Experiment set22IT043 for Pseudomonas fluorescens SBW25-INTG

Compare to:

L-Valine 10 mM carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
PFLU_RS14780 -3.5 -5.8 acyl-CoA dehydrogenase conserved
PFLU_RS25545 -3.4 -8.0 LysR family transcriptional regulator conserved
PFLU_RS19370 -3.4 -6.4 dihydrolipoyl dehydrogenase conserved
PFLU_RS19360 -3.3 -7.9 alpha-ketoacid dehydrogenase subunit beta conserved
PFLU_RS19365 -3.3 -5.8 2-oxo acid dehydrogenase subunit E2 conserved
PFLU_RS14785 -3.1 -5.2 enoyl-CoA hydratase/isomerase family protein conserved
PFLU_RS19355 -3.1 -7.7 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha conserved
PFLU_RS22680 -2.7 -7.4 Fe/S-dependent 2-methylisocitrate dehydratase AcnD compare
PFLU_RS22695 -2.5 -7.7 GntR family transcriptional regulator compare
PFLU_RS18950 -2.3 -7.6 MerR family DNA-binding transcriptional regulator compare
PFLU_RS22905 -2.2 -6.6 DUF4398 domain-containing protein compare
PFLU_RS13355 -2.2 -6.8 threonine ammonia-lyase, biosynthetic conserved
PFLU_RS07270 -1.5 -7.8 glycine cleavage system protein R compare
PFLU_RS25280 -1.4 -5.3 flavodoxin conserved
PFLU_RS26205 -1.4 -5.9 YbdD/YjiX family protein compare
PFLU_RS07575 -1.3 -8.5 MoxR family ATPase compare
PFLU_RS18975 -1.2 -6.4 gamma-carboxygeranoyl-CoA hydratase compare
PFLU_RS03000 -1.1 -5.1 MarC family protein compare
PFLU_RS28870 -1.0 -5.8 Lrp/AsnC family transcriptional regulator conserved
PFLU_RS08685 +1.5 6.3 c-type cytochrome biogenesis protein CcmI compare
PFLU_RS01795 +1.6 5.3 glycine betaine/L-proline ABC transporter ATP-binding protein compare
PFLU_RS06625 +1.6 5.9 ABC transporter ATP-binding protein conserved
PFLU_RS30335 +1.7 6.9 AlpA family phage regulatory protein compare
PFLU_RS01545 +1.7 12.6 GABA permease conserved
PFLU_RS06645 +1.7 12.1 branched-chain amino acid ABC transporter substrate-binding protein conserved
PFLU_RS24265 +1.7 9.2 iron-sulfur-binding ferredoxin reductase compare
PFLU_RS04135 +1.9 11.5 HAMP domain-containing histidine kinase compare
PFLU_RS06640 +1.9 14.1 high-affinity branched-chain amino acid ABC transporter permease LivH conserved
PFLU_RS06635 +1.9 14.8 high-affinity branched-chain amino acid ABC transporter permease LivM conserved
PFLU_RS29825 +2.0 7.3 asparaginase compare
PFLU_RS01890 +2.1 6.4 twin-arginine translocase TatA/TatE family subunit compare
PFLU_RS27835 +2.2 6.9 low specificity L-threonine aldolase compare
PFLU_RS09895 +2.3 5.9 aldehyde dehydrogenase family protein compare
PFLU_RS19490 +2.6 15.3 LacI family transcriptional regulator compare
PFLU_RS30455 +2.8 10.0 type II toxin-antitoxin system RelE/ParE family toxin compare
PFLU_RS25510 +3.1 22.7 amino acid permease conserved
PFLU_RS09890 +3.4 6.4 homoserine dehydrogenase compare
PFLU_RS29820 +5.8 54.1 alanine:cation symporter family protein conserved
PFLU_RS30605 +6.8 11.7 Lrp/AsnC family transcriptional regulator compare
PFLU_RS09900 +7.2 14.9 amino acid permease compare


Specific phenotypes for carbon source L-Valine across organisms