Experiment set22IT057 for Pseudomonas fluorescens SBW25-INTG

Compare to:

Sodium acetate 30 mM carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
PFLU_RS04820 -3.7 -11.8 FUSC family protein compare
PFLU_RS04815 -3.7 -14.8 efflux transporter outer membrane subunit compare
PFLU_RS13065 -3.6 -6.0 ser/threonine protein phosphatase conserved
PFLU_RS00540 -3.4 -20.2 acetyl-CoA hydrolase/transferase family protein conserved
PFLU_RS04830 -3.3 -11.3 HlyD family secretion protein compare
PFLU_RS04810 -2.9 -14.3 LysR family transcriptional regulator compare
PFLU_RS03395 -2.7 -5.6 ribosomal-protein-alanine N-acetyltransferase compare
PFLU_RS09220 -2.6 -6.7 TetR/AcrR family transcriptional regulator compare
PFLU_RS28775 -2.6 -14.2 polyamine ABC transporter substrate-binding protein compare
PFLU_RS06260 -2.3 -14.2 succinyldiaminopimelate transaminase compare
PFLU_RS30380 -2.2 -5.6 hypothetical protein compare
PFLU_RS29595 -2.2 -5.8 type VI secretion system-associated protein TagF compare
PFLU_RS27600 -2.2 -9.8 LysR family transcriptional regulator compare
PFLU_RS02605 -2.1 -14.4 iron ABC transporter permease compare
PFLU_RS05675 -2.0 -11.4 ABC transporter ATP-binding protein compare
PFLU_RS02610 -1.9 -11.9 iron ABC transporter substrate-binding protein compare
PFLU_RS27595 -1.9 -9.5 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme compare
PFLU_RS29710 -1.8 -6.8 chorismate lyase compare
PFLU_RS08540 -1.8 -5.6 ATP-binding protein compare
PFLU_RS23095 -1.7 -7.3 23S rRNA pseudouridine(955/2504/2580) synthase RluC compare
PFLU_RS08080 -1.7 -6.9 S-methyl-5-thioribose-1-phosphate isomerase compare
PFLU_RS28955 -1.7 -7.1 TIGR02449 family protein compare
PFLU_RS00365 -1.6 -6.1 zinc ABC transporter permease subunit ZnuB compare
PFLU_RS05290 -1.5 -8.3 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB compare
PFLU_RS18425 -1.5 -5.3 META domain-containing protein compare
PFLU_RS00370 -1.4 -7.4 zinc ABC transporter ATP-binding protein ZnuC compare
PFLU_RS23015 -1.4 -5.0 TetR/AcrR family transcriptional regulator compare
PFLU_RS05665 -1.4 -7.6 aquaporin compare
PFLU_RS00240 -1.3 -8.2 oligopeptidase A compare
PFLU_RS05485 -1.3 -6.2 OpgC domain-containing protein compare
PFLU_RS22620 -1.2 -6.3 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase compare
PFLU_RS22500 -1.1 -5.6 xanthine dehydrogenase small subunit compare
PFLU_RS07700 -1.1 -7.7 DEAD/DEAH box helicase compare
PFLU_RS28460 -1.1 -6.3 insulinase family protein compare
PFLU_RS21405 -1.1 -6.4 urate hydroxylase PuuD compare
PFLU_RS06900 -1.1 -6.3 beta-glucosidase BglX compare
PFLU_RS29590 -1.1 -5.3 serine/threonine-protein phosphatase compare
PFLU_RS02450 -1.0 -5.5 DUF1249 domain-containing protein compare
PFLU_RS22265 +1.0 7.1 ATP-dependent RNA helicase HrpA compare
PFLU_RS04335 +1.4 9.2 carbon-nitrogen hydrolase family protein compare
PFLU_RS04395 +1.4 5.6 ribosome-associated translation inhibitor RaiA compare
PFLU_RS21310 +1.5 6.5 Smr/MutS family protein compare
PFLU_RS22965 +1.6 7.8 GNAT family N-acetyltransferase compare
PFLU_RS05145 +1.8 11.5 HPF/RaiA family ribosome-associated protein compare


Specific phenotypes for carbon source Sodium acetate across organisms