Experiment set23IT007 for Klebsiella michiganensis M5al

Compare to:

Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

200 most important genes:

  gene name fitness t score description  
BWI76_RS04470 -10.6 -7.3 carbamoyl phosphate synthase large subunit compare
BWI76_RS04465 -10.2 -7.0 carbamoyl-phosphate synthase small subunit compare
BWI76_RS02995 -9.5 -9.3 aspartate carbamoyltransferase compare
BWI76_RS11965 -8.4 -5.8 orotidine-5'-phosphate decarboxylase compare
BWI76_RS23265 -7.9 -3.9 hypothetical protein compare
BWI76_RS10990 -7.3 -3.8 dihydroorotase compare
BWI76_RS20965 -7.2 -4.2 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS09645 -7.0 -2.5 thioredoxin-disulfide reductase compare
BWI76_RS27385 -6.9 -8.2 orotate phosphoribosyltransferase compare
BWI76_RS20350 -6.8 -6.6 amidophosphoribosyltransferase compare
BWI76_RS09910 -6.5 -16.1 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS20895 -6.4 -4.4 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS23360 -6.2 -4.3 diaminopimelate decarboxylase compare
BWI76_RS20355 -5.9 -3.8 colicin V production protein compare
BWI76_RS27390 -5.8 -5.6 ribonuclease PH compare
BWI76_RS01615 -5.6 -7.7 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS21265 -5.6 -13.1 phosphoribosylformylglycinamidine synthase compare
BWI76_RS01210 -5.4 -3.6 tyrosine recombinase XerC compare
BWI76_RS15110 -5.3 -11.3 putative excinuclease ABC subunit A compare
BWI76_RS05840 -5.1 -7.0 glutamate 5-kinase compare
BWI76_RS08530 -5.1 -2.5 protein TolA compare
BWI76_RS17720 -5.1 -1.8 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS04645 -5.1 -4.9 3-dehydroquinase compare
BWI76_RS04510 -5.0 -3.0 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS01350 -5.0 -1.8 NAD(P)H-flavin reductase compare
BWI76_RS07985 -4.8 -1.7 fluoride ion transporter CrcB compare
BWI76_RS04305 -4.7 -1.7 molecular chaperone DnaJ compare
BWI76_RS07065 -4.5 -6.2 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS26085 -4.3 -2.6 3-dehydroquinate synthase compare
BWI76_RS18920 -4.2 -3.7 ATP phosphoribosyltransferase compare
BWI76_RS05835 -4.1 -3.0 gamma-glutamyl-phosphate reductase compare
BWI76_RS00715 -4.0 -4.2 two-component sensor histidine kinase compare
BWI76_RS04670 -4.0 -8.2 3-isopropylmalate dehydratase large subunit compare
BWI76_RS21475 -4.0 -5.5 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS07070 -4.0 -4.6 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS25320 -4.0 -9.5 glutamate synthase compare
BWI76_RS04160 -3.9 -7.1 phosphoserine phosphatase compare
BWI76_RS18935 -3.9 -10.0 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS00855 -3.8 -8.7 argininosuccinate lyase compare
BWI76_RS24575 -3.7 -1.7 hypothetical protein compare
BWI76_RS15115 -3.7 -3.6 MFS transporter compare
BWI76_RS09640 -3.7 -2.5 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS09755 -3.7 -6.8 phosphoserine transaminase compare
BWI76_RS08535 -3.6 -3.0 translocation protein TolB compare
BWI76_RS08385 -3.6 -4.6 citrate (Si)-synthase compare
BWI76_RS01610 -3.6 -6.3 phosphoribosylamine--glycine ligase compare
BWI76_RS18925 -3.5 -6.2 histidinol dehydrogenase compare
BWI76_RS22755 -3.5 -6.9 phosphoadenosine phosphosulfate reductase compare
BWI76_RS23220 -3.5 -10.3 amino-acid N-acetyltransferase compare
BWI76_RS00785 -3.5 -7.8 cystathionine gamma-synthase compare
BWI76_RS09660 -3.4 -2.4 DNA translocase FtsK compare
BWI76_RS00835 -3.4 -14.6 phosphoenolpyruvate carboxylase compare
BWI76_RS18940 -3.4 -5.4 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS21140 -3.4 -3.1 molecular chaperone HscA compare
BWI76_RS00850 -3.4 -7.5 acetylglutamate kinase compare
BWI76_RS04525 -3.3 -2.4 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS23240 -3.3 -2.2 exonuclease V subunit gamma compare
BWI76_RS05015 -3.2 -2.3 transcriptional regulator compare
BWI76_RS16965 -3.2 -5.6 murein lipoprotein compare
BWI76_RS25115 -3.2 -6.1 argininosuccinate synthase compare
BWI76_RS00960 -3.2 -5.0 acetolactate synthase 2 catalytic subunit compare
BWI76_RS25645 -3.2 -7.2 shikimate dehydrogenase compare
BWI76_RS26620 -3.2 -1.6 Fe-S biogenesis protein NfuA compare
BWI76_RS22765 -3.2 -9.5 sulfite reductase subunit alpha compare
BWI76_RS00400 -3.1 -1.8 glutamine synthetase compare
BWI76_RS04685 -3.1 -9.5 putative leucine operon leader peptide compare
BWI76_RS04245 -3.1 -12.8 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS00965 -3.1 -1.6 acetolactate synthase 2 small subunit compare
BWI76_RS00845 -3.1 -8.1 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS18930 -3.1 -4.1 histidinol-phosphate transaminase compare
BWI76_RS00980 -3.1 -10.5 PLP-dependent threonine dehydratase compare
BWI76_RS11860 -3.1 -5.2 anthranilate synthase component I compare
BWI76_RS22760 -3.0 -7.3 sulfite reductase subunit beta compare
BWI76_RS15225 -3.0 -2.3 DeoR family transcriptional regulator compare
BWI76_RS04255 -3.0 -8.0 threonine synthase compare
BWI76_RS26570 -3.0 -3.7 anion permease compare
BWI76_RS25315 -3.0 -11.3 glutamate synthase large subunit compare
BWI76_RS00180 -2.9 -1.5 F0F1 ATP synthase subunit epsilon compare
BWI76_RS03010 -2.9 -7.4 ornithine carbamoyltransferase compare
BWI76_RS02735 -2.9 -4.0 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS02530 -2.9 -2.0 tRNA dimethylallyltransferase compare
BWI76_RS01655 -2.9 -5.5 homoserine O-succinyltransferase compare
BWI76_RS11850 -2.9 -8.8 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS04665 -2.9 -13.7 3-isopropylmalate dehydratase small subunit compare
BWI76_RS21465 -2.9 -2.7 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS04250 -2.9 -5.5 homoserine kinase compare
BWI76_RS20435 -2.9 -1.4 chorismate synthase compare
BWI76_RS00990 -2.8 -8.9 ketol-acid reductoisomerase compare
BWI76_RS12090 -2.8 -1.6 HNH endonuclease compare
BWI76_RS09655 -2.8 -4.4 leucine-responsive regulatory protein compare
BWI76_RS00975 -2.8 -9.9 dihydroxy-acid dehydratase compare
BWI76_RS11840 -2.8 -6.0 tryptophan synthase subunit alpha compare
BWI76_RS01275 -2.8 -5.6 LysR family transcriptional regulator compare
BWI76_RS20650 -2.8 -1.9 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS11845 -2.8 -3.7 tryptophan synthase subunit beta compare
BWI76_RS17980 -2.7 -3.3 RNA chaperone ProQ compare
BWI76_RS26000 -2.7 -5.6 aspartate aminotransferase family protein compare
BWI76_RS04680 -2.7 -11.6 2-isopropylmalate synthase compare
BWI76_RS05200 -2.7 -1.9 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS04845 -2.7 -7.4 nicotinate-nucleotide pyrophosphorylase compare
BWI76_RS27310 -2.7 -8.1 glycosyltransferase compare
BWI76_RS25070 -2.7 -2.1 hypothetical protein compare
BWI76_RS25960 -2.6 -4.7 NUDIX hydrolase compare
BWI76_RS11855 -2.6 -6.2 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS18955 -2.6 -3.1 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS01220 -2.6 -7.1 DNA-dependent helicase II compare
BWI76_RS23230 -2.5 -1.7 exodeoxyribonuclease V subunit beta compare
BWI76_RS04675 -2.5 -5.0 3-isopropylmalate dehydrogenase compare
BWI76_RS15825 -2.5 -3.8 hypothetical protein compare
BWI76_RS20995 -2.4 -7.9 RNA degradosome polyphosphate kinase compare
BWI76_RS17975 -2.4 -5.8 tail-specific protease compare
BWI76_RS25425 -2.4 -2.3 arginine repressor compare
BWI76_RS08520 -2.4 -2.9 colicin transporter TolQ compare
BWI76_RS25335 -2.4 -2.8 stringent starvation protein A compare
BWI76_RS01200 -2.3 -2.2 diaminopimelate epimerase compare
BWI76_RS08580 -2.3 -4.2 quinolinate synthetase compare
BWI76_RS20390 -2.3 -3.1 erythronate-4-phosphate dehydrogenase compare
BWI76_RS16485 -2.3 -1.6 ribonuclease T compare
BWI76_RS08525 -2.3 -3.5 colicin transporter compare
BWI76_RS23480 -2.3 -9.9 EAL domain-containing protein compare
BWI76_RS15835 -2.3 -1.7 hypothetical protein compare
BWI76_RS06525 -2.3 -4.3 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS23920 -2.3 -4.6 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS16210 -2.2 -1.9 hypothetical protein compare
BWI76_RS19840 -2.2 -1.8 hypothetical protein compare
BWI76_RS22805 -2.2 -7.6 GTP diphosphokinase compare
BWI76_RS26775 -2.2 -6.5 endo-1,4-D-glucanase compare
BWI76_RS24285 -2.2 -5.7 cystathionine beta-lyase compare
BWI76_RS00345 -2.2 -3.9 protein disulfide oxidoreductase DsbA compare
BWI76_RS15840 -2.2 -2.8 prophage protein compare
BWI76_RS00805 -2.2 -2.0 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS00600 -2.2 -8.3 LacI family transcriptional regulator compare
BWI76_RS06765 -2.2 -3.3 transcriptional regulator compare
BWI76_RS20155 -2.1 -2.4 NADH-quinone oxidoreductase subunit I compare
BWI76_RS18950 -2.1 -2.9 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS27440 -2.1 -3.8 DNA helicase RecG compare
BWI76_RS21360 -2.1 -6.6 L-aspartate oxidase compare
BWI76_RS02410 -2.1 -1.4 EF-P beta-lysylation protein EpmB compare
BWI76_RS27430 -2.1 -1.6 (p)ppGpp synthetase compare
BWI76_RS04270 -2.0 -4.7 transaldolase compare
BWI76_RS01280 -2.0 -8.7 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
BWI76_RS23895 -2.0 -1.3 Xaa-Pro aminopeptidase compare
BWI76_RS26390 -2.0 -5.3 cell division protein FtsX compare
BWI76_RS06530 -2.0 -2.6 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS18755 -2.0 -1.7 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS23365 -2.0 -5.6 LysR family transcriptional regulator compare
BWI76_RS15830 -1.9 -2.6 hypothetical protein compare
BWI76_RS06015 -1.9 -1.8 hypothetical protein compare
BWI76_RS09760 -1.9 -2.7 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS21350 -1.9 -2.9 anti-RNA polymerase sigma factor SigE compare
BWI76_RS19770 -1.9 -2.3 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS01205 -1.9 -3.7 DUF484 family protein compare
BWI76_RS23985 -1.9 -5.2 erythrose-4-phosphate dehydrogenase compare
BWI76_RS16525 -1.9 -5.4 cyclopropane-fatty-acyl-phospholipid synthase compare
BWI76_RS01535 -1.8 -5.1 thiazole synthase compare
BWI76_RS01545 -1.8 -2.5 thiamine biosynthesis protein ThiS compare
BWI76_RS06770 -1.8 -7.1 Hha toxicity attenuator compare
BWI76_RS19700 -1.7 -3.0 deoxyribonuclease IV compare
BWI76_RS01555 -1.7 -7.0 phosphomethylpyrimidine synthase ThiC compare
BWI76_RS05120 -1.7 -10.5 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS13400 -1.7 -3.0 GntR family transcriptional regulator compare
BWI76_RS04705 -1.7 -7.5 DNA-binding transcriptional regulator FruR compare
BWI76_RS01550 -1.7 -4.0 thiamine phosphate synthase compare
BWI76_RS22690 -1.7 -2.3 adenylyl-sulfate kinase compare
BWI76_RS13785 -1.7 -1.6 ABC transporter permease compare
BWI76_RS01325 -1.7 -2.2 twin-arginine translocase subunit TatB compare
BWI76_RS20440 -1.6 -2.4 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS09330 -1.6 -3.1 baseplate assembly protein V compare
BWI76_RS19375 -1.6 -2.0 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS09650 -1.6 -3.6 hypothetical protein compare
BWI76_RS22645 -1.6 -5.0 RNA polymerase sigma factor RpoS compare
BWI76_RS14650 -1.6 -1.6 helix-turn-helix transcriptional regulator compare
BWI76_RS26395 -1.6 -3.6 cell division protein FtsE compare
BWI76_RS23760 -1.6 -1.7 tRNA-Gly compare
BWI76_RS13095 -1.6 -1.9 phenylacetate-CoA oxygenase subunit PaaB compare
BWI76_RS15850 -1.6 -0.7 DUF1317 domain-containing protein compare
BWI76_RS21375 -1.5 -2.0 autonomous glycyl radical cofactor GrcA compare
BWI76_RS20180 -1.5 -3.5 NADH-quinone oxidoreductase subunit C/D compare
BWI76_RS00985 -1.5 -5.2 transcriptional regulator IlvY compare
BWI76_RS01185 -1.5 -2.0 adenylate cyclase compare
BWI76_RS20970 -1.5 -1.6 phosphoribosylglycinamide formyltransferase compare
BWI76_RS09635 -1.5 -1.0 amino acid ABC transporter ATP-binding protein compare
BWI76_RS21000 -1.5 -6.8 exopolyphosphatase compare
BWI76_RS24945 -1.5 -1.3 glutamine amidotransferase compare
BWI76_RS12235 -1.5 -2.6 hypothetical protein compare
BWI76_RS10700 -1.5 -3.4 XRE family transcriptional regulator compare
BWI76_RS21580 -1.5 -1.3 SsrA-binding protein compare
BWI76_RS08495 -1.5 -2.6 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS25065 -1.5 -2.8 polyribonucleotide nucleotidyltransferase compare
BWI76_RS23805 -1.5 -6.1 ssDNA exonuclease RecJ compare
BWI76_RS15990 -1.4 -3.8 serine protease compare
BWI76_RS26075 -1.4 -3.4 DNA adenine methylase compare
BWI76_RS26665 -1.4 -3.6 DNA-binding response regulator compare
BWI76_RS27305 -1.4 -5.8 glycosyl transferase compare
BWI76_RS20165 -1.4 -2.6 NADH-quinone oxidoreductase subunit G compare
BWI76_RS04530 -1.4 -1.6 peptidylprolyl isomerase SurA compare
BWI76_RS23125 -1.4 -2.1 propanediol dehydratase small subunit compare
BWI76_RS21310 -1.4 -1.3 DNA repair protein RecO compare
BWI76_RS15950 -1.4 -1.8 dethiobiotin synthase compare
BWI76_RS05075 -1.4 -1.1 type II secretion system protein GspG compare


Specific Phenotypes

For 4 genes in this experiment

For supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered across organisms