Experiment set21IT031 for Burkholderia phytofirmans PsJN

Compare to:

Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant

200 most important genes:

  gene name fitness t score description  
BPHYT_RS14865 -5.2 -2.0 UDP-glucose 6-dehydrogenase compare
BPHYT_RS21025 -4.7 -1.0 cation-binding protein compare
BPHYT_RS16345 -4.7 -3.0 succinyl-CoA ligase [ADP-forming] subunit beta compare
BPHYT_RS21625 -4.6 -1.0 LysR family transcriptional regulator compare
BPHYT_RS04370 -4.6 -1.0 glycosyl transferase compare
BPHYT_RS08525 -4.5 -1.0 SAM-dependent methyltransferase compare
BPHYT_RS05650 -4.5 -1.7 hypothetical protein compare
BPHYT_RS09385 -4.5 -1.0 FAD-dependent oxidoreductase compare
BPHYT_RS28535 -4.4 -1.0 response regulator receiver compare
BPHYT_RS04335 -4.3 -1.6 membrane protein compare
BPHYT_RS34295 -4.2 -0.9 fimbrial protein compare
BPHYT_RS27495 -4.2 -0.9 hypothetical protein compare
BPHYT_RS17630 -4.2 -6.2 ubiquinol-cytochrome C reductase compare
BPHYT_RS16270 -4.1 -2.7 phosphoglycerate kinase compare
BPHYT_RS15075 -4.1 -1.6 dihydrokaempferol 4-reductase compare
BPHYT_RS33150 -4.1 -0.9 beta-lactamase compare
BPHYT_RS24095 -4.1 -3.0 membrane protein compare
BPHYT_RS17625 -4.1 -11.5 cytochrome B compare
BPHYT_RS14195 -4.0 -1.9 carbamoyl phosphate synthase small subunit compare
BPHYT_RS16710 -3.9 -0.9 LysR family transcriptional regulator compare
BPHYT_RS02005 -3.8 -1.9 diguanylate phosphodiesterase compare
BPHYT_RS12615 -3.8 -1.2 dihydrodipicolinate synthase compare
BPHYT_RS15620 -3.7 -3.4 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS33920 -3.7 -7.0 type II citrate synthase compare
BPHYT_RS17955 -3.6 -5.0 cytochrome C compare
BPHYT_RS04965 -3.6 -6.1 ATP-binding protein compare
BPHYT_RS12465 -3.5 -1.5 inositol monophosphatase compare
BPHYT_RS02860 -3.5 -0.8 membrane protein compare
BPHYT_RS20245 -3.5 -5.2 iron ABC transporter substrate-binding protein compare
BPHYT_RS02010 -3.4 -2.0 copper homeostasis protein CutC compare
BPHYT_RS35675 -3.3 -1.7 short-chain dehydrogenase compare
BPHYT_RS05320 -3.3 -1.0 beta-lactamase compare
BPHYT_RS03480 -3.2 -7.0 ferritin compare
BPHYT_RS17905 -3.2 -2.6 fimbrial assembly family protein compare
BPHYT_RS05290 -3.1 -1.0 hypothetical protein compare
BPHYT_RS02590 -3.1 -6.9 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
BPHYT_RS17530 -3.0 -3.4 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BPHYT_RS20235 -2.9 -2.8 iron ABC transporter compare
BPHYT_RS17620 -2.9 -3.6 cytochrome C compare
BPHYT_RS18655 -2.9 -3.1 3-oxoacyl-ACP synthase compare
BPHYT_RS15710 -2.9 -1.1 ATP-dependent Clp protease ATP-binding protein compare
BPHYT_RS16340 -2.8 -5.0 succinyl-CoA synthetase subunit alpha compare
BPHYT_RS12925 -2.8 -0.9 exodeoxyribonuclease III compare
BPHYT_RS07050 -2.8 -1.1 membrane protein compare
BPHYT_RS36090 -2.7 -1.8 hypothetical protein compare
BPHYT_RS10095 -2.7 -1.4 integrase compare
BPHYT_RS16255 -2.7 -3.7 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
BPHYT_RS12845 -2.7 -9.7 ATPase compare
BPHYT_RS35750 -2.7 -1.2 hypothetical protein compare
BPHYT_RS08965 -2.7 -3.2 molybdenum cofactor biosynthesis protein MoaA compare
BPHYT_RS12590 -2.6 -1.4 dual-specificity RNA methyltransferase RlmN compare
BPHYT_RS17890 -2.6 -1.0 shikimate kinase compare
BPHYT_RS03645 -2.6 -1.8 tRNA dimethylallyltransferase compare
BPHYT_RS01620 -2.6 -4.9 sensor histidine kinase compare
BPHYT_RS03830 -2.5 -1.8 hypothetical protein compare
BPHYT_RS17520 -2.5 -4.8 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase compare
BPHYT_RS36365 -2.5 -1.7 hypothetical protein compare
BPHYT_RS28065 -2.5 -1.3 hypothetical protein compare
BPHYT_RS08960 -2.5 -1.2 threonine synthase compare
BPHYT_RS17945 -2.4 -1.7 cytochrome C biogenesis protein compare
BPHYT_RS17240 -2.4 -0.9 cell division protein FtsW compare
BPHYT_RS17095 -2.4 -2.1 proline--tRNA ligase compare
BPHYT_RS14190 -2.4 -5.3 carbamoyl phosphate synthase large subunit compare
BPHYT_RS28300 -2.4 -1.2 histone nucleoid-structuring protein H-NS compare
BPHYT_RS11040 -2.4 -1.0 GntR family transcriptional regulator compare
BPHYT_RS32360 -2.4 -1.2 spermidine/putrescine ABC transporter ATPase compare
BPHYT_RS22870 -2.4 -1.5 copper transporter compare
BPHYT_RS24315 -2.3 -1.6 phosphoribosyltransferase compare
BPHYT_RS34780 -2.3 -3.3 phytoene synthase compare
BPHYT_RS33610 -2.3 -1.0 DNA polymerase I compare
BPHYT_RS33580 -2.3 -2.5 geranyltranstransferase compare
BPHYT_RS31400 -2.2 -1.0 methyl-accepting chemotaxis protein compare
BPHYT_RS12055 -2.2 -11.4 phosphoenolpyruvate synthase compare
BPHYT_RS15415 -2.2 -7.4 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BPHYT_RS06075 -2.2 -3.8 hypothetical protein compare
BPHYT_RS02525 -2.2 -5.0 membrane protein compare
BPHYT_RS09825 -2.1 -1.2 Fe-S protein compare
BPHYT_RS10945 -2.1 -1.4 2-deoxy-D-gluconate 3-dehydrogenase compare
BPHYT_RS02130 -2.1 -2.5 hydroxymethylglutaryl-CoA lyase compare
BPHYT_RS33845 -2.1 -2.6 bacteriocin production protein compare
BPHYT_RS18415 -2.1 -2.3 hypothetical protein compare
BPHYT_RS35400 -2.1 -1.9 ABC transporter compare
BPHYT_RS04920 -2.1 -2.2 aspartate 1-decarboxylase compare
BPHYT_RS09515 -2.1 -2.9 phosphoribosylformylglycinamidine synthase compare
BPHYT_RS03400 -2.0 -0.6 ATP-dependent DNA helicase RecG compare
BPHYT_RS36385 -2.0 -0.8 TetR family transcriptional regulator compare
BPHYT_RS27295 -2.0 -1.4 hypothetical protein compare
BPHYT_RS26820 -2.0 -1.5 LysR family transcriptional regulator compare
BPHYT_RS03110 -2.0 -1.7 MarR family transcriptional regulator compare
BPHYT_RS01455 -2.0 -0.7 peptide deformylase compare
BPHYT_RS35720 -2.0 -4.4 phosphopantetheinyl transferase compare
BPHYT_RS14855 -2.0 -1.2 ADP-L-glycero-D-manno-heptose-6-epimerase compare
BPHYT_RS16835 -2.0 -3.9 glyceraldehyde-3-phosphate dehydrogenase compare
BPHYT_RS14140 -2.0 -3.1 phosphate transporter permease subunit PstC compare
BPHYT_RS06985 -2.0 -5.4 fumarate hydratase compare
BPHYT_RS09565 -2.0 -1.2 acetyl-CoA acetyltransferase compare
BPHYT_RS21035 -1.9 -2.1 ABC transporter permease compare
BPHYT_RS27920 -1.9 -0.9 tricarballylate utilization protein B compare
BPHYT_RS06175 -1.9 -4.5 LPS biosynthesis compare
BPHYT_RS18265 -1.9 -2.0 phenylacetate-CoA oxygenase subunit PaaJ compare
BPHYT_RS23230 -1.9 -0.6 histidine kinase compare
BPHYT_RS25140 -1.9 -2.5 hypothetical protein compare
BPHYT_RS31255 -1.9 -0.9 cytochrome B561 compare
BPHYT_RS06410 -1.8 -1.4 transcriptional regulator compare
BPHYT_RS02975 -1.8 -1.7 membrane protein compare
BPHYT_RS09585 -1.8 -1.0 hypothetical protein compare
BPHYT_RS14245 -1.8 -1.2 membrane protein compare
BPHYT_RS10135 -1.8 -0.8 hypothetical protein compare
BPHYT_RS18260 -1.8 -4.8 phenylacetic acid degradation protein compare
BPHYT_RS17440 -1.8 -2.7 hypothetical protein compare
BPHYT_RS23265 -1.8 -2.1 methylcrotonoyl-CoA carboxylase compare
BPHYT_RS25160 -1.8 -2.7 NAD/NADP-dependent betaine aldehyde dehydrogenase compare
BPHYT_RS06600 -1.8 -1.4 polynucleotide phosphorylase/polyadenylase compare
BPHYT_RS34815 -1.8 -1.6 ABC transporter compare
BPHYT_RS29320 -1.8 -1.2 histidine kinase compare
BPHYT_RS30415 -1.8 -1.3 AraC family transcriptional regulator compare
BPHYT_RS30055 -1.8 -1.4 hypothetical protein compare
BPHYT_RS06105 -1.8 -1.1 hypothetical protein compare
BPHYT_RS30465 -1.8 -0.9 short-chain dehydrogenase compare
BPHYT_RS12550 -1.8 -0.8 GTP-binding protein HflX compare
BPHYT_RS31950 -1.8 -1.2 short-chain dehydrogenase compare
BPHYT_RS06900 -1.8 -4.2 aspartate aminotransferase compare
BPHYT_RS26840 -1.8 -2.3 NADH dehydrogenase compare
BPHYT_RS25875 -1.8 -0.9 type III secretion protein compare
BPHYT_RS27395 -1.7 -1.3 N-acetyltransferase GCN5 compare
BPHYT_RS20155 -1.7 -1.0 hypothetical protein compare
BPHYT_RS33125 -1.7 -1.5 hypothetical protein compare
BPHYT_RS18320 -1.7 -4.5 orotate phosphoribosyltransferase compare
BPHYT_RS13465 -1.7 -2.3 hypothetical protein compare
BPHYT_RS20515 -1.7 -1.6 alpha/beta hydrolase compare
BPHYT_RS01630 -1.7 -1.4 ATP-dependent protease ATPase subunit HslU compare
BPHYT_RS02710 -1.7 -0.8 hypothetical protein compare
BPHYT_RS32155 -1.7 -2.8 type IV secretion system protein VirB11 compare
BPHYT_RS12785 -1.7 -1.7 Rrf2 family transcriptional regulator compare
BPHYT_RS09980 -1.7 -0.9 TetR family transcriptional regulator compare
BPHYT_RS03640 -1.7 -2.0 phosphoribosylformylglycinamidine cyclo-ligase compare
BPHYT_RS09330 -1.6 -5.6 phytoene synthase compare
BPHYT_RS26490 -1.6 -0.8 hypothetical protein compare
BPHYT_RS23030 -1.6 -1.0 gluconate 2-dehydrogenase compare
BPHYT_RS06405 -1.6 -3.2 phosphoribosylamine--glycine ligase compare
BPHYT_RS08125 -1.6 -5.4 ATPase compare
BPHYT_RS07960 -1.6 -1.1 hypothetical protein compare
BPHYT_RS33645 -1.6 -4.3 homoserine kinase compare
BPHYT_RS03900 -1.6 -0.7 phospholipid-binding protein compare
BPHYT_RS23675 -1.6 -1.2 lysine transporter LysE compare
BPHYT_RS26435 -1.6 -0.9 hypothetical protein compare
BPHYT_RS01485 -1.6 -0.7 histidine kinase compare
BPHYT_RS36215 -1.6 -2.8 hypothetical protein compare
BPHYT_RS16020 -1.5 -1.9 AsnC family transcriptional regulator compare
BPHYT_RS17100 -1.5 -2.7 RNA pyrophosphohydrolase compare
BPHYT_RS16245 -1.5 -3.0 phosphoribosylaminoimidazole carboxylase compare
BPHYT_RS13645 -1.5 -9.3 threonine--tRNA ligase compare
BPHYT_RS05155 -1.5 -2.7 acetyltransferase GCN5 compare
BPHYT_RS11980 -1.5 -2.1 LysR family transcriptional regulator compare
BPHYT_RS12725 -1.5 -7.4 regulator compare
BPHYT_RS18910 -1.5 -0.9 FlgN compare
BPHYT_RS28480 -1.5 -1.5 hydroxyglutarate oxidase compare
BPHYT_RS28485 -1.5 -0.7 GntR family transcriptional regulator compare
BPHYT_RS10750 -1.5 -0.8 LysR family transcriptional regulator compare
BPHYT_RS08975 -1.5 -2.9 molybdenum cofactor biosynthesis protein MoaE compare
BPHYT_RS30340 -1.5 -1.0 AraC family transcriptional regulator compare
BPHYT_RS27890 -1.5 -0.7 hypothetical protein compare
BPHYT_RS25970 -1.5 -0.6 urea amidolyase compare
BPHYT_RS06320 -1.5 -1.6 chemotaxis protein CheY compare
BPHYT_RS29185 -1.4 -1.1 sugar ABC transporter permease compare
BPHYT_RS18270 -1.4 -4.1 phenylacetic acid degradation protein compare
BPHYT_RS31505 -1.4 -2.1 hypothetical protein compare
BPHYT_RS11955 -1.4 -1.6 hemolysin D compare
BPHYT_RS28900 -1.4 -2.1 2-oxo-hepta-3-ene-1,7-dioic acid hydratase compare
BPHYT_RS22320 -1.4 -2.0 hypothetical protein compare
BPHYT_RS00980 -1.4 -0.7 GCN5 family acetyltransferase compare
BPHYT_RS20665 -1.4 -0.7 LysR family transcriptional regulator compare
BPHYT_RS28690 -1.4 -1.5 diguanylate phosphodiesterase compare
BPHYT_RS14370 -1.4 -1.7 ribonuclease III compare
BPHYT_RS06190 -1.4 -2.2 heptosyltransferase compare
BPHYT_RS17725 -1.4 -2.6 BolA family transcriptional regulator compare
BPHYT_RS36355 -1.4 -1.6 hypothetical protein compare
BPHYT_RS20225 -1.4 -2.4 taurine catabolism dioxygenase tauD/tfdA compare
BPHYT_RS24665 -1.4 -1.1 ABC transporter permease compare
BPHYT_RS04720 -1.4 -4.1 transcriptional regulator compare
BPHYT_RS21855 -1.4 -2.5 hypothetical protein compare
BPHYT_RS04095 -1.4 -0.8 SAM-dependent methyltransferase PhcB compare
BPHYT_RS12840 -1.4 -2.4 pyruvate dehydrogenase compare
BPHYT_RS11745 -1.4 -0.9 (2Fe-2S)-binding protein compare
BPHYT_RS07145 -1.4 -0.9 DNA-binding protein compare
BPHYT_RS15920 -1.4 -4.7 argininosuccinate synthase compare
BPHYT_RS12990 -1.4 -1.4 iron transporter compare
BPHYT_RS32260 -1.4 -1.1 hypothetical protein compare
BPHYT_RS33990 -1.4 -0.6 ATPase compare
BPHYT_RS29085 -1.4 -1.1 LysR family transcriptional regulator compare
BPHYT_RS34625 -1.4 -1.9 hypothetical protein compare
BPHYT_RS29950 -1.4 -1.0 hypothetical protein compare
BPHYT_RS24350 -1.3 -1.5 hypothetical protein compare
BPHYT_RS27905 -1.3 -2.7 MFS transporter compare
BPHYT_RS23650 -1.3 -0.6 hypothetical protein compare
BPHYT_RS26825 -1.3 -1.6 quercetin 2,3-dioxygenase compare
BPHYT_RS00115 -1.3 -1.3 acetaldehyde dehydrogenase compare
BPHYT_RS30860 -1.3 -1.1 sugar ABC transporter permease compare
BPHYT_RS30010 -1.3 -0.9 cell division protein compare
BPHYT_RS08840 -1.3 -2.4 LysR family transcriptional regulator compare


Specific Phenotypes

For 1 genes in this experiment