Experiment set21IT029 for Burkholderia phytofirmans PsJN

Compare to:

Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant

200 most important genes:

  gene name fitness t score description  
BPHYT_RS16270 -5.2 -3.6 phosphoglycerate kinase compare
BPHYT_RS17620 -4.6 -10.6 cytochrome C compare
BPHYT_RS17630 -4.2 -7.9 ubiquinol-cytochrome C reductase compare
BPHYT_RS27295 -4.1 -1.5 hypothetical protein compare
BPHYT_RS26840 -4.1 -6.6 NADH dehydrogenase compare
BPHYT_RS14195 -4.0 -2.3 carbamoyl phosphate synthase small subunit compare
BPHYT_RS17625 -4.0 -12.8 cytochrome B compare
BPHYT_RS16710 -4.0 -1.0 LysR family transcriptional regulator compare
BPHYT_RS09620 -3.8 -3.0 aminodeoxychorismate lyase compare
BPHYT_RS20235 -3.8 -6.5 iron ABC transporter compare
BPHYT_RS04965 -3.6 -5.9 ATP-binding protein compare
BPHYT_RS02860 -3.6 -0.9 membrane protein compare
BPHYT_RS15620 -3.4 -4.2 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS08410 -3.4 -1.2 dehydrogenase compare
BPHYT_RS14865 -3.4 -2.2 UDP-glucose 6-dehydrogenase compare
BPHYT_RS05320 -3.4 -1.2 beta-lactamase compare
BPHYT_RS06600 -3.3 -1.9 polynucleotide phosphorylase/polyadenylase compare
BPHYT_RS18590 -3.2 -0.8 hypothetical protein compare
BPHYT_RS12465 -3.2 -2.3 inositol monophosphatase compare
BPHYT_RS17520 -3.1 -4.6 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase compare
BPHYT_RS16255 -3.0 -2.9 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
BPHYT_RS27175 -3.0 -1.1 DNA-binding protein compare
BPHYT_RS15710 -3.0 -1.3 ATP-dependent Clp protease ATP-binding protein compare
BPHYT_RS17955 -2.9 -5.0 cytochrome C compare
BPHYT_RS03480 -2.9 -6.2 ferritin compare
BPHYT_RS06190 -2.8 -4.0 heptosyltransferase compare
BPHYT_RS12845 -2.8 -13.8 ATPase compare
BPHYT_RS33150 -2.8 -1.0 beta-lactamase compare
BPHYT_RS05515 -2.8 -2.4 hypothetical protein compare
BPHYT_RS08850 -2.7 -1.4 transcriptional regulator compare
BPHYT_RS17890 -2.7 -1.2 shikimate kinase compare
BPHYT_RS16835 -2.7 -4.4 glyceraldehyde-3-phosphate dehydrogenase compare
BPHYT_RS12055 -2.7 -14.1 phosphoenolpyruvate synthase compare
BPHYT_RS14190 -2.6 -7.5 carbamoyl phosphate synthase large subunit compare
BPHYT_RS04370 -2.6 -1.2 glycosyl transferase compare
BPHYT_RS30810 -2.6 -1.8 transcriptional regulator compare
BPHYT_RS17265 -2.6 -1.1 cell division protein compare
BPHYT_RS18340 -2.6 -1.3 n-acetyl-gamma-glutamyl-phosphate reductase compare
BPHYT_RS06975 -2.6 -1.7 glutamate racemase compare
BPHYT_RS16905 -2.6 -5.6 orotidine 5'-phosphate decarboxylase compare
BPHYT_RS15415 -2.6 -10.4 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BPHYT_RS03280 -2.6 -1.2 mannose-1-phosphate guanylyltransferase compare
BPHYT_RS33920 -2.5 -6.5 type II citrate synthase compare
BPHYT_RS08965 -2.5 -3.1 molybdenum cofactor biosynthesis protein MoaA compare
BPHYT_RS16340 -2.5 -5.1 succinyl-CoA synthetase subunit alpha compare
BPHYT_RS03640 -2.5 -3.4 phosphoribosylformylglycinamidine cyclo-ligase compare
BPHYT_RS06405 -2.4 -5.1 phosphoribosylamine--glycine ligase compare
BPHYT_RS16840 -2.4 -1.6 transketolase compare
BPHYT_RS16345 -2.4 -3.5 succinyl-CoA ligase [ADP-forming] subunit beta compare
BPHYT_RS35720 -2.4 -4.1 phosphopantetheinyl transferase compare
BPHYT_RS10135 -2.4 -1.0 hypothetical protein compare
BPHYT_RS23270 -2.4 -0.8 enoyl-CoA hydratase compare
BPHYT_RS12615 -2.3 -1.3 dihydrodipicolinate synthase compare
BPHYT_RS24095 -2.3 -3.4 membrane protein compare
BPHYT_RS01620 -2.3 -6.1 sensor histidine kinase compare
BPHYT_RS22910 -2.2 -1.0 hypothetical protein compare
BPHYT_RS06685 -2.2 -1.6 NADH:ubiquinone oxidoreductase subunit M compare
BPHYT_RS06530 -2.2 -1.6 membrane protein compare
BPHYT_RS33580 -2.2 -4.3 geranyltranstransferase compare
BPHYT_RS19985 -2.2 -1.0 CoA-transferase compare
BPHYT_RS20245 -2.1 -4.8 iron ABC transporter substrate-binding protein compare
BPHYT_RS16175 -2.1 -1.7 hemolysin D compare
BPHYT_RS08975 -2.1 -2.8 molybdenum cofactor biosynthesis protein MoaE compare
BPHYT_RS02865 -2.1 -1.9 hypothetical protein compare
BPHYT_RS12280 -2.1 -1.2 RNA helicase compare
BPHYT_RS02590 -2.0 -4.1 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
BPHYT_RS33695 -2.0 -3.2 molybdenum ABC transporter ATPase compare
BPHYT_RS12985 -2.0 -1.4 amino acid acetyltransferase compare
BPHYT_RS35885 -2.0 -4.2 hypothetical protein compare
BPHYT_RS03725 -2.0 -1.2 serine hydroxymethyltransferase compare
BPHYT_RS08765 -2.0 -0.9 ABC transporter ATP-binding protein compare
BPHYT_RS06550 -2.0 -1.6 acetolactate synthase compare
BPHYT_RS24500 -2.0 -1.4 histidine kinase compare
BPHYT_RS28705 -1.9 -1.1 IclR family transcriptional regulator compare
BPHYT_RS03410 -1.9 -2.0 queuine tRNA-ribosyltransferase compare
BPHYT_RS16880 -1.9 -1.3 malic enzyme compare
BPHYT_RS18320 -1.9 -6.0 orotate phosphoribosyltransferase compare
BPHYT_RS25950 -1.9 -2.2 sensor histidine kinase compare
BPHYT_RS17525 -1.9 -1.8 glutaredoxin compare
BPHYT_RS09515 -1.9 -2.5 phosphoribosylformylglycinamidine synthase compare
BPHYT_RS32475 -1.9 -1.6 dihydroxyacetone kinase compare
BPHYT_RS08235 -1.8 -0.8 nucleoprotein, Hfg, host factor I compare
BPHYT_RS21470 -1.8 -1.3 6-hydroxynicotinate reductase compare
BPHYT_RS09330 -1.8 -8.8 phytoene synthase compare
BPHYT_RS11745 -1.8 -1.2 (2Fe-2S)-binding protein compare
BPHYT_RS29800 -1.8 -1.7 hypothetical protein compare
BPHYT_RS03645 -1.8 -1.5 tRNA dimethylallyltransferase compare
BPHYT_RS07570 -1.8 -0.9 hypothetical protein compare
BPHYT_RS02525 -1.8 -4.9 membrane protein compare
BPHYT_RS18260 -1.8 -7.0 phenylacetic acid degradation protein compare
BPHYT_RS11555 -1.8 -2.3 allantoinase compare
BPHYT_RS17035 -1.7 -2.1 sugar kinase compare
BPHYT_RS18270 -1.7 -6.0 phenylacetic acid degradation protein compare
BPHYT_RS06985 -1.7 -3.1 fumarate hydratase compare
BPHYT_RS31815 -1.7 -2.9 hypothetical protein compare
BPHYT_RS06410 -1.7 -2.1 transcriptional regulator compare
BPHYT_RS18265 -1.7 -2.4 phenylacetate-CoA oxygenase subunit PaaJ compare
BPHYT_RS31050 -1.7 -0.8 epimerase compare
BPHYT_RS07050 -1.7 -1.5 membrane protein compare
BPHYT_RS33685 -1.7 -5.3 molybdate ABC transporter substrate-binding protein compare
BPHYT_RS13645 -1.7 -10.1 threonine--tRNA ligase compare
BPHYT_RS14490 -1.6 -7.8 molybdenum cofactor biosynthesis protein MoeA compare
BPHYT_RS14715 -1.6 -6.5 molybdenum cofactor biosynthesis protein MogA compare
BPHYT_RS29320 -1.6 -1.4 histidine kinase compare
BPHYT_RS28600 -1.6 -1.4 ArsC family transcriptional regulator compare
BPHYT_RS12725 -1.6 -9.7 regulator compare
BPHYT_RS14245 -1.6 -1.4 membrane protein compare
BPHYT_RS33645 -1.6 -5.8 homoserine kinase compare
BPHYT_RS08960 -1.6 -1.1 threonine synthase compare
BPHYT_RS12590 -1.6 -1.7 dual-specificity RNA methyltransferase RlmN compare
BPHYT_RS31320 -1.6 -1.4 hypothetical protein compare
BPHYT_RS15075 -1.6 -1.1 dihydrokaempferol 4-reductase compare
BPHYT_RS18965 -1.6 -1.4 chemotaxis protein CheY compare
BPHYT_RS02570 -1.6 -2.1 phosphocarrier protein HPr compare
BPHYT_RS33965 -1.6 -1.5 methylcitrate synthase compare
BPHYT_RS18250 -1.6 -4.3 phenylacetate-CoA oxygenase subunit PaaA compare
BPHYT_RS28860 -1.5 -0.9 haloacid dehalogenase compare
BPHYT_RS06710 -1.5 -1.0 hypothetical protein compare
BPHYT_RS29520 -1.5 -0.8 hypothetical protein compare
BPHYT_RS11040 -1.5 -1.0 GntR family transcriptional regulator compare
BPHYT_RS06075 -1.5 -3.6 hypothetical protein compare
BPHYT_RS20070 -1.5 -1.4 hypothetical protein compare
BPHYT_RS10095 -1.5 -1.4 integrase compare
BPHYT_RS18705 -1.5 -1.2 5,10-methylenetetrahydrofolate reductase compare
BPHYT_RS04895 -1.5 -1.7 adenosylcobinamide kinase compare
BPHYT_RS33515 -1.5 -6.4 porin compare
BPHYT_RS33840 -1.5 -4.9 amidophosphoribosyltransferase compare
BPHYT_RS20900 -1.5 -1.8 phytanoyl-CoA dioxygenase compare
BPHYT_RS34815 -1.5 -1.7 ABC transporter compare
BPHYT_RS27455 -1.5 -1.1 rod shape-determining protein MreB compare
BPHYT_RS08125 -1.5 -6.8 ATPase compare
BPHYT_RS17945 -1.5 -1.6 cytochrome C biogenesis protein compare
BPHYT_RS18630 -1.5 -2.0 allophanate hydrolase compare
BPHYT_RS02540 -1.4 -1.3 hypothetical protein compare
BPHYT_RS10675 -1.4 -1.4 muconate cycloisomerase compare
BPHYT_RS01095 -1.4 -0.9 hypothetical protein compare
BPHYT_RS06325 -1.4 -4.5 ATPase compare
BPHYT_RS17530 -1.4 -3.1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BPHYT_RS33765 -1.4 -0.7 membrane protein compare
BPHYT_RS17095 -1.4 -1.6 proline--tRNA ligase compare
BPHYT_RS14485 -1.4 -3.2 ribonuclease E compare
BPHYT_RS01630 -1.4 -1.3 ATP-dependent protease ATPase subunit HslU compare
BPHYT_RS07690 -1.4 -2.0 AraC family transcriptional regulator compare
BPHYT_RS03570 -1.4 -4.3 heat-inducible transcription repressor HrcA compare
BPHYT_RS18655 -1.4 -2.7 3-oxoacyl-ACP synthase compare
BPHYT_RS29245 -1.4 -1.4 peptidase M23 compare
BPHYT_RS29920 -1.4 -0.7 hypothetical protein compare
BPHYT_RS06990 -1.4 -1.0 membrane protein compare
BPHYT_RS17100 -1.4 -4.1 RNA pyrophosphohydrolase compare
BPHYT_RS28575 -1.3 -0.8 transcriptional regulator compare
BPHYT_RS07845 -1.3 -2.8 LysR family transcriptional regulator compare
BPHYT_RS06175 -1.3 -3.0 LPS biosynthesis compare
BPHYT_RS33370 -1.3 -1.2 LysR family transcriptional regulator compare
BPHYT_RS34280 -1.3 -1.7 hypothetical protein compare
BPHYT_RS18985 -1.3 -1.8 hypothetical protein compare
BPHYT_RS23880 -1.3 -1.8 sugar ABC transporter permease compare
BPHYT_RS04955 -1.3 -1.4 methionyl-tRNA synthetase compare
BPHYT_RS22530 -1.3 -1.1 N5,N10-methylene tetrahydromethanopterin reductase compare
BPHYT_RS32280 -1.3 -1.5 membrane protein compare
BPHYT_RS32250 -1.3 -2.0 membrane protein compare
BPHYT_RS12840 -1.3 -2.6 pyruvate dehydrogenase compare
BPHYT_RS00055 -1.3 -1.5 hypothetical protein compare
BPHYT_RS08995 -1.3 -1.0 hypothetical protein compare
BPHYT_RS33535 -1.3 -7.9 RNA polymerase sigma factor RpoD compare
BPHYT_RS26820 -1.3 -1.4 LysR family transcriptional regulator compare
BPHYT_RS04720 -1.3 -4.8 transcriptional regulator compare
BPHYT_RS35730 -1.3 -1.4 hypothetical protein compare
BPHYT_RS12550 -1.3 -0.8 GTP-binding protein HflX compare
BPHYT_RS23940 -1.3 -1.1 GntR family transcriptional regulator compare
BPHYT_RS35275 -1.3 -1.0 acetyltransferase compare
BPHYT_RS08805 -1.3 -4.4 sulfate ABC transporter ATP-binding protein compare
BPHYT_RS33385 -1.3 -1.2 major facilitator superfamily protein compare
BPHYT_RS04385 -1.2 -1.9 nucleoside-diphosphate sugar oxidoreductase compare
BPHYT_RS17445 -1.2 -2.3 GTP-binding protein YchF compare
BPHYT_RS30450 -1.2 -0.7 ABC transporter permease compare
BPHYT_RS26185 -1.2 -0.9 thioesterase compare
BPHYT_RS33540 -1.2 -2.7 hypothetical protein compare
BPHYT_RS06155 -1.2 -3.9 DEAD/DEAH box helicase compare
BPHYT_RS23265 -1.2 -2.8 methylcrotonoyl-CoA carboxylase compare
BPHYT_RS26895 -1.2 -3.2 nicotinate phosphoribosyltransferase compare
BPHYT_RS04630 -1.2 -1.6 amino acid ABC transporter permease compare
BPHYT_RS16320 -1.2 -2.4 cyclic pyranopterin monophosphate synthase accessory protein compare
BPHYT_RS04445 -1.2 -3.0 amino acid ABC transporter substrate-binding protein compare
BPHYT_RS34780 -1.2 -2.5 phytoene synthase compare
BPHYT_RS05505 -1.2 -3.2 histidine/lysine/arginine/ornithine ABC transporter permease HisQ compare
BPHYT_RS02300 -1.2 -1.0 acid shock protein compare
BPHYT_RS25370 -1.2 -0.9 acyl-CoA dehydrogenase compare
BPHYT_RS26570 -1.2 -0.7 5'-nucleotidase compare
BPHYT_RS16675 -1.2 -0.7 dihydroorotase compare
BPHYT_RS14550 -1.2 -0.7 tRNA-Asn compare
BPHYT_RS04220 -1.2 -4.2 hypothetical protein compare
BPHYT_RS34025 -1.2 -1.5 hypothetical protein compare
BPHYT_RS03475 -1.2 -5.1 catalase compare
BPHYT_RS28300 -1.2 -0.9 histone nucleoid-structuring protein H-NS compare
BPHYT_RS13885 -1.2 -1.2 myo-inositol 2-dehydrogenase compare
BPHYT_RS21595 -1.2 -1.4 TetR family transcriptional regulator compare
BPHYT_RS23475 -1.1 -0.7 luciferase compare
BPHYT_RS15290 -1.1 -1.6 tRNA-Arg compare
BPHYT_RS18635 -1.1 -1.7 LamB/YcsF family protein compare
BPHYT_RS28280 -1.1 -1.1 hypothetical protein compare


Specific Phenotypes

For 2 genes in this experiment