Experiment set22IT047 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

SJC15_cps8_1MOI

200 most detrimental genes:

  gene name fitness t score description  
BT2688 +4.1 9.6 outer membrane efflux protein (NCBI ptt file) compare
BT2686 +3.7 19.0 putative cation efflux transporter (NCBI ptt file) compare
BT2687 +3.5 14.4 cation efflux system protein (NCBI ptt file) compare
BT2689 +3.1 10.6 conserved hypothetical protein (NCBI ptt file) compare
BT0844 +2.7 4.8 hypothetical protein (NCBI ptt file) compare
BT2646 +2.7 3.7 conserved hypothetical protein (NCBI ptt file) compare
BT4698 +2.5 2.9 conserved hypothetical protein (NCBI ptt file) compare
BT1613 +2.4 9.9 conserved hypothetical protein (NCBI ptt file) compare
BT3937 +2.4 2.5 TPR-domain containing protein (NCBI ptt file) compare
BT4571 +2.3 3.7 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT4644 +2.1 4.5 putative anti-sigma factor (NCBI ptt file) compare
BT0932 +2.1 2.9 hypothetical protein (NCBI ptt file) compare
BT1462 +2.0 2.5 hypothetical protein (NCBI ptt file) compare
BT1080 +2.0 1.4 hypothetical protein (NCBI ptt file) compare
BT0777 +1.9 3.1 hypothetical protein (NCBI ptt file) compare
BT0846 +1.9 3.1 hypothetical protein (NCBI ptt file) compare
BT1202 +1.9 2.7 UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT1355 +1.9 7.2 hypothetical protein (NCBI ptt file) compare
BT1569 +1.8 4.8 conserved hypothetical protein (NCBI ptt file) compare
BT1346 +1.8 8.4 capsule biosynthesis protein capA (NCBI ptt file) compare
BT0815 +1.8 3.7 conserved hypothetical protein (NCBI ptt file) compare
BT3502 +1.8 5.0 hypothetical protein (NCBI ptt file) compare
BT1444 +1.8 2.6 conserved hypothetical protein (NCBI ptt file) compare
BT3839 +1.8 2.4 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT0178 +1.8 4.0 hypothetical protein (NCBI ptt file) compare
BT1345 +1.7 7.5 glycosyltransferase (NCBI ptt file) compare
BT1347 +1.7 7.0 conserved hypothetical protein (NCBI ptt file) compare
BT1262 +1.7 1.4 putative transcriptional regulator (NCBI ptt file) compare
BT1148 +1.7 3.3 putative NADH dehydrogenase/NAD(P)H nitroreductase (NCBI ptt file) compare
BT3772 +1.7 3.9 ribosomal large subunit pseudouridine synthase D (NCBI ptt file) compare
BT1411 +1.7 2.5 methylated-DNA--protein-cysteine methyltransferase (NCBI ptt file) compare
BT3690 +1.7 3.9 putative membrane protein (NCBI ptt file) compare
BT1047 +1.6 1.9 hypothetical protein (NCBI ptt file) compare
BT1230 +1.6 3.5 hypothetical protein (NCBI ptt file) compare
BT1348 +1.6 6.2 CDP-abequose synthase (NCBI ptt file) compare
BT2358 +1.6 2.0 hypothetical protein (NCBI ptt file) compare
BT3184 +1.6 8.5 L-aspartate oxidase (NCBI ptt file) compare
BT3832 +1.6 3.9 conserved hypothetical protein (NCBI ptt file) compare
BT3882 +1.6 1.7 putative DNA binding protein (NCBI ptt file) compare
BT2684 +1.6 1.5 hypothetical protein (NCBI ptt file) compare
BT1354 +1.6 7.9 putative flippase (NCBI ptt file) compare
BT0892 +1.6 3.0 dihydroorotate dehydrogenase (NCBI ptt file) compare
BT4097 +1.6 1.7 Trk system K+ uptake protein trkH (NCBI ptt file) compare
BT0242 +1.5 3.4 putative polysaccharide deacetylase (NCBI ptt file) compare
BT2417 +1.5 2.0 conserved hypothetical protein (NCBI ptt file) compare
BT1356 +1.5 5.0 putative capsule polysaccharide export protein (NCBI ptt file) compare
BT0699 +1.5 4.5 putative sugar transporter (NCBI ptt file) compare
BT0891 +1.5 3.6 dihydroorotate dehydrogenase electron transfer subunit (NCBI ptt file) compare
BT3164 +1.5 5.7 quinolinate synthetase A (NCBI ptt file) compare
BT4563 +1.5 2.2 hypothetical protein (NCBI ptt file) compare
BT0740 +1.5 1.7 flavoredoxin (NCBI ptt file) compare
BT1343 +1.4 5.5 putative capsule biosynthesis protein (NCBI ptt file) compare
BT1344 +1.4 5.9 putative glycosyltransferase (NCBI ptt file) compare
BT1559 +1.4 3.8 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT1358 +1.4 4.9 putative transcriptional regulator (NCBI ptt file) compare
BT1352 +1.4 4.8 putative glycosyltransferase HI1698 (NCBI ptt file) compare
BT0649 +1.4 2.2 thiamine biosynthesis protein ThiH (NCBI ptt file) compare
BT2031 +1.4 2.3 hypothetical protein (NCBI ptt file) compare
BT3215 +1.4 2.5 conserved hypothetical protein (NCBI ptt file) compare
BT0542 +1.4 2.0 conserved hypothetical protein (NCBI ptt file) compare
BT4400 +1.3 2.0 hypothetical protein (NCBI ptt file) compare
BT2799 +1.3 3.5 putative PfkB family carbohydrate kinase (NCBI ptt file) compare
BT1580 +1.3 1.8 lactoylglutathione lyase (NCBI ptt file) compare
BT1350 +1.3 6.1 CDP-glucose 4,6-dehydratase (NCBI ptt file) compare
BT1112 +1.3 1.6 transposase (NCBI ptt file) compare
BT0130 +1.3 2.2 putative oxidoreductase (NCBI ptt file) compare
BT0119 +1.3 2.2 hypothetical protein (NCBI ptt file) compare
BT1351 +1.3 3.9 glucose-1-phosphate cytidylyltransferase (NCBI ptt file) compare
BT0878 +1.2 2.0 ABC transporter, ATP-binding protein (NCBI ptt file) compare
BT4255 +1.2 2.7 DNA replication and repair protein RecF, ABC family ATPase (NCBI ptt file) compare
BT3856 +1.2 2.9 hypothetical protein (NCBI ptt file) compare
BT0490 +1.2 1.2 hypothetical protein (NCBI ptt file) compare
BT0505 +1.2 3.0 conserved hypothetical protein (NCBI ptt file) compare
BT1189 +1.2 2.7 conserved hypothetical protein (NCBI ptt file) compare
BT0567 +1.2 2.9 putative protein involved in barrier function of the cell envelope (NCBI ptt file) compare
BT2841 +1.2 2.5 pyruvate kinase (NCBI ptt file) compare
BT2514 +1.2 2.1 hypothetical protein (NCBI ptt file) compare
BT0508 +1.1 2.7 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT1306 +1.1 3.0 putative ABC transporter ATP-binding protein (NCBI ptt file) compare
BT2299 +1.1 1.9 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT1370 +1.1 2.1 NAD dependent nucleotide-diphosphate-sugar epimerase (NCBI ptt file) compare
BT0782 +1.1 1.2 hypothetical protein (NCBI ptt file) compare
BT1342 +1.1 5.9 putative UDP-glucuronic acid epimerase (NCBI ptt file) compare
BT2283 +1.1 1.1 hypothetical protein (NCBI ptt file) compare
BT3751 +1.1 2.4 outer membrane protein (NCBI ptt file) compare
BT0017 +1.1 2.8 hypothetical protein (NCBI ptt file) compare
BT0944 +1.1 1.5 hypothetical protein (NCBI ptt file) compare
BT0313 +1.1 1.5 flavodoxin (NCBI ptt file) compare
BT4666 +1.1 1.5 putative K+ uptake system protein (NCBI ptt file) compare
BT0472 +1.1 1.5 putative acyltransferase in colanic acid biosynthesis (NCBI ptt file) compare
BT2750 +1.1 3.4 putative protein-tyrosine-phosphatase (NCBI ptt file) compare
BT4526 +1.1 2.1 conserved hypothetical protein (NCBI ptt file) compare
BT1868 +1.1 1.6 conserved hypothetical protein (NCBI ptt file) compare
BT1353 +1.1 2.1 glycosyltransferase (NCBI ptt file) compare
BT1699 +1.1 2.7 conserved hypothetical protein (NCBI ptt file) compare
BT2059 +1.1 1.8 TonB (NCBI ptt file) compare
BT0804 +1.1 3.5 putative carbon-nitrogen hydrolase (NCBI ptt file) compare
BT4468 +1.1 1.6 conserved hypothetical protein (NCBI ptt file) compare
BT4762 +1.1 1.7 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT1583 +1.1 1.9 putative protein disulfide isomerase (NCBI ptt file) compare
BT0972 +1.1 1.6 putative oxidoreductase (NCBI ptt file) compare
BT4569 +1.1 3.1 hypothetical protein (NCBI ptt file) compare
BT2027 +1.1 2.6 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT0651 +1.1 1.4 thiamine biosynthesis protein ThiG (NCBI ptt file) compare
BT2284 +1.1 1.1 hypothetical protein (NCBI ptt file) compare
BT3980 +1.1 1.6 hypothetical protein (NCBI ptt file) compare
BT0309 +1.1 4.7 Dihydrolipoamide dehydrogenase (NCBI ptt file) compare
BT0314 +1.1 2.5 ribosomal protein L11 methyltransferase (NCBI ptt file) compare
BT3550 +1.1 2.5 putative long-chain-fatty-acid--CoA ligase (NCBI ptt file) compare
BT2281 +1.1 1.8 hypothetical protein (NCBI ptt file) compare
BT4485 +1.0 1.9 conserved hypothetical protein (NCBI ptt file) compare
BT2334 +1.0 3.1 conserved hypothetical protein (NCBI ptt file) compare
BT1367 +1.0 2.7 hydrolase, metal-dependent (NCBI ptt file) compare
BT1793 +1.0 2.2 integrase protein (NCBI ptt file) compare
BT1733 +1.0 4.8 putative phosphoribosylformylglycinamidine synthase (NCBI ptt file) compare
BT0790 +1.0 2.6 phosphomethylpyrimidine kinase (NCBI ptt file) compare
BT0514 +1.0 2.9 conserved hypothetical protein (NCBI ptt file) compare
BT0526 +1.0 3.0 L-asparaginase I (NCBI ptt file) compare
BT3251 +1.0 3.2 conserved hypothetical protein, putative integral membrane protein (NCBI ptt file) compare
BT0322 +1.0 1.8 putative oxidoreductase (NCBI ptt file) compare
BT1135 +1.0 2.2 hypothetical protein (NCBI ptt file) compare
BT1138 +1.0 2.9 transposase (NCBI ptt file) compare
BT1689 +1.0 3.1 oxaloacetate decarboxylase beta chain (NCBI ptt file) compare
BT3363 +1.0 1.4 lipopolysaccharide core biosynthesis protein LpsA (NCBI ptt file) compare
BT2741 +1.0 1.8 sigma-54 modulation protein (NCBI ptt file) compare
BT0013 +1.0 1.6 hypothetical protein (NCBI ptt file) compare
BT2288 +1.0 2.2 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT1735 +1.0 1.9 chromate transport protein (NCBI ptt file) compare
BT0100 +1.0 2.0 hypothetical protein (NCBI ptt file) compare
BT1286 +1.0 2.0 putative two-component system response regulator (NCBI ptt file) compare
BT2815 +1.0 1.7 putative mutT family protein (NCBI ptt file) compare
BT1708 +1.0 3.6 putative capsular polysaccharide biosynthesis glycosyltransferase (NCBI ptt file) compare
BT0955 +1.0 1.6 conserved hypothetical protein, putative membrane protein (NCBI ptt file) compare
BT4094 +1.0 2.9 conserved hypothetical protein (NCBI ptt file) compare
BT0902 +1.0 1.2 hypothetical protein (NCBI ptt file) compare
BT1740 +0.9 2.2 hypothetical protein (NCBI ptt file) compare
BT0776 +0.9 0.9 conserved hypothetical protein (NCBI ptt file) compare
BT3905 +0.9 3.9 putative alkaline protease aprF (NCBI ptt file) compare
BT4018 +0.9 1.1 hypothetical protein (NCBI ptt file) compare
BT4432 +0.9 2.3 putative non-specific DNA-binding protein HU-1 (NCBI ptt file) compare
BT1217 +0.9 2.1 two-component system response regulator (NCBI ptt file) compare
BT1291 +0.9 2.7 spermidine/putrescine transport ATP-binding protein (NCBI ptt file) compare
BT4211 +0.9 1.8 putative phosphoribosylformylglycinamidine cyclo-ligase (NCBI ptt file) compare
BT2542 +0.9 2.8 putative haloacid dehalogenase-like hydrolase (NCBI ptt file) compare
BT1154 +0.9 1.8 ATP-independent RNA helicase (NCBI ptt file) compare
BT1419 +0.9 1.9 hypothetical protein (NCBI ptt file) compare
BT4720 +0.9 3.1 putative RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT1483 +0.9 2.3 two-component system sensor histidine kinase (NCBI ptt file) compare
BT1070 +0.9 2.9 conserved hypothetical protein (NCBI ptt file) compare
BT1190 +0.9 3.3 putative ATP GTP-binding protein (NCBI ptt file) compare
BT3441 +0.9 1.5 hypothetical protein (NCBI ptt file) compare
BT4327 +0.9 3.0 hypothetical protein (NCBI ptt file) compare
BT2633 +0.9 1.7 hypothetical protein (NCBI ptt file) compare
BT3760 +0.9 2.9 arginosuccinate synthetase (EC 6.3.4.5) (from data) compare
BT3223 +0.9 3.0 hypothetical protein (NCBI ptt file) compare
BT0498 +0.9 2.3 hypothetical protein (NCBI ptt file) compare
BT4514 +0.9 3.1 hypothetical protein (NCBI ptt file) compare
BT1216 +0.9 2.6 putative two-component system sensor protein, without kinase domain (NCBI ptt file) compare
BT0352 +0.9 0.9 conserved hypothetical protein (NCBI ptt file) compare
BT1206 +0.9 2.3 conserved hypothetical protein (NCBI ptt file) compare
BT0796 +0.9 2.6 conserved hypothetical protein (NCBI ptt file) compare
BT4249 +0.9 0.7 hypothetical protein (NCBI ptt file) compare
BT1944 +0.9 1.7 putative transposase (NCBI ptt file) compare
BT4469 +0.9 1.4 conserved hypothetical protein (NCBI ptt file) compare
BT3798 +0.9 1.9 conserved hypothetical protein (NCBI ptt file) compare
BT1341 +0.9 4.2 UDP-glucose 6-dehydrogenase (NCBI ptt file) compare
BT0149 +0.9 3.2 peptidase (NCBI ptt file) compare
BT1340 +0.9 3.9 putative lipopolysaccharide biosynthesis glycosyltransferase (NCBI ptt file) compare
BT0468 +0.9 2.1 putative F420H2-dehydrogenase 40 kDa subunit (NCBI ptt file) compare
BT1609 +0.9 1.7 conserved hypothetical protein (NCBI ptt file) compare
BT1402 +0.9 1.6 iron-sulfur flavoprotein (NCBI ptt file) compare
BT0780 +0.9 1.6 acetyltransferase (NCBI ptt file) compare
BT1526 +0.9 2.2 myo-inositol-1-phosphate synthase (NCBI ptt file) compare
BT0089 +0.9 1.4 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT1855 +0.9 0.9 putative methyl transferase (NCBI ptt file) compare
BT0962 +0.9 2.5 aldo/keto reductase (NCBI ptt file) compare
BT2974 +0.9 0.9 hypothetical protein (NCBI ptt file) compare
BT1524 +0.8 1.1 hypothetical protein (NCBI ptt file) compare
BT3213 +0.8 1.3 tRNA pseudouridine synthase B (NCBI ptt file) compare
BT0051 +0.8 2.1 putative glycosyltransferase (NCBI ptt file) compare
BT1520 +0.8 1.4 putative transcriptional regulator (NCBI ptt file) compare
BT1844 +0.8 2.9 transcriptional regulator, putative iron uptake regulation protein (NCBI ptt file) compare
BT0400 +0.8 0.6 putative tyrosine-protein kinase in capsular polysaccharide biosynthesis region (NCBI ptt file) compare
BT2685 +0.8 1.8 hypothetical protein (NCBI ptt file) compare
BT0241 +0.8 1.3 hypothetical protein (NCBI ptt file) compare
BT2185 +0.8 2.4 hypothetical protein (NCBI ptt file) compare
BT4556 +0.8 1.5 hypothetical protein (NCBI ptt file) compare
BT3530 +0.8 4.1 putative alpha-1,2-mannosidase (NCBI ptt file) compare
BT0548 +0.8 1.8 diaminopimelate epimerase (NCBI ptt file) compare
BT4061 +0.8 1.2 NADH dehydrogenase I, chain K (NCBI ptt file) compare
BT1737 +0.8 3.0 conserved hypothetical protein, putative secreted protein (NCBI ptt file) compare
BT3571 +0.8 2.0 hypothetical protein (NCBI ptt file) compare
BT1919 +0.8 2.1 conserved hypothetical protein with a conserved domain (NCBI ptt file) compare
BT4725 +0.8 2.1 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT0556 +0.8 1.8 carbamoyl phosphate synthetase III (glutamine-hydrolyzing) (NCBI ptt file) compare
BT0543 +0.8 2.6 glutamine synthetase (NCBI ptt file) compare
BT1400 +0.8 2.8 conserved hypothetical protein (NCBI ptt file) compare
BT2996 +0.8 1.9 hypothetical protein (NCBI ptt file) compare
BT2291 +0.8 1.7 hypothetical protein (NCBI ptt file) compare
BT0368 +0.8 3.2 alpha-L-arabinofuranosidase A precursor (NCBI ptt file) compare


Specific Phenotypes

For 2 genes in this experiment

For phage phage_SJC15 in Bacteroides thetaiotaomicron VPI-5482

For phage phage_SJC15 across organisms