Experiment set23IT006 for Klebsiella michiganensis M5al

Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Group: supernatant
Media: + supernatant from Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered (1 X)
Culturing: Koxy_ML2a, 24-well transparent microplate; Multitron, Aerobic, at 30 (C), shaken=700 rpm
By: Cat_Manuel_Trenton on 3-Mar-21

Specific Phenotypes

For 2 genes in this experiment

For supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered across organisms

SEED Subsystems

Subsystem	#Specific
Ammonia assimilation	1
Methionine Biosynthesis	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Methionine metabolism
• Biosynthesis of plant hormones

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
S-adenosyl-L-methionine salvage II	3	3	1
S-adenosyl-L-methionine salvage I	4	4	1
L-methionine biosynthesis III	4	2	1
L-methionine biosynthesis I	5	5	1
seleno-amino acid biosynthesis (plants)	5	3	1
L-methionine biosynthesis II	6	5	1
superpathway of L-homoserine and L-methionine biosynthesis	8	8	1
superpathway of L-methionine biosynthesis (transsulfuration)	9	9	1
superpathway of S-adenosyl-L-methionine biosynthesis	9	9	1
superpathway of L-methionine biosynthesis (by sulfhydrylation)	12	10	1
superpathway of L-lysine, L-threonine and L-methionine biosynthesis II	15	13	1
superpathway of L-lysine, L-threonine and L-methionine biosynthesis I	18	18	1
superpathway of seleno-compound metabolism	19	6	1
aspartate superpathway	25	24	1