Experiment set23IT016 for Klebsiella michiganensis M5al

Compare to:

Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

200 most important genes:

  gene name fitness t score description  
BWI76_RS04470 -10.7 -7.4 carbamoyl phosphate synthase large subunit compare
BWI76_RS04465 -10.3 -7.1 carbamoyl-phosphate synthase small subunit compare
BWI76_RS02995 -8.8 -11.3 aspartate carbamoyltransferase compare
BWI76_RS11965 -8.4 -5.5 orotidine-5'-phosphate decarboxylase compare
BWI76_RS18950 -8.2 -5.1 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS20355 -7.8 -4.5 colicin V production protein compare
BWI76_RS01210 -7.6 -4.2 tyrosine recombinase XerC compare
BWI76_RS10990 -7.4 -3.6 dihydroorotase compare
BWI76_RS27385 -7.4 -7.2 orotate phosphoribosyltransferase compare
BWI76_RS20965 -7.2 -3.9 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS09645 -7.0 -2.3 thioredoxin-disulfide reductase compare
BWI76_RS23220 -7.0 -8.3 amino-acid N-acetyltransferase compare
BWI76_RS11855 -7.0 -7.4 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS01615 -6.9 -4.8 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS09910 -6.9 -20.1 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS25115 -6.9 -8.2 argininosuccinate synthase compare
BWI76_RS05015 -6.7 -4.4 transcriptional regulator compare
BWI76_RS18935 -6.6 -4.9 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS00805 -6.5 -5.9 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS05835 -6.4 -4.1 gamma-glutamyl-phosphate reductase compare
BWI76_RS00850 -6.3 -7.8 acetylglutamate kinase compare
BWI76_RS23360 -6.3 -4.0 diaminopimelate decarboxylase compare
BWI76_RS21265 -6.2 -12.7 phosphoribosylformylglycinamidine synthase compare
BWI76_RS03010 -6.1 -11.0 ornithine carbamoyltransferase compare
BWI76_RS21475 -5.8 -5.9 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS18955 -5.8 -5.0 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS24285 -5.7 -7.8 cystathionine beta-lyase compare
BWI76_RS04250 -5.7 -8.1 homoserine kinase compare
BWI76_RS04685 -5.7 -11.5 putative leucine operon leader peptide compare
BWI76_RS23265 -5.7 -5.1 hypothetical protein compare
BWI76_RS18930 -5.6 -5.3 histidinol-phosphate transaminase compare
BWI76_RS07065 -5.6 -7.3 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS25315 -5.3 -10.5 glutamate synthase large subunit compare
BWI76_RS00990 -5.3 -9.0 ketol-acid reductoisomerase compare
BWI76_RS09655 -5.2 -5.6 leucine-responsive regulatory protein compare
BWI76_RS04255 -5.1 -9.3 threonine synthase compare
BWI76_RS04510 -5.1 -2.8 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS07070 -5.1 -4.9 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS20350 -5.1 -4.6 amidophosphoribosyltransferase compare
BWI76_RS20390 -5.0 -2.8 erythronate-4-phosphate dehydrogenase compare
BWI76_RS00855 -5.0 -9.5 argininosuccinate lyase compare
BWI76_RS26620 -4.9 -1.6 Fe-S biogenesis protein NfuA compare
BWI76_RS00965 -4.9 -1.6 acetolactate synthase 2 small subunit compare
BWI76_RS23920 -4.8 -5.2 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS04645 -4.8 -5.7 3-dehydroquinase compare
BWI76_RS04845 -4.8 -5.7 nicotinate-nucleotide pyrophosphorylase compare
BWI76_RS04305 -4.8 -1.6 molecular chaperone DnaJ compare
BWI76_RS04525 -4.7 -2.7 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS04670 -4.7 -6.8 3-isopropylmalate dehydratase large subunit compare
BWI76_RS15110 -4.7 -15.5 putative excinuclease ABC subunit A compare
BWI76_RS25320 -4.7 -8.5 glutamate synthase compare
BWI76_RS04665 -4.6 -19.0 3-isopropylmalate dehydratase small subunit compare
BWI76_RS01655 -4.6 -6.7 homoserine O-succinyltransferase compare
BWI76_RS05840 -4.6 -3.6 glutamate 5-kinase compare
BWI76_RS18925 -4.6 -3.9 histidinol dehydrogenase compare
BWI76_RS00980 -4.6 -10.6 PLP-dependent threonine dehydratase compare
BWI76_RS04675 -4.6 -5.4 3-isopropylmalate dehydrogenase compare
BWI76_RS01275 -4.5 -8.4 LysR family transcriptional regulator compare
BWI76_RS11845 -4.5 -1.6 tryptophan synthase subunit beta compare
BWI76_RS17980 -4.5 -5.9 RNA chaperone ProQ compare
BWI76_RS09755 -4.5 -5.9 phosphoserine transaminase compare
BWI76_RS19375 -4.4 -2.7 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS18940 -4.4 -5.1 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS00960 -4.4 -6.1 acetolactate synthase 2 catalytic subunit compare
BWI76_RS25070 -4.4 -2.0 hypothetical protein compare
BWI76_RS00975 -4.3 -9.9 dihydroxy-acid dehydratase compare
BWI76_RS26085 -4.3 -2.4 3-dehydroquinate synthase compare
BWI76_RS11850 -4.3 -9.3 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS08385 -4.3 -4.2 citrate (Si)-synthase compare
BWI76_RS11840 -4.3 -3.5 tryptophan synthase subunit alpha compare
BWI76_RS25645 -4.2 -8.6 shikimate dehydrogenase compare
BWI76_RS21360 -4.2 -8.1 L-aspartate oxidase compare
BWI76_RS22805 -4.2 -11.4 GTP diphosphokinase compare
BWI76_RS00845 -4.2 -10.4 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS04245 -4.2 -13.5 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS20895 -4.1 -5.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS16965 -4.0 -4.5 murein lipoprotein compare
BWI76_RS11860 -4.0 -10.0 anthranilate synthase component I compare
BWI76_RS22755 -3.9 -7.1 phosphoadenosine phosphosulfate reductase compare
BWI76_RS00785 -3.9 -7.9 cystathionine gamma-synthase compare
BWI76_RS04160 -3.9 -4.5 phosphoserine phosphatase compare
BWI76_RS25065 -3.8 -4.2 polyribonucleotide nucleotidyltransferase compare
BWI76_RS00835 -3.8 -10.8 phosphoenolpyruvate carboxylase compare
BWI76_RS15115 -3.8 -3.7 MFS transporter compare
BWI76_RS00345 -3.8 -4.0 protein disulfide oxidoreductase DsbA compare
BWI76_RS09640 -3.7 -2.5 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS18920 -3.6 -3.6 ATP phosphoribosyltransferase compare
BWI76_RS27390 -3.6 -3.4 ribonuclease PH compare
BWI76_RS25335 -3.6 -3.3 stringent starvation protein A compare
BWI76_RS20995 -3.6 -3.5 RNA degradosome polyphosphate kinase compare
BWI76_RS04680 -3.5 -9.2 2-isopropylmalate synthase compare
BWI76_RS23365 -3.5 -7.8 LysR family transcriptional regulator compare
BWI76_RS01610 -3.5 -4.2 phosphoribosylamine--glycine ligase compare
BWI76_RS09660 -3.4 -2.3 DNA translocase FtsK compare
BWI76_RS23480 -3.4 -12.4 EAL domain-containing protein compare
BWI76_RS26570 -3.3 -3.9 anion permease compare
BWI76_RS20145 -3.3 -1.9 NADH-quinone oxidoreductase subunit K compare
BWI76_RS02735 -3.3 -5.7 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS23240 -3.3 -2.3 exonuclease V subunit gamma compare
BWI76_RS26000 -3.3 -5.6 aspartate aminotransferase family protein compare
BWI76_RS22690 -3.3 -4.7 adenylyl-sulfate kinase compare
BWI76_RS00400 -3.2 -1.7 glutamine synthetase compare
BWI76_RS01200 -3.2 -2.1 diaminopimelate epimerase compare
BWI76_RS27440 -3.1 -5.9 DNA helicase RecG compare
BWI76_RS00180 -3.0 -1.4 F0F1 ATP synthase subunit epsilon compare
BWI76_RS17975 -3.0 -4.3 tail-specific protease compare
BWI76_RS09760 -3.0 -4.6 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS02530 -3.0 -2.0 tRNA dimethylallyltransferase compare
BWI76_RS21580 -2.9 -2.2 SsrA-binding protein compare
BWI76_RS22765 -2.9 -8.7 sulfite reductase subunit alpha compare
BWI76_RS04240 -2.9 -3.3 thr operon leader peptide compare
BWI76_RS20435 -2.9 -1.3 chorismate synthase compare
BWI76_RS21370 -2.9 -1.2 ATP-dependent RNA helicase SrmB compare
BWI76_RS20650 -2.8 -1.9 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS08210 -2.8 -3.1 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS01280 -2.7 -11.2 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
BWI76_RS17720 -2.7 -1.5 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS08580 -2.7 -3.2 quinolinate synthetase compare
BWI76_RS21140 -2.7 -2.1 molecular chaperone HscA compare
BWI76_RS00140 -2.6 -1.5 phosphate transport system regulator PhoU compare
BWI76_RS22760 -2.6 -5.2 sulfite reductase subunit beta compare
BWI76_RS21465 -2.6 -3.1 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS01220 -2.6 -7.1 DNA-dependent helicase II compare
BWI76_RS26390 -2.6 -3.4 cell division protein FtsX compare
BWI76_RS15215 -2.6 -1.2 N-acetyltransferase compare
BWI76_RS00600 -2.5 -7.7 LacI family transcriptional regulator compare
BWI76_RS25600 -2.5 -1.4 tRNA-Thr compare
BWI76_RS27310 -2.5 -8.8 glycosyltransferase compare
BWI76_RS27430 -2.4 -1.3 (p)ppGpp synthetase compare
BWI76_RS00985 -2.4 -6.0 transcriptional regulator IlvY compare
BWI76_RS15840 -2.4 -3.3 prophage protein compare
BWI76_RS15850 -2.3 -1.0 DUF1317 domain-containing protein compare
BWI76_RS00715 -2.2 -3.1 two-component sensor histidine kinase compare
BWI76_RS01545 -2.2 -2.8 thiamine biosynthesis protein ThiS compare
BWI76_RS08495 -2.2 -4.3 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS21350 -2.2 -1.9 anti-RNA polymerase sigma factor SigE compare
BWI76_RS15825 -2.1 -3.7 hypothetical protein compare
BWI76_RS13560 -2.1 -1.2 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS25060 -2.1 -3.9 lipoprotein NlpI compare
BWI76_RS26075 -2.1 -3.7 DNA adenine methylase compare
BWI76_RS12090 -2.1 -1.1 HNH endonuclease compare
BWI76_RS01205 -2.0 -3.6 DUF484 family protein compare
BWI76_RS23985 -2.0 -5.4 erythrose-4-phosphate dehydrogenase compare
BWI76_RS06525 -2.0 -3.3 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS20360 -2.0 -0.9 cell division protein DedD compare
BWI76_RS26395 -2.0 -4.2 cell division protein FtsE compare
BWI76_RS01530 -1.9 -4.2 2-iminoacetate synthase ThiH compare
BWI76_RS01535 -1.9 -4.1 thiazole synthase compare
BWI76_RS26775 -1.9 -3.0 endo-1,4-D-glucanase compare
BWI76_RS08520 -1.9 -1.8 colicin transporter TolQ compare
BWI76_RS01550 -1.9 -5.5 thiamine phosphate synthase compare
BWI76_RS23885 -1.9 -1.4 2-octaprenylphenol hydroxylase compare
BWI76_RS27305 -1.9 -6.4 glycosyl transferase compare
BWI76_RS23230 -1.8 -2.7 exodeoxyribonuclease V subunit beta compare
BWI76_RS22645 -1.8 -4.6 RNA polymerase sigma factor RpoS compare
BWI76_RS06765 -1.8 -2.4 transcriptional regulator compare
BWI76_RS01555 -1.8 -5.3 phosphomethylpyrimidine synthase ThiC compare
BWI76_RS15225 -1.8 -2.7 DeoR family transcriptional regulator compare
BWI76_RS08525 -1.8 -2.9 colicin transporter compare
BWI76_RS20970 -1.8 -1.6 phosphoribosylglycinamide formyltransferase compare
BWI76_RS01350 -1.7 -1.2 NAD(P)H-flavin reductase compare
BWI76_RS08530 -1.7 -1.5 protein TolA compare
BWI76_RS05120 -1.7 -8.2 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS19845 -1.6 -3.9 phosphatase compare
BWI76_RS26055 -1.6 -4.8 siroheme synthase compare
BWI76_RS20640 -1.6 -4.2 cysteine synthase A compare
BWI76_RS25870 -1.6 -1.1 elongation factor Tu compare
BWI76_RS09970 -1.6 -1.9 porin OmpA compare
BWI76_RS02580 -1.5 -1.4 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS15830 -1.5 -1.9 hypothetical protein compare
BWI76_RS20930 -1.5 -1.8 arsenate reductase (glutaredoxin) compare
BWI76_RS09190 -1.5 -2.7 hypothetical protein compare
BWI76_RS12240 -1.5 -5.4 terminase small subunit compare
BWI76_RS21570 -1.5 -1.9 RnfH family protein compare
BWI76_RS18385 -1.5 -1.3 hypothetical protein compare
BWI76_RS09635 -1.5 -0.9 amino acid ABC transporter ATP-binding protein compare
BWI76_RS21310 -1.5 -1.3 DNA repair protein RecO compare
BWI76_RS18550 -1.5 -1.7 tRNA-Asn compare
BWI76_RS04705 -1.5 -3.9 DNA-binding transcriptional regulator FruR compare
BWI76_RS06535 -1.5 -2.6 endopeptidase La compare
BWI76_RS20440 -1.5 -1.2 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS09650 -1.4 -3.4 hypothetical protein compare
BWI76_RS02410 -1.4 -1.3 EF-P beta-lysylation protein EpmB compare
BWI76_RS13275 -1.4 -1.8 hypothetical protein compare
BWI76_RS18755 -1.4 -1.4 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS25505 -1.4 -5.7 RNase E specificity factor CsrD compare
BWI76_RS13595 -1.4 -3.0 transcriptional regulator compare
BWI76_RS15990 -1.4 -3.2 serine protease compare
BWI76_RS19460 -1.4 -2.1 lipoprotein compare
BWI76_RS19840 -1.4 -1.3 hypothetical protein compare
BWI76_RS06395 -1.4 -3.3 tRNA 4-thiouridine(8) synthase ThiI compare
BWI76_RS15835 -1.4 -0.9 hypothetical protein compare
BWI76_RS24400 -1.4 -4.1 outer membrane channel protein TolC compare
BWI76_RS26455 -1.3 -2.1 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS25425 -1.3 -1.7 arginine repressor compare
BWI76_RS21480 -1.3 -2.3 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS13915 -1.3 -4.0 magnesium transport protein MgtC compare
BWI76_RS04270 -1.3 -2.5 transaldolase compare
BWI76_RS13400 -1.3 -2.9 GntR family transcriptional regulator compare
BWI76_RS26005 -1.3 -3.1 glutamine amidotransferase compare


Specific Phenotypes

For 2 genes in this experiment

For supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered across organisms