Experiment set23IT021 for Klebsiella michiganensis M5al

Compare to:

Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS14075 +1.6 3.2 TetR family transcriptional regulator compare
BWI76_RS21565 +1.5 2.3 outer membrane protein assembly factor BamE compare
BWI76_RS05235 +1.4 2.0 hypothetical protein compare
BWI76_RS18770 +1.3 2.1 DNA gyrase inhibitor compare
BWI76_RS08645 +1.2 4.5 molybdate ABC transporter substrate-binding protein compare
BWI76_RS14320 +1.1 2.5 hypothetical protein compare
BWI76_RS21070 +1.1 1.8 outer membrane protein assembly factor BamB compare
BWI76_RS16195 +1.1 2.3 hypothetical protein compare
BWI76_RS20150 +1.1 1.5 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS20360 +1.0 1.2 cell division protein DedD compare
BWI76_RS23520 +1.0 2.4 hypothetical protein compare
BWI76_RS04525 +1.0 2.2 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS13545 +1.0 1.6 N-acetyltransferase compare
BWI76_RS17330 +0.9 2.3 nitrate reductase subunit beta compare
BWI76_RS23340 +0.9 3.1 transcriptional regulator compare
BWI76_RS26245 +0.9 3.6 transcriptional regulator compare
BWI76_RS06680 +0.9 1.5 hypothetical protein compare
BWI76_RS10770 +0.9 1.8 pyrimidine utilization protein C compare
BWI76_RS25285 +0.9 1.4 HPr family phosphocarrier protein compare
BWI76_RS11300 +0.8 1.4 cupin compare
BWI76_RS10745 +0.8 1.2 hypothetical protein compare
BWI76_RS16000 +0.8 1.6 multidrug transporter subunit MdtI compare
BWI76_RS20750 +0.8 1.3 carboxysome structural protein EutK compare
BWI76_RS15435 +0.8 1.6 hypothetical protein compare
BWI76_RS12735 +0.8 3.5 phage repressor protein compare
BWI76_RS14835 +0.8 1.7 hypothetical protein compare
BWI76_RS01630 +0.8 0.8 16S ribosomal RNA compare
BWI76_RS25485 +0.8 1.7 septum formation protein Maf compare
BWI76_RS24110 +0.8 2.3 YggU family protein compare
BWI76_RS17350 +0.8 3.0 DNA-binding response regulator compare
BWI76_RS16470 +0.8 1.6 transcriptional repressor NemR compare
BWI76_RS18360 +0.8 1.0 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS11810 +0.7 2.0 outer membrane protein OmpW compare
BWI76_RS11430 +0.7 1.1 lipoprotein compare
BWI76_RS18070 +0.7 1.2 DNA polymerase III subunit epsilon compare
BWI76_RS11865 +0.7 2.9 phosphatase compare
BWI76_RS15735 +0.7 1.4 hypothetical protein compare
BWI76_RS00720 +0.7 2.1 DNA-binding response regulator compare
BWI76_RS24080 +0.7 0.8 DUF179 domain-containing protein compare
BWI76_RS07325 +0.7 2.6 aminoimidazole riboside kinase compare
BWI76_RS20230 +0.7 1.5 hypothetical protein compare
BWI76_RS11260 +0.7 1.8 hypothetical protein compare
BWI76_RS14770 +0.7 1.2 PTS IIA 2 domain protein compare
BWI76_RS04710 +0.7 3.2 hypothetical protein compare
BWI76_RS16500 +0.7 2.4 superoxide dismutase [Fe] compare
BWI76_RS27460 +0.6 1.9 hypothetical protein compare
BWI76_RS14170 +0.6 1.7 hypothetical protein compare
BWI76_RS18610 +0.6 2.1 transcriptional regulator LysR compare
BWI76_RS13645 +0.6 2.2 N-hydroxyarylamine O-acetyltransferase compare
BWI76_RS12465 +0.6 1.1 phage shock protein D compare
BWI76_RS16760 +0.6 2.6 lipase compare
BWI76_RS06910 +0.6 0.9 transcriptional regulator compare
BWI76_RS11655 +0.6 2.2 TVP38/TMEM64 family protein compare
BWI76_RS02895 +0.6 2.7 hypothetical protein compare
BWI76_RS18135 +0.6 1.5 zinc ABC transporter ATP-binding protein ZnuC compare
BWI76_RS16895 +0.6 1.4 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS13685 +0.6 1.6 IclR family transcriptional regulator compare
BWI76_RS21395 +0.6 1.2 DTW domain-containing protein compare
BWI76_RS11240 +0.6 3.3 spermidine/putrescine ABC transporter substrate-binding protein PotD compare
BWI76_RS09530 +0.6 0.8 hypothetical protein compare
BWI76_RS13755 +0.6 1.2 hypothetical protein compare
BWI76_RS16210 +0.6 1.2 hypothetical protein compare
BWI76_RS11110 +0.6 1.9 cell division protein YceG compare
BWI76_RS09110 +0.6 1.9 glutathione ABC transporter permease GsiD compare
BWI76_RS08825 +0.6 1.7 cyclic pyranopterin monophosphate synthase MoaC compare
BWI76_RS16315 +0.6 1.2 SirA-like protein compare
BWI76_RS01620 +0.6 1.4 hypothetical protein compare
BWI76_RS07925 +0.6 2.3 hypothetical protein compare
BWI76_RS07595 +0.6 1.5 putative oxidoreductase compare
BWI76_RS20605 +0.5 2.4 purine-nucleoside phosphorylase compare
BWI76_RS13470 +0.5 1.5 transporter compare
BWI76_RS00795 +0.5 1.4 carboxymuconolactone decarboxylase compare
BWI76_RS18855 +0.5 1.4 cysteine desulfurase NifS compare
BWI76_RS16230 +0.5 1.8 dihydromonapterin reductase compare
BWI76_RS08620 +0.5 1.8 galactose-1-phosphate uridylyltransferase compare
BWI76_RS06670 +0.5 2.1 hypothetical protein compare
BWI76_RS05025 +0.5 0.8 2'-5' RNA ligase compare
BWI76_RS10330 +0.5 1.3 TetR family transcriptional regulator compare
BWI76_RS15215 +0.5 0.7 N-acetyltransferase compare
BWI76_RS04770 +0.5 1.7 D-alanine--D-alanine ligase compare
BWI76_RS16275 +0.5 1.0 fumarate hydratase FumA compare
BWI76_RS11525 +0.5 1.1 HNH endonuclease compare
BWI76_RS09515 +0.5 1.8 arginine ABC transporter substrate-binding protein compare
BWI76_RS16445 +0.5 1.3 auxiliary transporter membrane fusion protein compare
BWI76_RS22860 +0.5 2.6 SecY-interacting protein compare
BWI76_RS16015 +0.5 1.5 pheromone autoinducer 2 transporter compare
BWI76_RS20035 +0.5 1.5 hypothetical protein compare
BWI76_RS09505 +0.5 2.7 arginine transporter permease subunit ArtM compare
BWI76_RS06475 +0.5 1.1 protoheme IX farnesyltransferase compare
BWI76_RS09805 +0.5 1.8 hypothetical protein compare
BWI76_RS15220 +0.5 2.5 L-lactate dehydrogenase compare
BWI76_RS03170 +0.5 1.6 hypothetical protein compare
BWI76_RS10255 +0.5 1.3 dihydrodipicolinate synthase family protein compare
BWI76_RS11535 +0.5 1.9 putative oxidoreductase, Zn-dependent and NAD(P)-binding protein compare
BWI76_RS08835 +0.5 2.3 molybdopterin guanine dinucleotide biosynthesis protein MoaE compare
BWI76_RS12780 +0.5 0.8 hypothetical protein compare
BWI76_RS17850 +0.5 1.9 alginate lyase compare
BWI76_RS14775 +0.5 1.1 creatinine amidohydrolase compare
BWI76_RS09150 +0.5 2.0 DNA-binding transcriptional repressor DeoR compare
BWI76_RS25300 +0.5 0.9 hybrid sensor histidine kinase/response regulator compare
BWI76_RS26045 +0.5 1.7 nitrite reductase small subunit compare
BWI76_RS16655 +0.5 1.3 CatA-like O-acetyltransferase compare
BWI76_RS08970 +0.5 1.5 glutamine ABC transporter permease GlnP compare
BWI76_RS24280 +0.5 1.8 biopolymer transporter ExbB compare
BWI76_RS04975 +0.5 1.8 PTS fructose subfamily transporter subunit IIA compare
BWI76_RS26130 +0.5 1.8 ADP compounds hydrolase NudE compare
BWI76_RS14090 +0.5 1.7 polyketide cyclase compare
BWI76_RS16170 +0.5 2.0 amidohydrolase compare
BWI76_RS12605 +0.5 1.3 hypothetical protein compare
BWI76_RS26960 +0.5 2.2 bifunctional glyoxylate/hydroxypyruvate reductase B compare
BWI76_RS08110 +0.5 1.0 glutamate/aspartate ABC transporter substrate-binding protein compare
BWI76_RS10290 +0.5 1.9 transcriptional regulator compare
BWI76_RS11735 +0.5 1.8 PTS N,N'-diacetylchitobiose transporter subunit IIA compare
BWI76_RS19870 +0.5 1.2 malate:quinone oxidoreductase compare
BWI76_RS26910 +0.5 1.8 hypothetical protein compare
BWI76_RS20610 +0.4 1.2 LysR family transcriptional regulator compare
BWI76_RS06745 +0.4 1.5 N-acetyltransferase GCN5 compare
BWI76_RS17530 +0.4 1.4 hypothetical protein compare
BWI76_RS15150 +0.4 1.1 outer membrane efflux protein compare
BWI76_RS09080 +0.4 1.4 molybdopterin-synthase adenylyltransferase MoeB compare
BWI76_RS07460 +0.4 1.4 hypothetical protein compare
BWI76_RS17830 +0.4 2.2 ABC transporter ATP-binding protein compare
BWI76_RS09275 +0.4 1.1 major capsid protein compare
BWI76_RS26970 +0.4 2.6 aromatic acid/H+ symport family MFS transporter compare
BWI76_RS13355 +0.4 1.5 AraC family transcriptional regulator compare
BWI76_RS12870 +0.4 1.1 putative phytanoyl-CoA dioxygenase compare
BWI76_RS12980 +0.4 1.7 AraC family transcriptional regulator compare
BWI76_RS07225 +0.4 1.2 putative oxidoreductase compare
BWI76_RS19710 +0.4 1.4 NupC/NupG family nucleoside CNT transporter compare
BWI76_RS05860 +0.4 1.4 alkanesulfonates-binding protein compare
BWI76_RS12770 +0.4 2.3 hypothetical protein compare
BWI76_RS06800 +0.4 0.7 DUF2496 domain-containing protein compare
BWI76_RS00430 +0.4 1.3 GNAT family N-acetyltransferase compare
BWI76_RS21285 +0.4 1.0 HAD family hydrolase compare
BWI76_RS14330 +0.4 1.9 IS3 family transposase compare
BWI76_RS16215 +0.4 2.4 hypothetical protein compare
BWI76_RS07385 +0.4 1.4 short-chain dehydrogenase/reductase SDR compare
BWI76_RS17320 +0.4 2.5 respiratory nitrate reductase subunit gamma compare
BWI76_RS16675 +0.4 1.0 ABC transporter compare
BWI76_RS13820 +0.4 0.6 hypothetical protein compare
BWI76_RS12715 +0.4 1.6 universal stress protein F compare
BWI76_RS03310 +0.4 1.8 AraC family transcriptional regulator compare
BWI76_RS26580 +0.4 1.9 universal stress protein A compare
BWI76_RS20560 +0.4 0.6 hypothetical protein compare
BWI76_RS10750 +0.4 1.5 pyrimidine utilization transport protein G compare
BWI76_RS19320 +0.4 1.3 putative ABC transport system periplasmic binding protein compare
BWI76_RS18125 +0.4 1.4 murein DD-endopeptidase MepM compare
BWI76_RS18540 +0.4 1.8 signal transduction protein PmrD compare
BWI76_RS11440 +0.4 0.6 hypothetical protein compare
BWI76_RS21470 +0.4 0.9 gluconolaconase compare
BWI76_RS05335 +0.4 0.9 copper homeostasis/adhesion lipoprotein NlpE compare
BWI76_RS15360 +0.4 1.1 hypothetical protein compare
BWI76_RS13480 +0.4 0.8 XRE family transcriptional regulator compare
BWI76_RS17355 +0.4 1.5 YchO family inverse autotransporter domain-containing protein compare
BWI76_RS20280 +0.4 1.4 phosphodiesterase compare
BWI76_RS12695 +0.4 1.7 zinc transporter ZntB compare
BWI76_RS15665 +0.4 1.3 hypothetical protein compare
BWI76_RS09085 +0.4 2.0 molybdopterin molybdenumtransferase MoeA compare
BWI76_RS24245 +0.4 2.1 bifunctional glutathionylspermidine amidase/glutathionylspermidine synthase compare
BWI76_RS23580 +0.4 1.2 hypothetical protein compare
BWI76_RS22470 +0.4 1.2 transporter permease compare
BWI76_RS19760 +0.4 1.5 GTP-binding protein compare
BWI76_RS23970 +0.4 1.3 mechanosensitive ion channel protein MscS compare
BWI76_RS12600 +0.4 1.6 MFS transporter compare
BWI76_RS17370 +0.4 0.9 nitrate transporter NasD compare
BWI76_RS17335 +0.4 2.6 nitrate reductase subunit alpha compare
BWI76_RS14040 +0.4 1.5 thiaminase compare
BWI76_RS08885 +0.4 0.6 transcriptional regulator compare
BWI76_RS09105 +0.4 1.8 glutathione ABC transporter permease GsiC compare
BWI76_RS11195 +0.4 1.4 multiple stress resistance protein BhsA compare
BWI76_RS18620 +0.4 2.1 L,D-transpeptidase compare
BWI76_RS11840 +0.4 0.6 tryptophan synthase subunit alpha compare
BWI76_RS15235 +0.4 1.5 hypothetical protein compare
BWI76_RS08855 +0.4 1.5 endonuclease/exonuclease/phosphatase compare
BWI76_RS15315 +0.4 1.0 DNA-binding protein compare
BWI76_RS15260 +0.4 0.8 hypothetical protein compare
BWI76_RS21255 +0.4 1.8 hypothetical protein compare
BWI76_RS08335 +0.4 1.2 deoxyribodipyrimidine photo-lyase compare
BWI76_RS25470 +0.4 2.1 metalloprotease TldD compare
BWI76_RS21695 +0.4 1.8 glycosyl transferase family protein compare
BWI76_RS22410 +0.4 1.3 PTS lactose/cellobiose transporter subunit IIA compare
BWI76_RS20640 +0.4 1.1 cysteine synthase A compare
BWI76_RS26440 +0.4 0.7 hypothetical protein compare
BWI76_RS20320 +0.4 1.7 histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein HisP compare
BWI76_RS16555 +0.4 1.3 hypothetical protein compare
BWI76_RS10490 +0.4 1.7 vanillate O-demethylase oxygenase subunit compare
BWI76_RS22130 +0.4 1.0 fructose-1-phosphate/6-phosphogluconate phosphatase compare
BWI76_RS02275 +0.4 1.8 TetR family transcriptional regulator compare
BWI76_RS14235 +0.4 1.9 alcohol dehydrogenase compare
BWI76_RS19980 +0.4 1.1 2-keto-3-deoxy-L-rhamnonate aldolase compare
BWI76_RS20675 +0.4 1.6 GMP synthase compare
BWI76_RS15255 +0.4 1.9 hypothetical protein compare
BWI76_RS19000 +0.4 1.7 acyltransferase compare
BWI76_RS22020 +0.4 1.4 L-alanine exporter AlaE compare
BWI76_RS03610 +0.4 1.5 hypothetical protein compare
BWI76_RS17210 +0.4 1.4 dsDNA-mimic protein compare
BWI76_RS21500 +0.4 1.6 membrane protein compare
BWI76_RS05955 +0.4 1.8 ABC transporter compare
BWI76_RS09165 +0.4 1.6 phosphatase YbjI compare
BWI76_RS15985 +0.4 1.3 LysR family transcriptional regulator compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in supernatant experiments

For supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered across organisms