Experiment set21IT032 for Burkholderia phytofirmans PsJN

200 most important genes:

gene	name	fitness	t score	description
BPHYT_RS17620		-5.2	-11.2	cytochrome C
BPHYT_RS15620		-4.6	-3.2	peptidyl-prolyl cis-trans isomerase
BPHYT_RS28485		-4.5	-1.2	GntR family transcriptional regulator
BPHYT_RS16270		-4.2	-3.5	phosphoglycerate kinase
BPHYT_RS14855		-4.1	-1.8	ADP-L-glycero-D-manno-heptose-6-epimerase
BPHYT_RS33920		-4.1	-6.2	type II citrate synthase
BPHYT_RS13605		-4.1	-1.0	tRNA-Pro
BPHYT_RS33765		-4.0	-1.0	membrane protein
BPHYT_RS24095		-4.0	-4.3	membrane protein
BPHYT_RS04965		-4.0	-8.1	ATP-binding protein
BPHYT_RS17630		-3.9	-7.9	ubiquinol-cytochrome C reductase
BPHYT_RS17625		-3.7	-13.5	cytochrome B
BPHYT_RS17955		-3.5	-6.7	cytochrome C
BPHYT_RS02860		-3.5	-0.9	membrane protein
BPHYT_RS16835		-3.4	-5.7	glyceraldehyde-3-phosphate dehydrogenase
BPHYT_RS06405		-3.3	-5.9	phosphoribosylamine--glycine ligase
BPHYT_RS20245		-3.2	-5.8	iron ABC transporter substrate-binding protein
BPHYT_RS12845		-3.1	-11.7	ATPase
BPHYT_RS17095		-3.0	-2.6	proline--tRNA ligase
BPHYT_RS26840		-3.0	-4.6	NADH dehydrogenase
BPHYT_RS12055		-2.8	-13.8	phosphoenolpyruvate synthase
BPHYT_RS20235		-2.8	-7.2	iron ABC transporter
BPHYT_RS06685		-2.8	-1.4	NADH:ubiquinone oxidoreductase subunit M
BPHYT_RS03480		-2.7	-9.2	ferritin
BPHYT_RS02590		-2.7	-6.1	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
BPHYT_RS01455		-2.7	-1.0	peptide deformylase
BPHYT_RS16255		-2.6	-2.5	phosphoribosylaminoimidazole-succinocarboxamide synthase
BPHYT_RS08850		-2.6	-1.3	transcriptional regulator
BPHYT_RS03640		-2.6	-3.7	phosphoribosylformylglycinamidine cyclo-ligase
BPHYT_RS02525		-2.6	-7.0	membrane protein
BPHYT_RS03725		-2.5	-1.1	serine hydroxymethyltransferase
BPHYT_RS08975		-2.5	-3.4	molybdenum cofactor biosynthesis protein MoaE
BPHYT_RS17520		-2.5	-4.1	N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
BPHYT_RS06530		-2.5	-1.5	membrane protein
BPHYT_RS17945		-2.5	-1.9	cytochrome C biogenesis protein
BPHYT_RS26855		-2.4	-2.8	carboxyvinyl-carboxyphosphonate phosphorylmutase
BPHYT_RS12990		-2.4	-2.1	iron transporter
BPHYT_RS08960		-2.4	-1.4	threonine synthase
BPHYT_RS09515		-2.4	-2.4	phosphoribosylformylglycinamidine synthase
BPHYT_RS16710		-2.4	-0.8	LysR family transcriptional regulator
BPHYT_RS33580		-2.4	-4.3	geranyltranstransferase
BPHYT_RS16340		-2.4	-5.1	succinyl-CoA synthetase subunit alpha
BPHYT_RS04890		-2.4	-1.2	cobalamin biosynthesis protein CobD
BPHYT_RS35720		-2.3	-5.7	phosphopantetheinyl transferase
BPHYT_RS01620		-2.3	-4.1	sensor histidine kinase
BPHYT_RS12465		-2.3	-2.0	inositol monophosphatase
BPHYT_RS16840		-2.3	-1.6	transketolase
BPHYT_RS30750		-2.3	-1.5	GntR family transcriptional regulator
BPHYT_RS30055		-2.3	-2.3	hypothetical protein
BPHYT_RS29855		-2.3	-1.0	protein-tyrosine-phosphatase
BPHYT_RS08965		-2.2	-3.6	molybdenum cofactor biosynthesis protein MoaA
BPHYT_RS33805		-2.2	-1.0	hypothetical protein
BPHYT_RS33655		-2.2	-4.6	MarR family transcriptional regulator
BPHYT_RS02975		-2.2	-2.4	membrane protein
BPHYT_RS15415		-2.2	-8.5	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
BPHYT_RS06600		-2.1	-1.7	polynucleotide phosphorylase/polyadenylase
BPHYT_RS14190		-2.1	-6.1	carbamoyl phosphate synthase large subunit
BPHYT_RS16245		-2.1	-2.9	phosphoribosylaminoimidazole carboxylase
BPHYT_RS03645		-2.1	-1.7	tRNA dimethylallyltransferase
BPHYT_RS06985		-2.1	-5.4	fumarate hydratase
BPHYT_RS11705		-2.0	-1.1	hypothetical protein
BPHYT_RS03400		-2.0	-0.7	ATP-dependent DNA helicase RecG
BPHYT_RS34780		-2.0	-4.0	phytoene synthase
BPHYT_RS15710		-2.0	-1.2	ATP-dependent Clp protease ATP-binding protein
BPHYT_RS33840		-2.0	-5.0	amidophosphoribosyltransferase
BPHYT_RS08340		-2.0	-0.5	chemotaxis protein CheY
BPHYT_RS23875		-1.9	-0.8	sugar ABC transporter ATP-binding protein
BPHYT_RS23265		-1.9	-4.2	methylcrotonoyl-CoA carboxylase
BPHYT_RS19325		-1.9	-2.0	glycine cleavage system H protein
BPHYT_RS04895		-1.9	-3.0	adenosylcobinamide kinase
BPHYT_RS16905		-1.9	-4.3	orotidine 5'-phosphate decarboxylase
BPHYT_RS02865		-1.9	-1.8	hypothetical protein
BPHYT_RS33690		-1.9	-1.4	molybdate ABC transporter permease
BPHYT_RS18255		-1.9	-2.0	phenylacetate-CoA oxygenase subunit PaaB
BPHYT_RS13645		-1.9	-11.3	threonine--tRNA ligase
BPHYT_RS08765		-1.9	-0.8	ABC transporter ATP-binding protein
BPHYT_RS26300		-1.9	-1.4	ATP-dependent DNA ligase
BPHYT_RS30465		-1.9	-1.1	short-chain dehydrogenase
BPHYT_RS06610		-1.9	-0.9	triosephosphate isomerase
BPHYT_RS14195		-1.8	-1.8	carbamoyl phosphate synthase small subunit
BPHYT_RS33630		-1.8	-1.8	chromate transporter
BPHYT_RS18265		-1.8	-2.8	phenylacetate-CoA oxygenase subunit PaaJ
BPHYT_RS04955		-1.8	-1.6	methionyl-tRNA synthetase
BPHYT_RS03090		-1.8	-1.6	hypothetical protein
BPHYT_RS07050		-1.8	-1.3	membrane protein
BPHYT_RS05655		-1.8	-2.4	membrane protein
BPHYT_RS28595		-1.8	-1.1	glyoxalase
BPHYT_RS20180		-1.8	-2.6	sugar ABC transporter substrate-binding protein
BPHYT_RS26820		-1.8	-1.6	LysR family transcriptional regulator
BPHYT_RS17075		-1.7	-2.3	ABC transporter permease
BPHYT_RS06075		-1.7	-5.2	hypothetical protein
BPHYT_RS06350		-1.7	-1.8	chemotaxis protein CheY
BPHYT_RS09480		-1.7	-0.8	peptidyl-prolyl cis-trans isomerase
BPHYT_RS06325		-1.7	-5.2	ATPase
BPHYT_RS16345		-1.7	-2.7	succinyl-CoA ligase [ADP-forming] subunit beta
BPHYT_RS12725		-1.7	-10.8	regulator
BPHYT_RS02365		-1.7	-1.1	hypothetical protein
BPHYT_RS18660		-1.7	-2.4	hypothetical protein
BPHYT_RS14140		-1.7	-2.8	phosphate transporter permease subunit PstC
BPHYT_RS26595		-1.7	-2.5	carbonic anhydrase
BPHYT_RS10355		-1.7	-1.7	nitrate reductase
BPHYT_RS06975		-1.7	-1.6	glutamate racemase
BPHYT_RS19985		-1.7	-0.8	CoA-transferase
BPHYT_RS04370		-1.7	-0.9	glycosyl transferase
BPHYT_RS28575		-1.7	-0.9	transcriptional regulator
BPHYT_RS33645		-1.6	-5.4	homoserine kinase
BPHYT_RS28365		-1.6	-1.2	Germin subfamily 1 member 15
BPHYT_RS03280		-1.6	-1.1	mannose-1-phosphate guanylyltransferase
BPHYT_RS02610		-1.6	-3.3	glycerol-3-phosphate dehydrogenase [NAD(P)+]
BPHYT_RS05155		-1.6	-3.8	acetyltransferase GCN5
BPHYT_RS28470		-1.6	-1.0	hypothetical protein
BPHYT_RS31400		-1.6	-0.9	methyl-accepting chemotaxis protein
BPHYT_RS33150		-1.6	-0.8	beta-lactamase
BPHYT_RS09330		-1.6	-7.4	phytoene synthase
BPHYT_RS10830		-1.6	-1.4	carbon monoxide dehydrogenase
BPHYT_RS22295		-1.5	-1.0	LysR family transcriptional regulator
BPHYT_RS16320		-1.5	-2.7	cyclic pyranopterin monophosphate synthase accessory protein
BPHYT_RS03570		-1.5	-4.2	heat-inducible transcription repressor HrcA
BPHYT_RS18270		-1.5	-5.2	phenylacetic acid degradation protein
BPHYT_RS09825		-1.5	-1.3	Fe-S protein
BPHYT_RS14715		-1.5	-5.8	molybdenum cofactor biosynthesis protein MogA
BPHYT_RS14755		-1.5	-2.4	tRNA (guanine-N(1)-)-methyltransferase
BPHYT_RS00115		-1.5	-1.3	acetaldehyde dehydrogenase
BPHYT_RS23275		-1.5	-2.1	3-methylcrotonyl-CoA carboxylase subunit alpha
BPHYT_RS23520		-1.5	-1.6	peroxidase
BPHYT_RS33515		-1.5	-6.7	porin
BPHYT_RS36150		-1.4	-1.8	hypothetical protein
BPHYT_RS10945		-1.4	-1.2	2-deoxy-D-gluconate 3-dehydrogenase
BPHYT_RS11235		-1.4	-0.7	hypothetical protein
BPHYT_RS34745		-1.4	-1.0	hypothetical protein
BPHYT_RS09385		-1.4	-0.8	FAD-dependent oxidoreductase
BPHYT_RS20155		-1.4	-0.9	hypothetical protein
BPHYT_RS25870		-1.4	-0.7	type III secretion system ATPase
BPHYT_RS16470		-1.4	-3.0	DeoR faimly transcriptional regulator
BPHYT_RS14670		-1.4	-1.0	hypothetical protein
BPHYT_RS14865		-1.4	-1.4	UDP-glucose 6-dehydrogenase
BPHYT_RS04455		-1.4	-0.9	glycosyl transferase
BPHYT_RS27295		-1.4	-1.3	hypothetical protein
BPHYT_RS15290		-1.4	-1.7	tRNA-Arg
BPHYT_RS34655		-1.4	-1.3	2-amino-3-ketobutyrate CoA ligase
BPHYT_RS11745		-1.4	-1.0	(2Fe-2S)-binding protein
BPHYT_RS21685		-1.3	-2.0	cobalamin biosynthesis protein CobS
BPHYT_RS32260		-1.3	-1.3	hypothetical protein
BPHYT_RS30610		-1.3	-1.7	major facilitator transporter
BPHYT_RS18250		-1.3	-4.1	phenylacetate-CoA oxygenase subunit PaaA
BPHYT_RS34240		-1.3	-2.4	ABC transporter for L-rhamnose/L-fucose/xylitol, permease component (from data)
BPHYT_RS35885		-1.3	-3.1	hypothetical protein
BPHYT_RS11825		-1.3	-0.9	cytosine deaminase
BPHYT_RS16175		-1.3	-1.2	hemolysin D
BPHYT_RS08125		-1.3	-6.1	ATPase
BPHYT_RS11285		-1.3	-1.9	LacI family transcription regulator
BPHYT_RS32860		-1.3	-0.8	hypothetical protein
BPHYT_RS08235		-1.3	-0.6	nucleoprotein, Hfg, host factor I
BPHYT_RS06375		-1.3	-2.5	ribonuclease
BPHYT_RS14485		-1.3	-2.1	ribonuclease E
BPHYT_RS08410		-1.3	-0.8	dehydrogenase
BPHYT_RS17530		-1.3	-2.4	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
BPHYT_RS04220		-1.3	-2.8	hypothetical protein
BPHYT_RS12840		-1.2	-2.4	pyruvate dehydrogenase
BPHYT_RS09765		-1.2	-1.6	G-D-S-L family lipolytic protein
BPHYT_RS23525		-1.2	-0.9	hypothetical protein
BPHYT_RS21485		-1.2	-0.8	hypothetical protein
BPHYT_RS33060		-1.2	-1.0	hypothetical protein
BPHYT_RS31260		-1.2	-1.1	histidine kinase
BPHYT_RS33535		-1.2	-8.5	RNA polymerase sigma factor RpoD
BPHYT_RS05905		-1.2	-0.7	hypothetical protein
BPHYT_RS30065		-1.2	-1.4	shikimate dehydrogenase
BPHYT_RS11125		-1.2	-0.9	alkylhydroperoxidase
BPHYT_RS09620		-1.2	-1.4	aminodeoxychorismate lyase
BPHYT_RS15045		-1.2	-4.1	peptidase C26
BPHYT_RS33685		-1.2	-4.2	molybdate ABC transporter substrate-binding protein
BPHYT_RS09690		-1.2	-0.9	phosphate starvation-inducible protein PsiF
BPHYT_RS32985		-1.2	-2.5	hypothetical protein
BPHYT_RS18260		-1.2	-4.7	phenylacetic acid degradation protein
BPHYT_RS07660		-1.2	-1.5	sulfonate ABC transporter substrate-binding protein
BPHYT_RS33695		-1.2	-2.8	molybdenum ABC transporter ATPase
BPHYT_RS01530		-1.2	-1.7	penicillin-binding protein 2
BPHYT_RS24565		-1.2	-1.8	membrane protein
BPHYT_RS26555		-1.2	-2.4	multidrug MFS transporter
BPHYT_RS23350		-1.2	-1.3	NAD-dependent epimerase/dehydratase
BPHYT_RS04255		-1.2	-1.4	diadenosine tetraphosphatase
BPHYT_RS16215		-1.2	-1.8	sensor histidine kinase
BPHYT_RS25575		-1.2	-0.8	alpha/beta hydrolase
BPHYT_RS25270		-1.2	-1.8	multidrug MFS transporter
BPHYT_RS10120		-1.1	-2.2	membrane protein
BPHYT_RS21715		-1.1	-1.3	taurine ABC transporter permease
BPHYT_RS36365		-1.1	-1.5	hypothetical protein
BPHYT_RS18630		-1.1	-2.4	allophanate hydrolase
BPHYT_RS13460		-1.1	-2.1	chemotaxis protein
BPHYT_RS05355		-1.1	-1.3	Crp/Fnr family transcriptional regulator
BPHYT_RS24630		-1.1	-1.1	(2Fe-2S)-binding protein
BPHYT_RS33950		-1.1	-5.5	GntR family transcriptional regulator
BPHYT_RS33885		-1.1	-6.8	tRNA pseudouridine synthase A
BPHYT_RS32335		-1.1	-1.5	AsnC family transcriptional regulator
BPHYT_RS14145		-1.1	-5.2	phosphate ABC transporter substrate-binding protein
BPHYT_RS12150		-1.1	-5.5	PII uridylyl-transferase
BPHYT_RS28660		-1.1	-0.9	polyvinylalcohol dehydrogenase
BPHYT_RS14495		-1.1	-3.9	molybdopterin-guanine dinucleotide biosynthesis protein A
BPHYT_RS04335		-1.1	-1.0	membrane protein
BPHYT_RS10320		-1.1	-3.2	hypothetical protein

Specific Phenotypes

For 2 genes in this experiment