Experiment set22IT067 for Burkholderia phytofirmans PsJN

Compare to:

D-Fructose carbon source

200 most important genes:

  gene name fitness t score description  
BPHYT_RS13705 -5.7 -4.0 chorismate synthase compare
BPHYT_RS17405 -4.8 -2.0 indole-3-glycerol phosphate synthase compare
BPHYT_RS16270 -3.5 -4.3 phosphoglycerate kinase compare
BPHYT_RS33880 -3.4 -11.0 N-(5'-phosphoribosyl)anthranilate isomerase compare
BPHYT_RS18705 -3.4 -2.3 5,10-methylenetetrahydrofolate reductase compare
BPHYT_RS04955 -3.4 -3.1 methionyl-tRNA synthetase compare
BPHYT_RS33915 -3.4 -11.0 isopropylmalate isomerase compare
BPHYT_RS06555 -3.3 -12.9 ketol-acid reductoisomerase compare
BPHYT_RS17890 -3.3 -3.1 shikimate kinase compare
BPHYT_RS33865 -3.3 -8.7 tryptophan synthase alpha chain compare
BPHYT_RS33835 -3.3 -10.9 O-succinylhomoserine sulfhydrylase compare
BPHYT_RS16735 -3.3 -8.6 phosphogluconate dehydratase compare
BPHYT_RS33900 -3.2 -11.9 3-isopropylmalate dehydrogenase compare
BPHYT_RS17885 -3.2 -5.2 3-dehydroquinate synthase compare
BPHYT_RS17690 -3.2 -13.7 imidazole glycerol phosphate synthase compare
BPHYT_RS15915 -3.2 -14.2 ornithine carbamoyltransferase compare
BPHYT_RS33645 -3.1 -8.2 homoserine kinase compare
BPHYT_RS17675 -3.1 -4.2 phosphoribosyl-AMP cyclohydrolase compare
BPHYT_RS15920 -3.0 -10.8 argininosuccinate synthase compare
BPHYT_RS06900 -3.0 -7.3 aspartate aminotransferase compare
BPHYT_RS08955 -3.0 -5.6 homoserine dehydrogenase compare
BPHYT_RS33875 -3.0 -11.8 tryptophan synthase subunit alpha compare
BPHYT_RS05225 -3.0 -10.0 phosphoenolpyruvate carboxylase compare
BPHYT_RS17670 -2.9 -6.8 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
BPHYT_RS14895 -2.9 -4.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
BPHYT_RS12530 -2.9 -9.6 ATP phosphoribosyltransferase regulatory subunit compare
BPHYT_RS01595 -2.8 -11.8 homoserine O-acetyltransferase compare
BPHYT_RS17855 -2.8 -15.2 glutamate synthase compare
BPHYT_RS14915 -2.7 -11.3 phosphoserine aminotransferase compare
BPHYT_RS16245 -2.7 -4.0 phosphoribosylaminoimidazole carboxylase compare
BPHYT_RS12845 -2.7 -17.3 ATPase compare
BPHYT_RS17685 -2.7 -8.2 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
BPHYT_RS16835 -2.7 -10.1 glyceraldehyde-3-phosphate dehydrogenase compare
BPHYT_RS03150 -2.7 -14.3 Phosphoglycerate dehydrogenase (EC:1.1.1.95) (from data) compare
BPHYT_RS09500 -2.6 -6.3 glucose-6-phosphate isomerase compare
BPHYT_RS18320 -2.6 -8.2 orotate phosphoribosyltransferase compare
BPHYT_RS17700 -2.6 -3.9 imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) (from data) compare
BPHYT_RS04740 -2.6 -7.1 sulfate adenylyltransferase subunit 2 compare
BPHYT_RS17715 -2.6 -10.4 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
BPHYT_RS04725 -2.5 -10.7 sulfite reductase compare
BPHYT_RS17390 -2.5 -15.9 anthranilate synthase subunit I compare
BPHYT_RS17400 -2.5 -7.5 anthranilate phosphoribosyltransferase compare
BPHYT_RS02590 -2.5 -7.3 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
BPHYT_RS04720 -2.5 -6.5 transcriptional regulator compare
BPHYT_RS06545 -2.4 -10.4 acetolactate synthase compare
BPHYT_RS04730 -2.4 -5.0 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
BPHYT_RS17395 -2.4 -3.6 anthranilate synthase subunit II compare
BPHYT_RS01590 -2.4 -9.6 methionine biosynthesis protein MetW compare
BPHYT_RS02765 -2.4 -1.5 cytochrome BD oxidase subunit I compare
BPHYT_RS33150 -2.3 -1.8 beta-lactamase compare
BPHYT_RS17680 -2.3 -3.5 imidazole glycerol phosphate synthase subunit HisF compare
BPHYT_RS10100 -2.3 -5.3 dihydroxy-acid dehydratase compare
BPHYT_RS16905 -2.2 -4.0 orotidine 5'-phosphate decarboxylase compare
BPHYT_RS01485 -2.1 -1.2 histidine kinase compare
BPHYT_RS33840 -2.1 -5.3 amidophosphoribosyltransferase compare
BPHYT_RS03015 -2.0 -1.4 aldolase compare
BPHYT_RS12465 -2.0 -2.3 inositol monophosphatase compare
BPHYT_RS02045 -2.0 -6.0 Fructokinase (EC 2.7.1.4) (from data) compare
BPHYT_RS12150 -2.0 -12.3 PII uridylyl-transferase compare
BPHYT_RS02610 -2.0 -3.8 glycerol-3-phosphate dehydrogenase [NAD(P)+] compare
BPHYT_RS06405 -1.9 -3.7 phosphoribosylamine--glycine ligase compare
BPHYT_RS02905 -1.7 -14.7 RNA polymerase subunit sigma-54 compare
BPHYT_RS04745 -1.7 -6.8 sulfate adenylyltransferase compare
BPHYT_RS14190 -1.7 -3.5 carbamoyl phosphate synthase large subunit compare
BPHYT_RS12840 -1.7 -3.5 pyruvate dehydrogenase compare
BPHYT_RS08960 -1.7 -1.0 threonine synthase compare
BPHYT_RS12940 -1.7 -8.5 signal transduction histidine kinase compare
BPHYT_RS02975 -1.6 -1.5 membrane protein compare
BPHYT_RS22735 -1.6 -3.7 sugar ABC transporter ATP-binding protein compare
BPHYT_RS12935 -1.6 -8.2 chemotaxis protein CheY compare
BPHYT_RS26435 -1.6 -2.5 hypothetical protein compare
BPHYT_RS05020 -1.6 -6.4 glucose-6-phosphate 1-dehydrogenase compare
BPHYT_RS06685 -1.6 -1.9 NADH:ubiquinone oxidoreductase subunit M compare
BPHYT_RS14910 -1.5 -6.3 chorismate mutase compare
BPHYT_RS26465 -1.5 -1.9 metallophosphoesterase compare
BPHYT_RS08150 -1.5 -1.7 membrane protein compare
BPHYT_RS22740 -1.5 -5.1 ABC transporter permease conserved
BPHYT_RS26965 -1.4 -1.8 L-lactate dehydrogenase, LldG subunit (from data) compare
BPHYT_RS17520 -1.4 -4.1 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase compare
BPHYT_RS36150 -1.4 -4.2 hypothetical protein compare
BPHYT_RS36275 -1.4 -1.5 hypothetical protein compare
BPHYT_RS33905 -1.4 -1.2 3-isopropylmalate dehydratase small subunit compare
BPHYT_RS11635 -1.3 -1.5 RNA polymerase subunit sigma-24 compare
BPHYT_RS02050 -1.3 -4.8 D-mannose isomerase (EC 5.3.1.7) (from data) compare
BPHYT_RS06610 -1.3 -1.1 triosephosphate isomerase compare
BPHYT_RS14195 -1.3 -1.6 carbamoyl phosphate synthase small subunit compare
BPHYT_RS33920 -1.3 -4.9 type II citrate synthase compare
BPHYT_RS03645 -1.3 -1.4 tRNA dimethylallyltransferase compare
BPHYT_RS06045 -1.3 -4.9 transaldolase compare
BPHYT_RS22940 -1.2 -1.4 pilus assembly protein TadE compare
BPHYT_RS14050 -1.2 -7.2 UDP pyrophosphate phosphatase compare
BPHYT_RS28535 -1.2 -1.2 response regulator receiver compare
BPHYT_RS05610 -1.2 -8.6 DNA-cytosine methyltransferase compare
BPHYT_RS08850 -1.2 -0.7 transcriptional regulator compare
BPHYT_RS09145 -1.1 -6.2 poly-beta-hydroxybutyrate polymerase compare
BPHYT_RS20155 -1.1 -1.2 hypothetical protein compare
BPHYT_RS08130 -1.1 -1.5 transposase compare
BPHYT_RS36460 -1.1 -3.3 hypothetical protein compare
BPHYT_RS27920 -1.1 -1.5 tricarballylate utilization protein B compare
BPHYT_RS09860 -1.1 -1.3 pilus assembly protein PilP compare
BPHYT_RS05960 -1.1 -4.4 endoribonuclease L-PSP compare
BPHYT_RS01095 -1.0 -1.3 hypothetical protein compare
BPHYT_RS14505 -1.0 -2.0 membrane protein compare
BPHYT_RS26775 -1.0 -1.7 chemotaxis protein CheB compare
BPHYT_RS24630 -1.0 -2.0 (2Fe-2S)-binding protein compare
BPHYT_RS16840 -1.0 -1.4 transketolase compare
BPHYT_RS11310 -1.0 -1.4 LysR family transcriptional regulator compare
BPHYT_RS07480 -1.0 -1.5 FAD-dependent oxidoreductase compare
BPHYT_RS10850 -1.0 -1.5 LysR family transcriptional regulator compare
BPHYT_RS01340 -1.0 -3.1 ChrB domain-containing protein compare
BPHYT_RS09385 -1.0 -0.9 FAD-dependent oxidoreductase compare
BPHYT_RS34655 -1.0 -1.7 2-amino-3-ketobutyrate CoA ligase compare
BPHYT_RS12925 -1.0 -1.1 exodeoxyribonuclease III compare
BPHYT_RS04335 -1.0 -1.6 membrane protein compare
BPHYT_RS10095 -1.0 -1.2 integrase compare
BPHYT_RS18255 -1.0 -2.2 phenylacetate-CoA oxygenase subunit PaaB compare
BPHYT_RS34765 -1.0 -3.1 chemotaxis protein compare
BPHYT_RS26490 -1.0 -1.1 hypothetical protein compare
BPHYT_RS33765 -1.0 -1.2 membrane protein compare
BPHYT_RS03655 -1.0 -1.8 membrane protein compare
BPHYT_RS20850 -0.9 -3.0 multidrug DMT transporter permease compare
BPHYT_RS31050 -0.9 -1.0 epimerase compare
BPHYT_RS16175 -0.9 -0.9 hemolysin D compare
BPHYT_RS28370 -0.9 -1.6 peroxidase compare
BPHYT_RS18340 -0.9 -1.0 n-acetyl-gamma-glutamyl-phosphate reductase compare
BPHYT_RS08565 -0.9 -0.5 dihydroorotate dehydrogenase compare
BPHYT_RS30750 -0.9 -1.1 GntR family transcriptional regulator compare
BPHYT_RS11810 -0.9 -1.6 LysR family transcriptional regulator compare
BPHYT_RS23570 -0.9 -4.2 chemotaxis protein CheY compare
BPHYT_RS15570 -0.9 -4.4 NAD-dependent dehydratase compare
BPHYT_RS01630 -0.9 -1.4 ATP-dependent protease ATPase subunit HslU compare
BPHYT_RS14900 -0.9 -2.3 prephenate dehydrogenase compare
BPHYT_RS08245 -0.9 -3.4 anti-sigma factor compare
BPHYT_RS17095 -0.9 -1.8 proline--tRNA ligase compare
BPHYT_RS03110 -0.9 -1.4 MarR family transcriptional regulator compare
BPHYT_RS33060 -0.9 -2.0 hypothetical protein compare
BPHYT_RS03830 -0.9 -2.5 hypothetical protein compare
BPHYT_RS25970 -0.9 -1.3 urea amidolyase compare
BPHYT_RS01170 -0.9 -1.2 hypothetical protein compare
BPHYT_RS02130 -0.9 -2.0 hydroxymethylglutaryl-CoA lyase compare
BPHYT_RS13605 -0.9 -0.8 tRNA-Pro compare
BPHYT_RS17945 -0.8 -2.0 cytochrome C biogenesis protein compare
BPHYT_RS25800 -0.8 -1.3 sugar ABC transporter permease compare
BPHYT_RS25135 -0.8 -1.7 hypothetical protein compare
BPHYT_RS30140 -0.8 -0.9 3-methylitaconate isomerase compare
BPHYT_RS05235 -0.8 -1.4 bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase compare
BPHYT_RS20665 -0.8 -1.1 LysR family transcriptional regulator compare
BPHYT_RS20880 -0.8 -0.9 polyketide cyclase compare
BPHYT_RS02100 -0.8 -1.4 AsnC family transcriptional regulator compare
BPHYT_RS16345 -0.8 -2.0 succinyl-CoA ligase [ADP-forming] subunit beta compare
BPHYT_RS30490 -0.8 -1.0 2-haloalkanoic acid dehalogenase compare
BPHYT_RS06375 -0.8 -2.6 ribonuclease compare
BPHYT_RS12060 -0.8 -1.2 hypothetical protein compare
BPHYT_RS21860 -0.8 -1.4 hypothetical protein compare
BPHYT_RS06345 -0.8 -3.7 sensor histidine kinase compare
BPHYT_RS08765 -0.8 -0.7 ABC transporter ATP-binding protein compare
BPHYT_RS34250 -0.8 -5.4 ABC transporter for L-rhamnose/L-fucose/xylitol, substrate-binding component (from data) compare
BPHYT_RS25470 -0.8 -0.8 alkylhydroperoxidase compare
BPHYT_RS33580 -0.8 -2.9 geranyltranstransferase compare
BPHYT_RS25645 -0.8 -2.1 dehydrogenase compare
BPHYT_RS36240 -0.8 -1.5 hypothetical protein compare
BPHYT_RS34410 -0.8 -1.1 hypothetical protein compare
BPHYT_RS03215 -0.8 -1.8 TetR family transcriptional regulator compare
BPHYT_RS33460 -0.8 -1.0 protocatechuate 3,4-dioxygenase subunit alpha compare
BPHYT_RS36130 -0.8 -1.2 hypothetical protein compare
BPHYT_RS07515 -0.8 -1.7 photosystem reaction center subunit H compare
BPHYT_RS31900 -0.7 -1.3 short-chain dehydrogenase/reductase SDR compare
BPHYT_RS16815 -0.7 -0.8 ureidoglycolate hydrolase compare
BPHYT_RS10725 -0.7 -1.9 polyketide cyclase compare
BPHYT_RS36470 -0.7 -1.6 hypothetical protein compare
BPHYT_RS11285 -0.7 -1.9 LacI family transcription regulator compare
BPHYT_RS09515 -0.7 -1.0 phosphoribosylformylglycinamidine synthase compare
BPHYT_RS27145 -0.7 -2.0 TetR family transcriptional regulator compare
BPHYT_RS09825 -0.7 -1.4 Fe-S protein compare
BPHYT_RS16090 -0.7 -1.3 hypothetical protein compare
BPHYT_RS26975 -0.7 -1.0 L-lactate dehydrogenase, LldE subunit (from data) compare
BPHYT_RS09895 -0.7 -1.1 LysR family transcriptional regulator compare
BPHYT_RS25165 -0.7 -1.9 HTH-type transcriptional regulator BetI compare
BPHYT_RS06540 -0.7 -3.4 RNA polymerase sigma70 factor compare
BPHYT_RS20625 -0.7 -1.8 3-oxoacyl-ACP reductase compare
BPHYT_RS27250 -0.7 -1.8 NAD-dependent epimerase/dehydratase compare
BPHYT_RS03995 -0.7 -2.4 protein tyrosine kinase compare
BPHYT_RS21150 -0.7 -2.7 NAD(P) transhydrogenase subunit alpha compare
BPHYT_RS09160 -0.7 -3.2 polyhydroxyalkanoate synthesis repressor PhaR compare
BPHYT_RS20775 -0.7 -1.3 3-ketoacyl-ACP reductase compare
BPHYT_RS02005 -0.7 -1.3 diguanylate phosphodiesterase compare
BPHYT_RS14105 -0.7 -5.5 exopolyphosphatase compare
BPHYT_RS00540 -0.7 -1.7 hypothetical protein compare
BPHYT_RS25540 -0.7 -1.3 phosphohydrolase compare
BPHYT_RS02180 -0.7 -1.4 hypothetical protein compare
BPHYT_RS36360 -0.7 -1.1 hypothetical protein compare
BPHYT_RS11125 -0.7 -1.0 alkylhydroperoxidase compare
BPHYT_RS11040 -0.7 -0.9 GntR family transcriptional regulator compare
BPHYT_RS12590 -0.7 -1.0 dual-specificity RNA methyltransferase RlmN compare
BPHYT_RS16215 -0.7 -2.6 sensor histidine kinase compare
BPHYT_RS04430 -0.7 -1.1 amino acid ABC transporter ATPase compare
BPHYT_RS02690 -0.6 -3.9 protoheme IX farnesyltransferase compare
BPHYT_RS08135 -0.6 -1.2 hypothetical protein compare
BPHYT_RS30450 -0.6 -0.6 ABC transporter permease compare
BPHYT_RS29710 -0.6 -1.0 FAD-binding molybdopterin dehydrogenase compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source D-Fructose in Burkholderia phytofirmans PsJN

For carbon source D-Fructose across organisms