BWI76_RS00965 -4.6 -1.7 acetolactate synthase 2 small subunit compare
BWI76_RS02995 -4.6 -11.0 aspartate carbamoyltransferase compare
BWI76_RS09645 -4.5 -2.9 thioredoxin-disulfide reductase compare
BWI76_RS26085 -4.2 -2.7 3-dehydroquinate synthase compare
BWI76_RS15115 -3.9 -3.8 MFS transporter compare
BWI76_RS05235 -3.8 -1.4 hypothetical protein compare
BWI76_RS09660 -3.5 -2.4 DNA translocase FtsK compare
BWI76_RS02580 -3.4 -2.5 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS20895 -3.4 -3.5 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS21310 -3.4 -1.8 DNA repair protein RecO compare
BWI76_RS01210 -3.3 -3.2 tyrosine recombinase XerC compare
BWI76_RS23265 -3.0 -6.6 hypothetical protein compare
BWI76_RS00400 -3.0 -1.8 glutamine synthetase compare
BWI76_RS09640 -2.9 -2.8 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS23240 -2.8 -2.7 exonuclease V subunit gamma compare
BWI76_RS21505 -2.8 -1.8 hypothetical protein compare
BWI76_RS04305 -2.8 -1.5 molecular chaperone DnaJ compare
BWI76_RS00180 -2.8 -1.4 F0F1 ATP synthase subunit epsilon compare
BWI76_RS26570 -2.8 -3.1 anion permease compare
BWI76_RS18770 -2.6 -1.4 DNA gyrase inhibitor compare
BWI76_RS20970 -2.6 -1.9 phosphoribosylglycinamide formyltransferase compare
BWI76_RS00600 -2.5 -8.2 LacI family transcriptional regulator compare
BWI76_RS09910 -2.5 -14.0 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS23230 -2.5 -1.7 exodeoxyribonuclease V subunit beta compare
BWI76_RS01615 -2.4 -8.9 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS11965 -2.4 -3.8 orotidine-5'-phosphate decarboxylase compare
BWI76_RS27390 -2.3 -5.6 ribonuclease PH compare
BWI76_RS05450 -2.3 -1.6 ribonuclease HI compare
BWI76_RS07725 -2.3 -1.5 iron-enterobactin transporter permease compare
BWI76_RS21140 -2.3 -2.0 molecular chaperone HscA compare
BWI76_RS01350 -2.3 -1.4 NAD(P)H-flavin reductase compare
BWI76_RS01610 -2.2 -7.4 phosphoribosylamine--glycine ligase compare
BWI76_RS27385 -2.2 -5.8 orotate phosphoribosyltransferase compare
BWI76_RS15835 -2.2 -1.5 hypothetical protein compare
BWI76_RS08275 -2.1 -1.5 LexA regulated protein compare
BWI76_RS20350 -2.1 -3.9 amidophosphoribosyltransferase compare
BWI76_RS07070 -2.0 -3.5 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS20650 -2.0 -2.3 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS16965 -1.9 -4.3 murein lipoprotein compare
BWI76_RS26410 -1.9 -2.4 membrane protein compare
BWI76_RS15225 -1.9 -2.2 DeoR family transcriptional regulator compare
BWI76_RS19010 -1.9 -3.1 polysaccharide pyruvyl transferase yvff compare
BWI76_RS26775 -1.9 -5.9 endo-1,4-D-glucanase compare
BWI76_RS23895 -1.9 -2.0 Xaa-Pro aminopeptidase compare
BWI76_RS21265 -1.8 -7.5 phosphoribosylformylglycinamidine synthase compare
BWI76_RS24575 -1.8 -1.9 hypothetical protein compare
BWI76_RS17975 -1.8 -4.4 tail-specific protease compare
BWI76_RS20355 -1.8 -2.9 colicin V production protein compare
BWI76_RS04510 -1.8 -1.8 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS25480 -1.8 -2.6 ribonuclease E/G compare
BWI76_RS09520 -1.8 -2.0 arginine ABC transporter ATP-binding protein ArtP compare
BWI76_RS07065 -1.8 -4.1 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS15830 -1.8 -2.5 hypothetical protein compare
BWI76_RS20995 -1.7 -3.9 RNA degradosome polyphosphate kinase compare
BWI76_RS15850 -1.7 -1.2 DUF1317 domain-containing protein compare
BWI76_RS15840 -1.7 -3.2 prophage protein compare
BWI76_RS01000 -1.7 -2.7 peptidyl-prolyl cis-trans isomerase compare
BWI76_RS21350 -1.7 -3.1 anti-RNA polymerase sigma factor SigE compare
BWI76_RS16000 -1.7 -1.5 multidrug transporter subunit MdtI compare
BWI76_RS23885 -1.6 -1.3 2-octaprenylphenol hydroxylase compare
BWI76_RS13595 -1.6 -3.6 transcriptional regulator compare
BWI76_RS15605 -1.6 -2.3 hypothetical protein compare
BWI76_RS21340 -1.5 -2.0 SoxR reducing system protein RseC compare
BWI76_RS21235 -1.5 -1.4 hypothetical protein compare
BWI76_RS21450 -1.5 -1.5 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS01220 -1.5 -6.0 DNA-dependent helicase II compare
BWI76_RS08210 -1.5 -2.1 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS17980 -1.5 -2.9 RNA chaperone ProQ compare
BWI76_RS09190 -1.4 -2.9 hypothetical protein compare
BWI76_RS08520 -1.4 -1.7 colicin transporter TolQ compare
BWI76_RS20160 -1.4 -2.1 NADH-quinone oxidoreductase subunit H compare
BWI76_RS10530 -1.4 -2.2 GntR family transcriptional regulator with compare
BWI76_RS05260 -1.4 -1.5 chaperone compare
BWI76_RS06015 -1.4 -1.3 hypothetical protein compare
BWI76_RS08530 -1.4 -2.2 protein TolA compare
BWI76_RS15825 -1.4 -3.9 hypothetical protein compare
BWI76_RS25335 -1.4 -1.9 stringent starvation protein A compare
BWI76_RS04515 -1.4 -1.2 Co2+/Mg2+ efflux protein ApaG compare
BWI76_RS08385 -1.3 -2.7 citrate (Si)-synthase compare
BWI76_RS22955 -1.3 -3.3 transcriptional regulator GcvA compare
BWI76_RS21475 -1.3 -3.1 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS22095 -1.3 -2.1 multidrug export protein EmrA compare
BWI76_RS12090 -1.3 -1.4 HNH endonuclease compare
BWI76_RS10935 -1.3 -3.6 glucan biosynthesis glucosyltransferase H compare
BWI76_RS14415 -1.3 -2.2 transcriptional regulator, TetR family protein compare
BWI76_RS16805 -1.3 -1.7 basic amino acid ABC transporter substrate-binding protein compare
BWI76_RS07645 -1.3 -1.9 short-chain dehydrogenase/reductase compare
BWI76_RS16525 -1.2 -2.8 cyclopropane-fatty-acyl-phospholipid synthase compare
BWI76_RS19845 -1.2 -5.0 phosphatase compare
BWI76_RS01800 -1.2 -2.5 glucose-6-phosphate isomerase compare
BWI76_RS04530 -1.2 -1.4 peptidylprolyl isomerase SurA compare
BWI76_RS17110 -1.2 -1.5 vitamin B12 ABC transporter permease BtuC compare
BWI76_RS15990 -1.2 -3.6 serine protease compare
BWI76_RS00345 -1.2 -2.2 protein disulfide oxidoreductase DsbA compare
BWI76_RS01115 -1.2 -1.9 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS08525 -1.2 -1.5 colicin transporter compare
BWI76_RS09760 -1.2 -2.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS22755 -1.1 -3.7 phosphoadenosine phosphosulfate reductase compare
BWI76_RS16515 -1.1 -1.3 LysR family transcriptional regulator compare
BWI76_RS08720 -1.1 -2.1 imidazolonepropionase compare
BWI76_RS13400 -1.1 -2.5 GntR family transcriptional regulator compare
BWI76_RS26200 -1.1 -5.1 starch synthase compare
BWI76_RS06830 -1.1 -2.8 recombination protein RecR compare
BWI76_RS04645 -1.1 -2.7 3-dehydroquinase compare
BWI76_RS26590 -1.1 -1.7 transcriptional regulator compare
BWI76_RS08500 -1.1 -1.8 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS03595 -1.1 -1.1 ethanolamine utilization protein EutM compare
BWI76_RS13915 -1.1 -4.9 magnesium transport protein MgtC compare
BWI76_RS04895 -1.1 -1.4 hypothetical protein compare
BWI76_RS13600 -1.1 -1.6 hypothetical protein compare
BWI76_RS09825 -1.1 -6.1 envelope biogenesis factor ElyC compare
BWI76_RS08040 -1.1 -2.0 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
BWI76_RS22935 -1.0 -1.5 L-fucose mutarotase compare
BWI76_RS22765 -1.0 -5.9 sulfite reductase subunit alpha compare
BWI76_RS21075 -1.0 -1.3 membrane protein compare
BWI76_RS05200 -1.0 -1.5 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS21580 -1.0 -1.2 SsrA-binding protein compare
BWI76_RS06190 -1.0 -1.3 hypothetical protein compare
BWI76_RS03605 -1.0 -2.0 BMC domain-containing protein compare
BWI76_RS16470 -1.0 -1.2 transcriptional repressor NemR compare
BWI76_RS13215 -1.0 -1.2 type I glyceraldehyde-3-phosphate dehydrogenase compare
BWI76_RS20165 -1.0 -2.7 NADH-quinone oxidoreductase subunit G compare
BWI76_RS17720 -1.0 -1.0 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS07780 -1.0 -1.0 hypothetical protein compare
BWI76_RS16935 -1.0 -1.1 shikimate dehydrogenase compare
BWI76_RS20140 -1.0 -3.6 NADH-quinone oxidoreductase subunit L compare
BWI76_RS05950 -1.0 -1.3 polar amino acid ABC transporter inner membrane subunit compare
BWI76_RS05835 -1.0 -2.4 gamma-glutamyl-phosphate reductase compare
BWI76_RS04705 -1.0 -3.3 DNA-binding transcriptional regulator FruR compare
BWI76_RS23015 -1.0 -1.2 cobalt transporter ATP-binding subunit compare
BWI76_RS20230 -1.0 -1.2 hypothetical protein compare
BWI76_RS24100 -0.9 -2.0 YggS family pyridoxal phosphate enzyme compare
BWI76_RS19690 -0.9 -1.9 LysR family transcriptional regulator compare
BWI76_RS10930 -0.9 -5.6 glucan biosynthesis protein G compare
BWI76_RS18410 -0.9 -3.0 drug/metabolite exporter YedA compare
BWI76_RS11700 -0.9 -1.1 hypothetical protein compare
BWI76_RS04605 -0.9 -1.2 thiamine ABC transporter ATP-binding protein compare
BWI76_RS15795 -0.9 -1.7 bacteriophage CII family protein compare
BWI76_RS05075 -0.9 -0.8 type II secretion system protein GspG compare
BWI76_RS11370 -0.9 -1.7 iron-dicitrate transporter subunit FecD compare
BWI76_RS16090 -0.9 -1.5 two-component system response regulator DcuR compare
BWI76_RS23480 -0.9 -4.4 EAL domain-containing protein compare
BWI76_RS22690 -0.9 -1.6 adenylyl-sulfate kinase compare
BWI76_RS17920 -0.9 -1.2 23S rRNA (guanine(745)-N(1))-methyltransferase compare
BWI76_RS19375 -0.9 -1.6 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS25080 -0.9 -2.7 tRNA pseudouridine(55) synthase compare
BWI76_RS18815 -0.9 -1.6 nitrogenase molybdenum-iron protein alpha chain compare
BWI76_RS22645 -0.9 -1.9 RNA polymerase sigma factor RpoS compare
BWI76_RS27440 -0.9 -2.3 DNA helicase RecG compare
BWI76_RS12225 -0.9 -2.7 hypothetical protein compare
BWI76_RS27165 -0.9 -2.2 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS23820 -0.9 -2.0 flavodoxin FldB compare
BWI76_RS00710 -0.8 -1.4 6-N-hydroxylaminopurine resistance protein compare
BWI76_RS13250 -0.8 -0.9 cytochrome b561 compare
BWI76_RS13970 -0.8 -1.4 ABC transporter compare
BWI76_RS07820 -0.8 -1.4 S-methyl-5-thioribose kinase compare
BWI76_RS00750 -0.8 -2.0 ATP-dependent protease ATP-binding subunit HslU compare
BWI76_RS04160 -0.8 -2.8 phosphoserine phosphatase compare
BWI76_RS27425 -0.8 -1.5 DNA-directed RNA polymerase subunit omega compare
BWI76_RS09755 -0.8 -3.0 phosphoserine transaminase compare
BWI76_RS21070 -0.8 -1.1 outer membrane protein assembly factor BamB compare
BWI76_RS10450 -0.8 -2.6 tRNA-Tyr compare
BWI76_RS01205 -0.8 -2.1 DUF484 family protein compare
BWI76_RS20460 -0.8 -2.6 acetyl-CoA C-acyltransferase FadI compare
BWI76_RS08750 -0.8 -0.9 kinase inhibitor compare
BWI76_RS12545 -0.8 -2.3 hypothetical protein compare
BWI76_RS15215 -0.8 -0.7 N-acetyltransferase compare
BWI76_RS24965 -0.8 -1.5 SCP2 domain-containing protein compare
BWI76_RS17735 -0.8 -2.5 D-amino acid dehydrogenase small subunit compare
BWI76_RS11515 -0.8 -0.8 peptide-methionine (R)-S-oxide reductase compare
BWI76_RS23255 -0.8 -2.8 prepilin-type cleavage/methylation domain-containing protein compare
BWI76_RS11170 -0.8 -1.0 hypothetical protein compare
BWI76_RS12585 -0.8 -1.5 transcriptional regulator compare
BWI76_RS16400 -0.8 -1.7 pyridoxal kinase compare
BWI76_RS06525 -0.8 -1.9 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS19580 -0.8 -2.5 FAA-hydrolase compare
BWI76_RS18550 -0.8 -1.2 tRNA-Asn compare
BWI76_RS26405 -0.8 -1.0 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS12345 -0.8 -2.5 nitrite transporter compare
BWI76_RS18000 -0.8 -1.2 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF compare
BWI76_RS04970 -0.8 -3.0 ABC transporter permease compare
BWI76_RS12495 -0.7 -1.0 2-Cys peroxiredoxin compare
BWI76_RS01085 -0.7 -3.2 polysaccharide chain length modulation protein compare
BWI76_RS24240 -0.7 -1.3 hypothetical protein compare
BWI76_RS24025 -0.7 -3.4 agmatinase compare
BWI76_RS20180 -0.7 -2.3 NADH-quinone oxidoreductase subunit C/D compare
BWI76_RS19325 -0.7 -0.8 mandelate racemase compare
BWI76_RS05880 -0.7 -0.9 AraC-type DNA-binding domain-containing protein compare
BWI76_RS16025 -0.7 -1.0 triphosphoribosyl-dephospho-CoA synthase compare
BWI76_RS19935 -0.7 -1.2 hypothetical protein compare
BWI76_RS20435 -0.7 -0.7 chorismate synthase compare
BWI76_RS09460 -0.7 -1.8 spermidine/putrescine ABC transporter substrate-binding protein PotF compare
BWI76_RS00415 -0.7 -1.8 glucose-1-phosphatase compare
BWI76_RS00390 -0.7 -3.9 two-component system sensor histidine kinase NtrB compare
BWI76_RS17065 -0.7 -4.4 phosphoenolpyruvate synthase compare
BWI76_RS03020 -0.7 -1.6 tRNA hydroxylase compare


Specific Phenotypes

For 1 genes in this experiment

For supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered across organisms