Experiment set21IT074 for Pseudomonas fluorescens SBW25-INTG

Compare to:

D-Sorbitol 10 mM carbon source

200 most detrimental genes:

  gene name fitness t score description  
PFLU_RS09500 +1.5 1.7 hypothetical protein compare
PFLU_RS01005 +1.5 2.9 ABC transporter ATP-binding protein compare
PFLU_RS14050 +1.4 3.0 hypothetical protein compare
PFLU_RS13665 +1.3 1.8 MarR family transcriptional regulator compare
PFLU_RS25025 +1.0 3.6 hypothetical protein compare
PFLU_RS24785 +1.0 7.1 outer membrane protein assembly factor BamB compare
PFLU_RS28820 +0.9 2.2 aliphatic sulfonates ABC transporter ATP-binding protein compare
PFLU_RS07520 +0.9 1.8 hypothetical protein compare
PFLU_RS08485 +0.9 1.9 crotonase/enoyl-CoA hydratase family protein compare
PFLU_RS20955 +0.9 1.5 DUF1028 domain-containing protein compare
PFLU_RS19665 +0.9 2.3 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit compare
PFLU_RS00445 +0.9 3.0 hypothetical protein compare
PFLU_RS19745 +0.9 2.7 acetylornithine deacetylase compare
PFLU_RS09720 +0.8 2.1 single-stranded DNA-binding protein compare
PFLU_RS05875 +0.8 2.3 lysozyme compare
PFLU_RS01910 +0.8 1.5 sterol-binding protein compare
PFLU_RS02130 +0.8 2.5 glycosyl transferase compare
PFLU_RS14355 +0.8 2.0 DUF2388 domain-containing protein compare
PFLU_RS11930 +0.8 1.6 biopolymer transporter ExbD compare
PFLU_RS29810 +0.8 5.3 LysR family transcriptional regulator compare
PFLU_RS30985 +0.7 1.9 hypothetical protein compare
PFLU_RS13410 +0.7 5.1 AraC family transcriptional regulator compare
PFLU_RS01285 +0.7 1.3 HAMP domain-containing protein compare
PFLU_RS04075 +0.7 1.7 hypothetical protein compare
PFLU_RS17370 +0.7 2.6 hypothetical protein compare
PFLU_RS30900 +0.7 1.7 hypothetical protein compare
PFLU_RS07250 +0.7 5.1 M48 family metallopeptidase compare
PFLU_RS00460 +0.7 5.2 glutamate/aspartate:proton symporter GltP compare
PFLU_RS05965 +0.7 0.9 hypothetical protein compare
PFLU_RS28895 +0.7 1.6 DUF2388 domain-containing protein compare
PFLU_RS13215 +0.7 2.5 LysR family transcriptional regulator compare
PFLU_RS16935 +0.6 2.0 CoA ester lyase compare
PFLU_RS22665 +0.6 2.3 alanyl-tRNA editing protein compare
PFLU_RS03100 +0.6 1.6 hypothetical protein compare
PFLU_RS20990 +0.6 2.7 zinc-binding dehydrogenase compare
PFLU_RS00195 +0.6 1.3 dodecin domain-containing protein compare
PFLU_RS00065 +0.6 3.4 lysophospholipid acyltransferase compare
PFLU_RS25290 +0.6 2.2 hypothetical protein compare
PFLU_RS13120 +0.6 1.2 hypothetical protein compare
PFLU_RS19855 +0.6 1.9 DUF4398 domain-containing protein compare
PFLU_RS17495 +0.6 1.8 hypothetical protein compare
PFLU_RS09845 +0.6 1.2 biotin carboxyl carrier domain-containing protein compare
PFLU_RS31010 +0.6 1.3 transposase compare
PFLU_RS10090 +0.6 1.6 redox-sensitive transcriptional activator SoxR compare
PFLU_RS17380 +0.6 2.9 DUF924 family protein compare
PFLU_RS11880 +0.6 2.2 general secretion pathway protein GspL compare
PFLU_RS08490 +0.6 1.1 DEAD/DEAH box helicase compare
PFLU_RS05910 +0.6 1.4 response regulator transcription factor compare
PFLU_RS01750 +0.6 2.3 hypothetical protein compare
PFLU_RS17750 +0.5 1.3 pirin family protein compare
PFLU_RS13795 +0.5 1.4 hypothetical protein compare
PFLU_RS23590 +0.5 1.4 gluconokinase compare
PFLU_RS02215 +0.5 1.7 hypothetical protein compare
PFLU_RS00535 +0.5 1.5 DUF1127 domain-containing protein compare
PFLU_RS14265 +0.5 2.6 efflux RND transporter periplasmic adaptor subunit compare
PFLU_RS14335 +0.5 1.5 ABC transporter permease compare
PFLU_RS21795 +0.5 5.0 sigma-54-dependent Fis family transcriptional regulator compare
PFLU_RS01960 +0.5 0.9 ATP-dependent protease ATPase subunit HslU compare
PFLU_RS18700 +0.5 1.0 hypothetical protein compare
PFLU_RS12675 +0.5 2.2 DUF2946 domain-containing protein compare
PFLU_RS31290 +0.5 0.8 EamA family transporter compare
PFLU_RS18680 +0.5 2.6 toxin compare
PFLU_RS18705 +0.5 1.6 hypothetical protein compare
PFLU_RS03995 +0.5 0.8 hypothetical protein compare
PFLU_RS29480 +0.5 4.3 exodeoxyribonuclease III compare
PFLU_RS13065 +0.5 2.5 ser/threonine protein phosphatase compare
PFLU_RS11600 +0.5 2.0 metallophosphoesterase family protein compare
PFLU_RS30440 +0.5 3.1 hypothetical protein compare
PFLU_RS11285 +0.5 2.0 hypothetical protein compare
PFLU_RS31825 +0.5 1.9 hypothetical protein compare
PFLU_RS31415 +0.5 2.0 hypothetical protein compare
PFLU_RS29250 +0.5 2.2 DUF1289 domain-containing protein compare
PFLU_RS10405 +0.5 1.5 helix-turn-helix transcriptional regulator compare
PFLU_RS18910 +0.5 2.2 MarR family transcriptional regulator compare
PFLU_RS12385 +0.5 1.6 methyl-accepting chemotaxis protein compare
PFLU_RS25865 +0.5 1.4 YhbY family RNA-binding protein compare
PFLU_RS30890 +0.5 2.6 hypothetical protein compare
PFLU_RS15310 +0.5 1.2 YgdI/YgdR family lipoprotein compare
PFLU_RS15045 +0.5 2.2 glycosyl hydrolase compare
PFLU_RS28250 +0.5 1.1 malonate decarboxylase holo-ACP synthase compare
PFLU_RS02575 +0.5 3.6 GTPase HflX compare
PFLU_RS14875 +0.5 1.9 hypothetical protein compare
PFLU_RS13365 +0.5 0.6 hypothetical protein compare
PFLU_RS14990 +0.5 1.5 helix-turn-helix transcriptional regulator compare
PFLU_RS21600 +0.5 1.5 response regulator transcription factor compare
PFLU_RS01500 +0.5 1.7 cell division protein FtsQ compare
PFLU_RS11840 +0.5 1.6 RNA polymerase sigma factor compare
PFLU_RS03570 +0.5 1.4 hypothetical protein compare
PFLU_RS08575 +0.4 0.9 hypothetical protein compare
PFLU_RS26800 +0.4 1.9 hypothetical protein compare
PFLU_RS15880 +0.4 2.1 LysR family transcriptional regulator compare
PFLU_RS16805 +0.4 1.8 SDR family oxidoreductase compare
PFLU_RS06570 +0.4 1.2 glycine zipper 2TM domain-containing protein compare
PFLU_RS10980 +0.4 1.7 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
PFLU_RS31830 +0.4 0.4 hypothetical protein compare
PFLU_RS18805 +0.4 1.4 ABC transporter ATP-binding protein compare
PFLU_RS18450 +0.4 2.2 DNA-3-methyladenine glycosylase I compare
PFLU_RS08285 +0.4 1.9 hypothetical protein compare
PFLU_RS23325 +0.4 3.0 GlxA family transcriptional regulator compare
PFLU_RS04655 +0.4 2.4 16S rRNA (cytidine(1402)-2'-O)-methyltransferase compare
PFLU_RS25920 +0.4 0.8 outer membrane protein assembly factor BamE compare
PFLU_RS31805 +0.4 1.3 hypothetical protein compare
PFLU_RS09430 +0.4 2.0 IS66 family insertion sequence element accessory protein TnpB compare
PFLU_RS29975 +0.4 1.1 ATP-binding cassette domain-containing protein compare
PFLU_RS11770 +0.4 1.5 type 1 glutamine amidotransferase domain-containing protein compare
PFLU_RS16290 +0.4 1.8 hypothetical protein compare
PFLU_RS09480 +0.4 1.2 hypothetical protein compare
PFLU_RS29065 +0.4 0.6 amino acid ABC transporter ATP-binding protein compare
PFLU_RS23130 +0.4 2.6 response regulator transcription factor compare
PFLU_RS21060 +0.4 1.8 TetR/AcrR family transcriptional regulator compare
PFLU_RS21905 +0.4 2.1 SelT/SelW/SelH family protein compare
PFLU_RS10955 +0.4 1.9 peptide-methionine (S)-S-oxide reductase MsrA compare
PFLU_RS05105 +0.4 1.7 tetratricopeptide repeat protein compare
PFLU_RS01510 +0.4 2.6 cell division protein FtsQ compare
PFLU_RS16055 +0.4 1.4 GntR family transcriptional regulator compare
PFLU_RS17045 +0.4 1.6 SDR family oxidoreductase compare
PFLU_RS31510 +0.4 1.0 transcriptional regulator compare
PFLU_RS15590 +0.4 1.8 beta-ketoacyl-[acyl-carrier-protein] synthase family protein compare
PFLU_RS01495 +0.4 2.4 SGNH/GDSL hydrolase family protein compare
PFLU_RS31315 +0.4 1.7 hypothetical protein compare
PFLU_RS10975 +0.4 1.8 FAD-binding oxidoreductase compare
PFLU_RS07735 +0.4 1.5 PilZ domain-containing protein compare
PFLU_RS26595 +0.4 1.0 lipoprotein compare
PFLU_RS24535 +0.4 0.9 DUF3509 domain-containing protein compare
PFLU_RS30660 +0.4 1.0 histidine phosphatase family protein compare
PFLU_RS17675 +0.4 1.3 hypothetical protein compare
PFLU_RS06035 +0.4 2.0 purine-binding chemotaxis protein CheW compare
PFLU_RS16190 +0.4 1.4 AraC family transcriptional regulator compare
PFLU_RS06905 +0.4 1.9 LemA family protein compare
PFLU_RS07310 +0.4 2.3 hypothetical protein compare
PFLU_RS04360 +0.4 2.0 class II fumarate hydratase compare
PFLU_RS23895 +0.4 1.1 DUF1289 domain-containing protein compare
PFLU_RS10190 +0.4 1.8 GNAT family N-acetyltransferase compare
PFLU_RS00390 +0.4 1.9 DUF2782 domain-containing protein compare
PFLU_RS14760 +0.4 1.2 SDR family NAD(P)-dependent oxidoreductase compare
PFLU_RS16960 +0.4 1.5 LysR family transcriptional regulator compare
PFLU_RS25000 +0.4 1.6 response regulator compare
PFLU_RS13605 +0.4 1.2 DUF4880 domain-containing protein compare
PFLU_RS00520 +0.4 1.1 DUF2388 domain-containing protein compare
PFLU_RS05225 +0.4 1.5 hypothetical protein compare
PFLU_RS12780 +0.4 2.3 hypothetical protein compare
PFLU_RS18405 +0.4 2.2 DUF2062 domain-containing protein compare
PFLU_RS01875 +0.4 0.5 16S rRNA (uracil(1498)-N(3))-methyltransferase compare
PFLU_RS19790 +0.4 1.8 haloacid dehalogenase type II compare
PFLU_RS10330 +0.4 1.6 adenylyl-sulfate kinase compare
PFLU_RS05020 +0.4 0.8 DUF1120 domain-containing protein compare
PFLU_RS16520 +0.4 1.7 hypothetical protein compare
PFLU_RS10540 +0.4 2.3 TerC family protein compare
PFLU_RS01095 +0.4 1.2 ribbon-helix-helix protein, CopG family compare
PFLU_RS30825 +0.4 1.6 hypothetical protein compare
PFLU_RS11100 +0.4 1.6 integrase compare
PFLU_RS12775 +0.4 1.7 TerC family protein compare
PFLU_RS12520 +0.4 1.6 carboxymuconolactone decarboxylase family protein compare
PFLU_RS21445 +0.4 1.7 RluA family pseudouridine synthase compare
PFLU_RS15005 +0.4 0.7 hypothetical protein compare
PFLU_RS09075 +0.4 1.3 hotdog fold thioesterase compare
PFLU_RS17295 +0.4 1.4 type VI secretion system contractile sheath small subunit compare
PFLU_RS02580 +0.4 2.4 FtsH protease activity modulator HflK compare
PFLU_RS01665 +0.4 1.2 glutaredoxin 3 compare
PFLU_RS31380 +0.4 1.8 hypothetical protein compare
PFLU_RS25095 +0.4 2.4 cytochrome b561 compare
PFLU_RS19520 +0.4 0.9 substrate-binding domain-containing protein compare
PFLU_RS31780 +0.4 1.0 hypothetical protein compare
PFLU_RS04635 +0.3 1.2 BON domain-containing protein compare
PFLU_RS11740 +0.3 2.2 NAD(P)-binding protein compare
PFLU_RS08695 +0.3 1.5 DUF3077 domain-containing protein compare
PFLU_RS16600 +0.3 1.7 VOC family protein compare
PFLU_RS21955 +0.3 1.6 hypothetical protein compare
PFLU_RS23360 +0.3 2.0 DUF2790 domain-containing protein compare
PFLU_RS10915 +0.3 2.7 ABC transporter substrate-binding protein compare
PFLU_RS28845 +0.3 1.6 peroxiredoxin compare
PFLU_RS05040 +0.3 1.5 DUF1120 domain-containing protein compare
PFLU_RS11215 +0.3 1.1 ABC transporter ATP-binding protein compare
PFLU_RS31610 +0.3 1.7 putative transporter-like protein compare
PFLU_RS13710 +0.3 1.5 DUF1294 domain-containing protein compare
PFLU_RS13955 +0.3 1.7 hypothetical protein compare
PFLU_RS31225 +0.3 1.5 membrane protein insertion efficiency factor YidD compare
PFLU_RS00650 +0.3 2.2 ABC transporter permease compare
PFLU_RS21930 +0.3 1.5 DUF454 domain-containing protein compare
PFLU_RS24815 +0.3 2.3 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN compare
PFLU_RS19435 +0.3 2.0 efflux transporter outer membrane subunit compare
PFLU_RS23545 +0.3 1.3 SRPBCC family protein compare
PFLU_RS14125 +0.3 1.3 lysozyme compare
PFLU_RS16710 +0.3 1.0 nitrite reductase small subunit NirD compare
PFLU_RS20970 +0.3 0.3 phytanoyl-CoA dioxygenase family protein compare
PFLU_RS31635 +0.3 1.0 IS21 family transposase compare
PFLU_RS03865 +0.3 1.5 outer membrane protein assembly factor BamD compare
PFLU_RS12170 +0.3 1.7 transcriptional regulator compare
PFLU_RS14110 +0.3 1.7 hypothetical protein compare
PFLU_RS21290 +0.3 1.2 hypothetical protein compare
PFLU_RS19515 +0.3 1.4 sugar ABC transporter ATP-binding protein compare
PFLU_RS04155 +0.3 1.8 alpha/beta fold hydrolase compare
PFLU_RS27580 +0.3 0.8 pyrroloquinoline quinone biosynthesis peptide chaperone PqqD compare
PFLU_RS27700 +0.3 2.0 3'-5' exonuclease compare
PFLU_RS11220 +0.3 1.7 5-dehydro-4-deoxyglucarate dehydratase compare
PFLU_RS11225 +0.3 1.3 5-carboxymethyl-2-hydroxymuconate Delta-isomerase compare
PFLU_RS22875 +0.3 1.4 hypothetical protein compare
PFLU_RS14770 +0.3 1.8 acyl-CoA dehydrogenase compare
PFLU_RS22475 +0.3 2.0 hypothetical protein compare
PFLU_RS02515 +0.3 1.7 flagellar motor protein MotB compare


Specific Phenotypes

For 11 genes in this experiment

For carbon source D-Sorbitol in Pseudomonas fluorescens SBW25-INTG

For carbon source D-Sorbitol across organisms