Experiment set23IT006 for Klebsiella michiganensis M5al

Compare to:

Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

200 most important genes:

  gene name fitness t score description  
BWI76_RS02995 -10.6 -7.3 aspartate carbamoyltransferase compare
BWI76_RS04465 -10.2 -6.8 carbamoyl-phosphate synthase small subunit compare
BWI76_RS18930 -9.5 -4.8 histidinol-phosphate transaminase compare
BWI76_RS04470 -9.3 -14.0 carbamoyl phosphate synthase large subunit compare
BWI76_RS08580 -8.7 -4.4 quinolinate synthetase compare
BWI76_RS11965 -8.3 -4.9 orotidine-5'-phosphate decarboxylase compare
BWI76_RS20355 -7.7 -3.9 colicin V production protein compare
BWI76_RS20350 -7.6 -5.3 amidophosphoribosyltransferase compare
BWI76_RS01210 -7.5 -3.7 tyrosine recombinase XerC compare
BWI76_RS20965 -7.1 -3.5 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS23265 -7.0 -4.2 hypothetical protein compare
BWI76_RS09645 -7.0 -2.1 thioredoxin-disulfide reductase compare
BWI76_RS21475 -6.8 -5.3 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS25645 -6.7 -4.6 shikimate dehydrogenase compare
BWI76_RS20390 -6.5 -3.2 erythronate-4-phosphate dehydrogenase compare
BWI76_RS05835 -6.4 -3.7 gamma-glutamyl-phosphate reductase compare
BWI76_RS23360 -6.3 -3.6 diaminopimelate decarboxylase compare
BWI76_RS09910 -6.2 -15.3 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS23220 -6.1 -9.2 amino-acid N-acetyltransferase compare
BWI76_RS16965 -6.1 -4.0 murein lipoprotein compare
BWI76_RS00975 -6.1 -13.0 dihydroxy-acid dehydratase compare
BWI76_RS00715 -6.1 -4.2 two-component sensor histidine kinase compare
BWI76_RS18935 -5.7 -5.1 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS21265 -5.5 -11.2 phosphoribosylformylglycinamidine synthase compare
BWI76_RS07065 -5.5 -6.6 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS22755 -5.5 -7.4 phosphoadenosine phosphosulfate reductase compare
BWI76_RS18920 -5.3 -3.8 ATP phosphoribosyltransferase compare
BWI76_RS05840 -5.2 -5.8 glutamate 5-kinase compare
BWI76_RS03010 -5.2 -7.7 ornithine carbamoyltransferase compare
BWI76_RS04510 -5.1 -2.5 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS10990 -5.0 -2.5 dihydroorotase compare
BWI76_RS17975 -5.0 -7.3 tail-specific protease compare
BWI76_RS18940 -4.9 -4.7 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS27390 -4.9 -4.5 ribonuclease PH compare
BWI76_RS01610 -4.9 -7.3 phosphoribosylamine--glycine ligase compare
BWI76_RS25115 -4.9 -6.6 argininosuccinate synthase compare
BWI76_RS02735 -4.8 -4.1 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS00965 -4.8 -1.4 acetolactate synthase 2 small subunit compare
BWI76_RS04250 -4.8 -7.3 homoserine kinase compare
BWI76_RS18950 -4.8 -3.7 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS00855 -4.7 -8.4 argininosuccinate lyase compare
BWI76_RS15110 -4.7 -15.4 putative excinuclease ABC subunit A compare
BWI76_RS04525 -4.7 -2.4 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS08385 -4.7 -3.3 citrate (Si)-synthase compare
BWI76_RS00960 -4.6 -5.7 acetolactate synthase 2 catalytic subunit compare
BWI76_RS25320 -4.6 -9.1 glutamate synthase compare
BWI76_RS00850 -4.5 -6.5 acetylglutamate kinase compare
BWI76_RS26570 -4.5 -3.1 anion permease compare
BWI76_RS11845 -4.5 -1.5 tryptophan synthase subunit beta compare
BWI76_RS09755 -4.4 -6.5 phosphoserine transaminase compare
BWI76_RS27385 -4.4 -4.1 orotate phosphoribosyltransferase compare
BWI76_RS01615 -4.3 -6.6 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS26085 -4.2 -2.2 3-dehydroquinate synthase compare
BWI76_RS21465 -4.2 -4.4 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS04670 -4.1 -8.0 3-isopropylmalate dehydratase large subunit compare
BWI76_RS04645 -4.1 -6.3 3-dehydroquinase compare
BWI76_RS04240 -4.1 -2.2 thr operon leader peptide compare
BWI76_RS04255 -4.1 -11.1 threonine synthase compare
BWI76_RS00805 -4.1 -2.7 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS05015 -4.1 -2.9 transcriptional regulator compare
BWI76_RS23365 -4.0 -3.2 LysR family transcriptional regulator compare
BWI76_RS11840 -4.0 -3.6 tryptophan synthase subunit alpha compare
BWI76_RS04685 -3.9 -5.5 putative leucine operon leader peptide compare
BWI76_RS25315 -3.8 -9.1 glutamate synthase large subunit compare
BWI76_RS04665 -3.8 -13.5 3-isopropylmalate dehydratase small subunit compare
BWI76_RS00835 -3.8 -10.8 phosphoenolpyruvate carboxylase compare
BWI76_RS00980 -3.8 -8.5 PLP-dependent threonine dehydratase compare
BWI76_RS07070 -3.8 -4.2 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS08525 -3.8 -1.8 colicin transporter compare
BWI76_RS24285 -3.7 -5.5 cystathionine beta-lyase compare
BWI76_RS11860 -3.7 -5.8 anthranilate synthase component I compare
BWI76_RS11515 -3.7 -1.5 peptide-methionine (R)-S-oxide reductase compare
BWI76_RS20380 -3.6 -1.1 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS09640 -3.6 -2.5 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS27430 -3.6 -1.5 (p)ppGpp synthetase compare
BWI76_RS17980 -3.6 -6.0 RNA chaperone ProQ compare
BWI76_RS01655 -3.6 -7.1 homoserine O-succinyltransferase compare
BWI76_RS05450 -3.6 -1.5 ribonuclease HI compare
BWI76_RS00990 -3.6 -6.1 ketol-acid reductoisomerase compare
BWI76_RS09615 -3.5 -2.1 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS00845 -3.5 -5.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS04245 -3.5 -9.2 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS09660 -3.4 -2.2 DNA translocase FtsK compare
BWI76_RS21360 -3.3 -4.6 L-aspartate oxidase compare
BWI76_RS04675 -3.3 -3.6 3-isopropylmalate dehydrogenase compare
BWI76_RS25000 -3.3 -1.9 malonate decarboxylase acyl carrier protein compare
BWI76_RS20995 -3.3 -4.5 RNA degradosome polyphosphate kinase compare
BWI76_RS26000 -3.3 -7.3 aspartate aminotransferase family protein compare
BWI76_RS23240 -3.3 -2.3 exonuclease V subunit gamma compare
BWI76_RS22765 -3.2 -8.7 sulfite reductase subunit alpha compare
BWI76_RS01275 -3.2 -5.8 LysR family transcriptional regulator compare
BWI76_RS18925 -3.2 -1.8 histidinol dehydrogenase compare
BWI76_RS23920 -3.2 -3.8 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS22805 -3.2 -6.9 GTP diphosphokinase compare
BWI76_RS11855 -3.2 -3.4 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS23480 -3.2 -11.0 EAL domain-containing protein compare
BWI76_RS00400 -3.1 -1.5 glutamine synthetase compare
BWI76_RS11850 -3.1 -4.7 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS01200 -3.1 -2.0 diaminopimelate epimerase compare
BWI76_RS04680 -3.1 -7.7 2-isopropylmalate synthase compare
BWI76_RS01540 -3.0 -2.1 thiamine biosynthesis protein ThiS compare
BWI76_RS19375 -3.0 -2.2 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS20895 -2.9 -3.0 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS24900 -2.9 -2.6 DeoR family transcriptional regulator compare
BWI76_RS04845 -2.9 -5.3 nicotinate-nucleotide pyrophosphorylase compare
BWI76_RS02530 -2.9 -1.9 tRNA dimethylallyltransferase compare
BWI76_RS11835 -2.8 -2.3 putative regulatory protein MarR compare
BWI76_RS21140 -2.8 -2.6 molecular chaperone HscA compare
BWI76_RS20435 -2.8 -1.1 chorismate synthase compare
BWI76_RS21370 -2.8 -1.1 ATP-dependent RNA helicase SrmB compare
BWI76_RS04160 -2.8 -3.0 phosphoserine phosphatase compare
BWI76_RS06530 -2.8 -3.7 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS20650 -2.7 -1.6 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS01220 -2.7 -5.9 DNA-dependent helicase II compare
BWI76_RS25070 -2.6 -1.7 hypothetical protein compare
BWI76_RS15850 -2.6 -1.2 DUF1317 domain-containing protein compare
BWI76_RS00345 -2.6 -3.2 protein disulfide oxidoreductase DsbA compare
BWI76_RS09190 -2.6 -3.7 hypothetical protein compare
BWI76_RS01280 -2.6 -8.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
BWI76_RS15825 -2.6 -3.0 hypothetical protein compare
BWI76_RS23230 -2.6 -1.8 exodeoxyribonuclease V subunit beta compare
BWI76_RS09760 -2.5 -3.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS01545 -2.5 -4.0 thiamine biosynthesis protein ThiS compare
BWI76_RS04530 -2.5 -1.5 peptidylprolyl isomerase SurA compare
BWI76_RS12090 -2.5 -1.2 HNH endonuclease compare
BWI76_RS18955 -2.4 -3.0 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS26620 -2.4 -1.2 Fe-S biogenesis protein NfuA compare
BWI76_RS04705 -2.4 -7.4 DNA-binding transcriptional regulator FruR compare
BWI76_RS15840 -2.4 -3.3 prophage protein compare
BWI76_RS00785 -2.4 -3.4 cystathionine gamma-synthase compare
BWI76_RS00600 -2.3 -8.5 LacI family transcriptional regulator compare
BWI76_RS22760 -2.3 -5.2 sulfite reductase subunit beta compare
BWI76_RS20150 -2.3 -1.4 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS04515 -2.3 -1.3 Co2+/Mg2+ efflux protein ApaG compare
BWI76_RS25335 -2.3 -1.0 stringent starvation protein A compare
BWI76_RS00985 -2.2 -4.2 transcriptional regulator IlvY compare
BWI76_RS08535 -2.2 -1.8 translocation protein TolB compare
BWI76_RS09655 -2.2 -3.7 leucine-responsive regulatory protein compare
BWI76_RS09255 -2.2 -2.4 hypothetical protein compare
BWI76_RS26075 -2.2 -3.6 DNA adenine methylase compare
BWI76_RS01205 -2.2 -3.3 DUF484 family protein compare
BWI76_RS27310 -2.2 -4.3 glycosyltransferase compare
BWI76_RS20155 -2.2 -2.0 NADH-quinone oxidoreductase subunit I compare
BWI76_RS22690 -2.1 -1.8 adenylyl-sulfate kinase compare
BWI76_RS20970 -2.1 -1.5 phosphoribosylglycinamide formyltransferase compare
BWI76_RS02410 -2.1 -1.4 EF-P beta-lysylation protein EpmB compare
BWI76_RS15115 -2.0 -4.2 MFS transporter compare
BWI76_RS12470 -2.0 -1.3 thiosulfate sulfurtransferase PspE compare
BWI76_RS11900 -2.0 -1.2 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
BWI76_RS06535 -2.0 -4.4 endopeptidase La compare
BWI76_RS13785 -2.0 -1.6 ABC transporter permease compare
BWI76_RS11435 -2.0 -1.4 hypothetical protein compare
BWI76_RS26665 -2.0 -2.9 DNA-binding response regulator compare
BWI76_RS16075 -1.9 -1.3 oxidoreductase compare
BWI76_RS25600 -1.9 -1.1 tRNA-Thr compare
BWI76_RS01170 -1.9 -2.2 uroporphyrinogen-III C-methyltransferase compare
BWI76_RS06765 -1.9 -2.4 transcriptional regulator compare
BWI76_RS26055 -1.9 -5.6 siroheme synthase compare
BWI76_RS20160 -1.9 -2.0 NADH-quinone oxidoreductase subunit H compare
BWI76_RS18195 -1.9 -4.3 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB compare
BWI76_RS01535 -1.8 -3.1 thiazole synthase compare
BWI76_RS27440 -1.8 -2.6 DNA helicase RecG compare
BWI76_RS25065 -1.8 -2.0 polyribonucleotide nucleotidyltransferase compare
BWI76_RS09335 -1.8 -1.0 baseplate assembly protein W compare
BWI76_RS06525 -1.8 -3.7 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS16360 -1.8 -1.0 electron transport complex subunit RsxB compare
BWI76_RS12225 -1.8 -3.1 hypothetical protein compare
BWI76_RS12145 -1.8 -1.2 hypothetical protein compare
BWI76_RS26775 -1.8 -3.6 endo-1,4-D-glucanase compare
BWI76_RS21350 -1.8 -1.8 anti-RNA polymerase sigma factor SigE compare
BWI76_RS23985 -1.8 -4.0 erythrose-4-phosphate dehydrogenase compare
BWI76_RS06770 -1.8 -6.7 Hha toxicity attenuator compare
BWI76_RS14970 -1.8 -1.5 pyrroline-5-carboxylate reductase compare
BWI76_RS01530 -1.7 -4.9 2-iminoacetate synthase ThiH compare
BWI76_RS05120 -1.7 -8.8 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS11700 -1.7 -1.2 hypothetical protein compare
BWI76_RS15835 -1.7 -1.1 hypothetical protein compare
BWI76_RS26390 -1.7 -3.9 cell division protein FtsX compare
BWI76_RS01800 -1.7 -3.0 glucose-6-phosphate isomerase compare
BWI76_RS13595 -1.7 -2.9 transcriptional regulator compare
BWI76_RS13590 -1.7 -2.0 hypothetical protein compare
BWI76_RS09650 -1.6 -3.9 hypothetical protein compare
BWI76_RS08500 -1.6 -2.0 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS16805 -1.6 -1.6 basic amino acid ABC transporter substrate-binding protein compare
BWI76_RS00390 -1.6 -5.6 two-component system sensor histidine kinase NtrB compare
BWI76_RS19845 -1.6 -3.2 phosphatase compare
BWI76_RS10955 -1.6 -1.5 hypothetical protein compare
BWI76_RS15660 -1.6 -0.8 hypothetical protein compare
BWI76_RS21685 -1.6 -1.3 hypothetical protein compare
BWI76_RS11255 -1.6 -0.9 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS01550 -1.6 -2.6 thiamine phosphate synthase compare
BWI76_RS15225 -1.6 -1.1 DeoR family transcriptional regulator compare
BWI76_RS05810 -1.6 -1.2 hypothetical protein compare
BWI76_RS18885 -1.5 -1.4 nitrogen fixation regulatory protein compare
BWI76_RS20720 -1.5 -1.4 hypothetical protein compare
BWI76_RS07780 -1.5 -1.1 hypothetical protein compare
BWI76_RS08495 -1.5 -2.3 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS22645 -1.5 -2.6 RNA polymerase sigma factor RpoS compare
BWI76_RS27915 -1.5 -1.9 YceK/YidQ family lipoprotein compare
BWI76_RS15060 -1.5 -2.1 MarR family transcriptional regulator compare


Specific Phenotypes

For 1 genes in this experiment

For supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered across organisms