Experiment set23IT006 for Klebsiella michiganensis M5al

Compare to:

Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS07475 +2.2 2.8 DNA-binding transcriptional regulator RamA compare
BWI76_RS06910 +1.9 2.7 transcriptional regulator compare
BWI76_RS18770 +1.8 2.4 DNA gyrase inhibitor compare
BWI76_RS13755 +1.7 3.8 hypothetical protein compare
BWI76_RS27875 +1.6 2.2 membrane protein compare
BWI76_RS20230 +1.5 1.8 hypothetical protein compare
BWI76_RS16195 +1.5 2.6 hypothetical protein compare
BWI76_RS07640 +1.5 1.6 short chain dehydrogenase compare
BWI76_RS12870 +1.4 3.3 putative phytanoyl-CoA dioxygenase compare
BWI76_RS25870 +1.4 1.9 elongation factor Tu compare
BWI76_RS13250 +1.3 1.9 cytochrome b561 compare
BWI76_RS01995 +1.3 1.9 AraC family transcriptional regulator compare
BWI76_RS12670 +1.3 2.5 DNA polymerase V subunit UmuD compare
BWI76_RS17805 +1.2 1.6 membrane protein compare
BWI76_RS13980 +1.2 2.0 hypothetical protein compare
BWI76_RS07955 +1.2 1.7 nucleoside diphosphate kinase regulator compare
BWI76_RS25220 +1.2 2.6 outer membrane lipid asymmetry maintenance protein MlaD compare
BWI76_RS22130 +1.2 3.2 fructose-1-phosphate/6-phosphogluconate phosphatase compare
BWI76_RS26095 +1.2 1.6 shikimate kinase compare
BWI76_RS25285 +1.1 1.4 HPr family phosphocarrier protein compare
BWI76_RS26635 +1.1 4.1 hypothetical protein compare
BWI76_RS20490 +1.1 2.1 hypothetical protein compare
BWI76_RS12605 +1.1 2.7 hypothetical protein compare
BWI76_RS12735 +1.1 3.3 phage repressor protein compare
BWI76_RS13095 +1.1 2.6 phenylacetate-CoA oxygenase subunit PaaB compare
BWI76_RS05045 +1.1 1.3 general secretion pathway protein GspM compare
BWI76_RS24080 +1.0 1.1 DUF179 domain-containing protein compare
BWI76_RS24945 +1.0 1.4 glutamine amidotransferase compare
BWI76_RS15290 +1.0 1.5 transcriptional regulator compare
BWI76_RS01385 +1.0 2.0 potassium transporter compare
BWI76_RS23470 +1.0 7.7 hypothetical protein compare
BWI76_RS19670 +1.0 2.4 S-formylglutathione hydrolase compare
BWI76_RS11440 +1.0 1.3 hypothetical protein compare
BWI76_RS18780 +1.0 1.1 D-alanyl-D-alanine carboxypeptidase compare
BWI76_RS24380 +0.9 2.0 esterase YqiA compare
BWI76_RS05465 +0.9 1.4 amidohydrolase compare
BWI76_RS27865 +0.9 2.5 hypothetical protein compare
BWI76_RS05655 +0.9 1.9 hypothetical protein compare
BWI76_RS19865 +0.9 1.3 ecotin compare
BWI76_RS16515 +0.9 2.0 LysR family transcriptional regulator compare
BWI76_RS08275 +0.9 1.6 LexA regulated protein compare
BWI76_RS11015 +0.9 2.7 hypothetical protein compare
BWI76_RS18175 +0.9 1.8 hydrolase compare
BWI76_RS19450 +0.9 2.1 hypothetical protein compare
BWI76_RS19890 +0.9 1.3 alpha-ketoglutarate-dependent dioxygenase AlkB compare
BWI76_RS03800 +0.9 2.7 hypothetical protein compare
BWI76_RS19870 +0.9 1.7 malate:quinone oxidoreductase compare
BWI76_RS01895 +0.9 1.3 cupin compare
BWI76_RS18225 +0.9 1.8 universal stress protein C compare
BWI76_RS05915 +0.9 2.2 helix-turn-helix transcriptional regulator compare
BWI76_RS17200 +0.9 1.4 hypothetical protein compare
BWI76_RS16870 +0.8 2.0 LysR family transcriptional regulator compare
BWI76_RS12495 +0.8 1.2 2-Cys peroxiredoxin compare
BWI76_RS09765 +0.8 2.4 metalloprotease compare
BWI76_RS18360 +0.8 0.9 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS11365 +0.8 2.2 iron ABC transporter compare
BWI76_RS14300 +0.8 1.8 hypothetical protein compare
BWI76_RS10530 +0.8 2.2 GntR family transcriptional regulator with compare
BWI76_RS20330 +0.8 1.9 histidine/lysine/arginine/ornithine ABC transporter permease HisQ compare
BWI76_RS06730 +0.8 2.2 lac repressor compare
BWI76_RS27830 +0.8 2.8 type I toxin-antitoxin system toxin TisB compare
BWI76_RS09515 +0.8 1.9 arginine ABC transporter substrate-binding protein compare
BWI76_RS17155 +0.8 0.9 hypothetical protein compare
BWI76_RS18820 +0.8 2.3 nitrogenase molybdenum-iron protein subunit beta compare
BWI76_RS23575 +0.8 2.4 hypothetical protein compare
BWI76_RS21490 +0.8 4.4 GGDEF domain-containing protein compare
BWI76_RS14665 +0.8 1.3 minor fimbrial subunit YfcQ compare
BWI76_RS06745 +0.8 2.2 N-acetyltransferase GCN5 compare
BWI76_RS25450 +0.8 1.6 p-hydroxybenzoic acid efflux subunit AaeA compare
BWI76_RS23120 +0.8 1.2 propanediol dehydratase medium subunit compare
BWI76_RS06735 +0.8 1.4 50S ribosomal protein L31 compare
BWI76_RS07435 +0.8 1.6 LacI family transcriptional regulator compare
BWI76_RS25380 +0.7 2.0 oxaloacetate decarboxylase subunit beta compare
BWI76_RS23195 +0.7 1.9 ethanolamine utilization protein EutP compare
BWI76_RS19860 +0.7 2.1 hypothetical protein compare
BWI76_RS21485 +0.7 4.3 DUF4154 domain-containing protein compare
BWI76_RS20560 +0.7 1.1 hypothetical protein compare
BWI76_RS15690 +0.7 2.0 hypothetical protein compare
BWI76_RS05075 +0.7 0.8 type II secretion system protein GspG compare
BWI76_RS23395 +0.7 2.5 sugar ABC transporter substrate-binding protein compare
BWI76_RS10450 +0.7 1.1 tRNA-Tyr compare
BWI76_RS23520 +0.7 1.1 hypothetical protein compare
BWI76_RS20340 +0.7 2.4 histidine ABC transporter substrate-binding protein HisJ compare
BWI76_RS13805 +0.7 0.9 inorganic diphosphatase compare
BWI76_RS19480 +0.7 1.0 transcriptional regulator compare
BWI76_RS11525 +0.7 1.3 HNH endonuclease compare
BWI76_RS13495 +0.7 2.0 hypothetical protein compare
BWI76_RS07985 +0.7 0.8 fluoride ion transporter CrcB compare
BWI76_RS14820 +0.7 1.4 LysR family transcriptional regulator compare
BWI76_RS11815 +0.7 1.1 hypothetical protein compare
BWI76_RS17865 +0.7 2.7 aminodeoxychorismate synthase subunit I compare
BWI76_RS17765 +0.7 1.8 hypothetical protein compare
BWI76_RS17750 +0.7 3.6 Na+/H+ antiporter NhaB compare
BWI76_RS22420 +0.7 1.1 LacI family transcriptional regulator compare
BWI76_RS24745 +0.7 2.0 membrane protein compare
BWI76_RS13030 +0.7 1.6 site-specific recombinase, phage integrase family protein compare
BWI76_RS07820 +0.7 1.2 S-methyl-5-thioribose kinase compare
BWI76_RS27605 +0.7 1.5 hypothetical protein compare
BWI76_RS13110 +0.7 1.8 phenylacetic acid degradation protein compare
BWI76_RS06340 +0.7 0.7 hypothetical protein compare
BWI76_RS15450 +0.7 2.2 hypothetical protein compare
BWI76_RS06930 +0.7 2.5 iron export ABC transporter permease subunit FetB compare
BWI76_RS07730 +0.7 1.0 iron-enterobactin transporter membrane protein compare
BWI76_RS21495 +0.7 2.7 outer membrane lipoprotein compare
BWI76_RS03185 +0.7 2.0 CI repressor compare
BWI76_RS17220 +0.7 3.5 oligopeptide ABC transporter ATP-binding protein OppF compare
BWI76_RS17660 +0.7 2.0 AraC/XylS familytranscription regulator compare
BWI76_RS19750 +0.7 1.6 elongation factor P-like protein YeiP compare
BWI76_RS16640 +0.7 0.9 threonine transporter compare
BWI76_RS10770 +0.7 1.0 pyrimidine utilization protein C compare
BWI76_RS13055 +0.6 2.0 NmrA family protein compare
BWI76_RS02270 +0.6 1.8 DSBA oxidoreductase compare
BWI76_RS17370 +0.6 0.7 nitrate transporter NasD compare
BWI76_RS10040 +0.6 1.3 heat-shock protein HspQ compare
BWI76_RS12695 +0.6 1.2 zinc transporter ZntB compare
BWI76_RS15035 +0.6 0.7 metal ABC transporter permease compare
BWI76_RS06540 +0.6 1.6 DNA-binding protein HU-beta compare
BWI76_RS25640 +0.6 3.1 hypothetical protein compare
BWI76_RS15350 +0.6 0.8 hypothetical protein compare
BWI76_RS08950 +0.6 2.1 Asp/Glu/hydantoin racemase compare
BWI76_RS23555 +0.6 1.9 type 1 major fimbrial subunit precursor compare
BWI76_RS11185 +0.6 2.2 ligand-gated channel protein compare
BWI76_RS06475 +0.6 0.7 protoheme IX farnesyltransferase compare
BWI76_RS19270 +0.6 2.3 two-component sensor histidine kinase compare
BWI76_RS16260 +0.6 1.2 two-component sensor histidine kinase compare
BWI76_RS16315 +0.6 0.7 SirA-like protein compare
BWI76_RS10560 +0.6 1.6 gamma-glutamyltransferase compare
BWI76_RS06120 +0.6 0.7 membrane protein compare
BWI76_RS05500 +0.6 1.5 NADH:ubiquinone reductase (Na(+)-transporting) subunit C compare
BWI76_RS25035 +0.6 1.9 malonate transporter subunit MadM compare
BWI76_RS16275 +0.6 0.9 fumarate hydratase FumA compare
BWI76_RS09455 +0.6 1.0 YbjN domain-containing protein compare
BWI76_RS22850 +0.6 0.8 tRNA pseudouridine synthase TruC compare
BWI76_RS24130 +0.6 2.6 small integral C4-dicarboxylate membrane transporter compare
BWI76_RS24035 +0.6 1.4 hypothetical protein compare
BWI76_RS04110 +0.6 2.2 DUF1328 domain-containing protein compare
BWI76_RS20050 +0.6 0.8 hypothetical protein compare
BWI76_RS10055 +0.6 1.1 AraC family transcriptional regulator compare
BWI76_RS04055 +0.6 5.1 GGDEF domain-containing protein compare
BWI76_RS07925 +0.6 2.1 hypothetical protein compare
BWI76_RS11970 +0.6 2.0 stress response translation initiation inhibitor YciH compare
BWI76_RS10585 +0.6 1.8 amino acid ABC transporter ATP-binding protein compare
BWI76_RS05570 +0.6 0.7 hypothetical protein compare
BWI76_RS07265 +0.6 2.4 ABC transporter ATP-binding protein compare
BWI76_RS00865 +0.6 2.8 DNA-binding transcriptional regulator OxyR compare
BWI76_RS24885 +0.6 0.9 PTS galactitol transporter subunit IIB compare
BWI76_RS23595 +0.6 2.0 N-acetyltransferase compare
BWI76_RS09705 +0.6 1.5 transketolase compare
BWI76_RS04165 +0.6 2.1 DNA repair protein RadA compare
BWI76_RS13415 +0.6 2.3 spermidine/putrescine ABC transporter permease compare
BWI76_RS04955 +0.6 0.7 hypoxanthine phosphoribosyltransferase compare
BWI76_RS27940 +0.6 1.2 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
BWI76_RS12700 +0.6 2.0 hypothetical protein compare
BWI76_RS01935 +0.6 1.2 thiamin phosphate synthase compare
BWI76_RS23505 +0.6 4.7 ferrous iron transporter B compare
BWI76_RS12615 +0.6 2.8 LysR family transcriptional regulator compare
BWI76_RS13245 +0.6 0.9 DNA-damage-inducible protein I compare
BWI76_RS19980 +0.6 1.8 2-keto-3-deoxy-L-rhamnonate aldolase compare
BWI76_RS02580 +0.6 0.9 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS07970 +0.6 1.1 hypothetical protein compare
BWI76_RS26175 +0.6 1.8 DeoR/GlpR family transcriptional regulator compare
BWI76_RS22375 +0.6 1.3 pectin acetylesterase compare
BWI76_RS21050 +0.6 1.7 hypothetical protein compare
BWI76_RS26575 +0.6 1.5 universal stress protein B compare
BWI76_RS16135 +0.6 1.6 acetyl-CoA acetyltransferase compare
BWI76_RS21130 +0.6 0.9 Fe-S assembly protein IscX compare
BWI76_RS07595 +0.6 0.6 putative oxidoreductase compare
BWI76_RS16240 +0.6 1.0 anti-adapter protein IraM compare
BWI76_RS01260 +0.6 2.0 lysophospholipase L2 compare
BWI76_RS05520 +0.6 1.3 hypothetical protein compare
BWI76_RS21825 +0.6 2.5 hypothetical protein compare
BWI76_RS12040 +0.6 0.8 hypothetical protein compare
BWI76_RS12660 +0.6 2.5 hypothetical protein compare
BWI76_RS11920 +0.6 1.9 hypothetical protein compare
BWI76_RS19000 +0.6 2.9 acyltransferase compare
BWI76_RS02570 +0.6 2.9 transcriptional regulator compare
BWI76_RS09720 +0.6 1.4 PTS ascorbate transporter subunit IIB compare
BWI76_RS23390 +0.6 1.6 oligogalacturonide ABC transporter ATP-binding protein compare
BWI76_RS10895 +0.6 2.3 phosphatase compare
BWI76_RS11665 +0.6 2.3 exodeoxyribonuclease III compare
BWI76_RS11125 +0.6 0.7 metal-dependent hydrolase compare
BWI76_RS20410 +0.6 1.8 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC compare
BWI76_RS13970 +0.6 1.1 ABC transporter compare
BWI76_RS00740 +0.6 2.0 ribonuclease E activity regulator RraA compare
BWI76_RS25435 +0.6 1.4 membrane protein compare
BWI76_RS23355 +0.5 1.4 LacI family transcriptional regulator compare
BWI76_RS05335 +0.5 1.4 copper homeostasis/adhesion lipoprotein NlpE compare
BWI76_RS02180 +0.5 0.6 hypothetical protein compare
BWI76_RS23285 +0.5 1.4 hypothetical protein compare
BWI76_RS08360 +0.5 1.0 LamB/YcsF family protein compare
BWI76_RS02320 +0.5 1.7 divalent ion tolerance protein CutA compare
BWI76_RS09590 +0.5 2.3 ATP-dependent OLD family endonuclease compare
BWI76_RS20480 +0.5 2.6 formate/nitrite transporter compare
BWI76_RS08980 +0.5 0.7 DNA starvation/stationary phase protection protein compare
BWI76_RS13215 +0.5 0.8 type I glyceraldehyde-3-phosphate dehydrogenase compare
BWI76_RS00375 +0.5 1.9 hypothetical protein compare
BWI76_RS13435 +0.5 0.7 hypothetical protein compare
BWI76_RS09320 +0.5 1.5 P2 phage tail completion protein R compare
BWI76_RS18390 +0.5 1.3 hypothetical protein compare
BWI76_RS24185 +0.5 2.2 membrane protein compare


Specific Phenotypes

For 1 genes in this experiment

For supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered across organisms