Experiment set22IT044 for Pseudomonas fluorescens SBW25-INTG

Compare to:

L-Valine 10 mM carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
PFLU_RS22685 -3.7 -6.1 2-methylcitrate synthase conserved
PFLU_RS25545 -3.6 -8.7 LysR family transcriptional regulator conserved
PFLU_RS25540 -3.6 -5.5 CoA-acylating methylmalonate-semialdehyde dehydrogenase conserved
PFLU_RS19370 -3.5 -7.1 dihydrolipoyl dehydrogenase conserved
PFLU_RS19355 -3.5 -6.7 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha conserved
PFLU_RS19360 -3.4 -8.3 alpha-ketoacid dehydrogenase subunit beta conserved
PFLU_RS25535 -3.4 -7.5 3-hydroxyisobutyrate dehydrogenase conserved
PFLU_RS27360 -3.3 -5.4 lipoate--protein ligase family protein conserved
PFLU_RS13355 -3.2 -7.6 threonine ammonia-lyase, biosynthetic conserved
PFLU_RS14785 -3.2 -6.4 enoyl-CoA hydratase/isomerase family protein conserved
PFLU_RS18950 -2.6 -7.8 MerR family DNA-binding transcriptional regulator compare
PFLU_RS22680 -2.6 -11.3 Fe/S-dependent 2-methylisocitrate dehydratase AcnD compare
PFLU_RS22695 -2.5 -8.2 GntR family transcriptional regulator compare
PFLU_RS09220 -1.6 -6.4 TetR/AcrR family transcriptional regulator compare
PFLU_RS07270 -1.5 -7.0 glycine cleavage system protein R compare
PFLU_RS07150 -1.5 -7.3 tripartite tricarboxylate transporter substrate binding protein compare
PFLU_RS21535 -1.5 -7.2 TetR/AcrR family transcriptional regulator compare
PFLU_RS18980 -1.4 -8.1 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha conserved
PFLU_RS00915 -1.2 -6.4 4-aminobutyrate--2-oxoglutarate transaminase compare
PFLU_RS07570 -1.1 -7.4 VWA domain-containing protein compare
PFLU_RS03780 +1.1 5.5 phosphate acetyltransferase conserved
PFLU_RS14750 +1.3 6.8 tetratricopeptide repeat protein compare
PFLU_RS28200 +1.3 5.5 16S rRNA (uracil(1498)-N(3))-methyltransferase compare
PFLU_RS01795 +1.4 6.1 glycine betaine/L-proline ABC transporter ATP-binding protein compare
PFLU_RS23015 +1.4 7.2 TetR/AcrR family transcriptional regulator compare
PFLU_RS08685 +1.5 5.7 c-type cytochrome biogenesis protein CcmI compare
PFLU_RS30335 +1.5 6.5 AlpA family phage regulatory protein compare
PFLU_RS26500 +1.6 5.7 Lrp/AsnC family transcriptional regulator compare
PFLU_RS29825 +1.6 6.3 asparaginase compare
PFLU_RS04135 +1.7 10.5 HAMP domain-containing histidine kinase compare
PFLU_RS01545 +1.7 12.4 GABA permease conserved
PFLU_RS24265 +1.7 8.2 iron-sulfur-binding ferredoxin reductase compare
PFLU_RS19490 +1.7 10.4 LacI family transcriptional regulator compare
PFLU_RS27835 +1.9 7.3 low specificity L-threonine aldolase compare
PFLU_RS06640 +1.9 13.9 high-affinity branched-chain amino acid ABC transporter permease LivH conserved
PFLU_RS06645 +1.9 11.9 branched-chain amino acid ABC transporter substrate-binding protein conserved
PFLU_RS06635 +2.0 14.9 high-affinity branched-chain amino acid ABC transporter permease LivM conserved
PFLU_RS01890 +2.2 5.1 twin-arginine translocase TatA/TatE family subunit compare
PFLU_RS30455 +2.3 9.1 type II toxin-antitoxin system RelE/ParE family toxin compare
PFLU_RS06625 +2.3 9.7 ABC transporter ATP-binding protein conserved
PFLU_RS09890 +2.5 7.4 homoserine dehydrogenase compare
PFLU_RS25510 +2.8 21.7 amino acid permease conserved
PFLU_RS19090 +4.0 6.8 pyridoxal-phosphate dependent enzyme conserved
PFLU_RS09900 +5.8 13.2 amino acid permease compare
PFLU_RS29820 +5.8 53.3 alanine:cation symporter family protein conserved
PFLU_RS30605 +6.0 12.0 Lrp/AsnC family transcriptional regulator compare


Specific phenotypes for carbon source L-Valine across organisms