Experiment set21IT027 for Burkholderia phytofirmans PsJN

Compare to:

Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant

200 most important genes:

  gene name fitness t score description  
BPHYT_RS26390 -4.6 -1.1 antibiotic resistance protein compare
BPHYT_RS04965 -4.6 -8.2 ATP-binding protein compare
BPHYT_RS29855 -4.6 -1.0 protein-tyrosine-phosphatase compare
BPHYT_RS17625 -4.3 -13.6 cytochrome B compare
BPHYT_RS09860 -4.3 -1.0 pilus assembly protein PilP compare
BPHYT_RS24095 -4.2 -4.8 membrane protein compare
BPHYT_RS16880 -4.2 -1.6 malic enzyme compare
BPHYT_RS33765 -4.1 -0.9 membrane protein compare
BPHYT_RS16710 -4.0 -0.9 LysR family transcriptional regulator compare
BPHYT_RS17620 -4.0 -8.9 cytochrome C compare
BPHYT_RS16320 -3.8 -3.7 cyclic pyranopterin monophosphate synthase accessory protein compare
BPHYT_RS12465 -3.7 -1.7 inositol monophosphatase compare
BPHYT_RS35720 -3.7 -7.1 phosphopantetheinyl transferase compare
BPHYT_RS17630 -3.5 -5.0 ubiquinol-cytochrome C reductase compare
BPHYT_RS03480 -3.5 -5.3 ferritin compare
BPHYT_RS31635 -3.3 -2.3 choline dehydrogenase compare
BPHYT_RS26855 -3.3 -2.8 carboxyvinyl-carboxyphosphonate phosphorylmutase compare
BPHYT_RS15620 -3.3 -3.9 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS17520 -3.3 -3.8 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase compare
BPHYT_RS02570 -3.3 -2.7 phosphocarrier protein HPr compare
BPHYT_RS33610 -3.2 -1.0 DNA polymerase I compare
BPHYT_RS01620 -3.1 -5.5 sensor histidine kinase compare
BPHYT_RS06685 -3.0 -1.4 NADH:ubiquinone oxidoreductase subunit M compare
BPHYT_RS15710 -3.0 -1.2 ATP-dependent Clp protease ATP-binding protein compare
BPHYT_RS16175 -3.0 -2.1 hemolysin D compare
BPHYT_RS12280 -3.0 -0.9 RNA helicase compare
BPHYT_RS14140 -2.9 -3.9 phosphate transporter permease subunit PstC compare
BPHYT_RS33695 -2.8 -2.2 molybdenum ABC transporter ATPase compare
BPHYT_RS33580 -2.8 -5.3 geranyltranstransferase compare
BPHYT_RS14490 -2.7 -10.4 molybdenum cofactor biosynthesis protein MoeA compare
BPHYT_RS16180 -2.7 -0.9 TetR family transcriptional regulator compare
BPHYT_RS26840 -2.7 -2.2 NADH dehydrogenase compare
BPHYT_RS17530 -2.6 -4.6 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BPHYT_RS13160 -2.6 -1.3 membrane protein compare
BPHYT_RS18710 -2.6 -3.4 membrane protein compare
BPHYT_RS33535 -2.6 -14.3 RNA polymerase sigma factor RpoD compare
BPHYT_RS32860 -2.5 -1.0 hypothetical protein compare
BPHYT_RS25335 -2.5 -1.0 hypothetical protein compare
BPHYT_RS08975 -2.5 -3.9 molybdenum cofactor biosynthesis protein MoaE compare
BPHYT_RS04890 -2.5 -1.1 cobalamin biosynthesis protein CobD compare
BPHYT_RS16255 -2.4 -4.5 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
BPHYT_RS08965 -2.3 -4.2 molybdenum cofactor biosynthesis protein MoaA compare
BPHYT_RS16835 -2.3 -5.5 glyceraldehyde-3-phosphate dehydrogenase compare
BPHYT_RS17490 -2.3 -2.1 haloacid dehalogenase compare
BPHYT_RS29485 -2.3 -2.2 phosphonate ABC transporter ATP-binding protein compare
BPHYT_RS33615 -2.3 -2.6 decarboxylase compare
BPHYT_RS20750 -2.3 -1.5 LacI family transcriptional regulator compare
BPHYT_RS17955 -2.3 -3.0 cytochrome C compare
BPHYT_RS15325 -2.3 -3.2 ribonuclease PH compare
BPHYT_RS34295 -2.2 -0.9 fimbrial protein compare
BPHYT_RS16270 -2.2 -2.0 phosphoglycerate kinase compare
BPHYT_RS17945 -2.2 -1.8 cytochrome C biogenesis protein compare
BPHYT_RS33685 -2.2 -4.7 molybdate ABC transporter substrate-binding protein compare
BPHYT_RS05610 -2.2 -10.2 DNA-cytosine methyltransferase compare
BPHYT_RS31050 -2.2 -0.9 epimerase compare
BPHYT_RS06470 -2.2 -1.2 membrane protein compare
BPHYT_RS12990 -2.2 -2.0 iron transporter compare
BPHYT_RS30365 -2.2 -0.7 beta-lactamase compare
BPHYT_RS03400 -2.2 -0.7 ATP-dependent DNA helicase RecG compare
BPHYT_RS02860 -2.2 -0.7 membrane protein compare
BPHYT_RS29520 -2.2 -0.9 hypothetical protein compare
BPHYT_RS03475 -2.2 -7.3 catalase compare
BPHYT_RS33150 -2.2 -0.8 beta-lactamase compare
BPHYT_RS02575 -2.2 -7.6 phosphoenolpyruvate-protein phosphotransferase compare
BPHYT_RS28575 -2.2 -1.0 transcriptional regulator compare
BPHYT_RS35730 -2.2 -3.1 hypothetical protein compare
BPHYT_RS33920 -2.2 -5.1 type II citrate synthase compare
BPHYT_RS24500 -2.1 -1.3 histidine kinase compare
BPHYT_RS11765 -2.1 -0.9 polyamine ABC transporter permease compare
BPHYT_RS05705 -2.1 -0.9 hypothetical protein compare
BPHYT_RS08340 -2.1 -0.5 chemotaxis protein CheY compare
BPHYT_RS13605 -2.1 -0.8 tRNA-Pro compare
BPHYT_RS11555 -2.1 -1.9 allantoinase compare
BPHYT_RS10165 -2.1 -1.1 transcriptional regulator compare
BPHYT_RS33655 -2.1 -2.9 MarR family transcriptional regulator compare
BPHYT_RS14670 -2.0 -1.1 hypothetical protein compare
BPHYT_RS26570 -2.0 -0.9 5'-nucleotidase compare
BPHYT_RS02525 -2.0 -7.2 membrane protein compare
BPHYT_RS30810 -2.0 -1.5 transcriptional regulator compare
BPHYT_RS30995 -2.0 -0.9 glucose-1-phosphate thymidylyltransferase compare
BPHYT_RS14190 -2.0 -7.0 carbamoyl phosphate synthase large subunit compare
BPHYT_RS10095 -2.0 -1.8 integrase compare
BPHYT_RS27295 -2.0 -1.5 hypothetical protein compare
BPHYT_RS20235 -1.9 -5.6 iron ABC transporter compare
BPHYT_RS34655 -1.9 -1.5 2-amino-3-ketobutyrate CoA ligase compare
BPHYT_RS15320 -1.9 -1.9 hypothetical protein compare
BPHYT_RS33690 -1.9 -1.6 molybdate ABC transporter permease compare
BPHYT_RS04015 -1.9 -1.5 glycosyl transferase compare
BPHYT_RS04285 -1.9 -1.3 rhamnosyltransferase compare
BPHYT_RS33965 -1.9 -1.7 methylcitrate synthase compare
BPHYT_RS35735 -1.9 -1.3 nitroreductase compare
BPHYT_RS23455 -1.9 -0.8 phosphorylase compare
BPHYT_RS03645 -1.9 -1.5 tRNA dimethylallyltransferase compare
BPHYT_RS25935 -1.9 -1.8 type III secretion protein compare
BPHYT_RS17035 -1.9 -2.7 sugar kinase compare
BPHYT_RS12785 -1.9 -2.7 Rrf2 family transcriptional regulator compare
BPHYT_RS06985 -1.9 -5.3 fumarate hydratase compare
BPHYT_RS14715 -1.9 -6.1 molybdenum cofactor biosynthesis protein MogA compare
BPHYT_RS06190 -1.8 -2.6 heptosyltransferase compare
BPHYT_RS12845 -1.8 -10.8 ATPase compare
BPHYT_RS31910 -1.8 -1.4 hypothetical protein compare
BPHYT_RS03455 -1.8 -1.5 paraquat-inducible protein A compare
BPHYT_RS33515 -1.8 -8.1 porin compare
BPHYT_RS27495 -1.7 -0.8 hypothetical protein compare
BPHYT_RS31385 -1.7 -1.8 ketoacyl reductase compare
BPHYT_RS16470 -1.7 -4.0 DeoR faimly transcriptional regulator compare
BPHYT_RS12725 -1.7 -7.8 regulator compare
BPHYT_RS08960 -1.7 -1.1 threonine synthase compare
BPHYT_RS03325 -1.7 -1.8 hypothetical protein compare
BPHYT_RS09515 -1.7 -2.3 phosphoribosylformylglycinamidine synthase compare
BPHYT_RS14195 -1.7 -1.5 carbamoyl phosphate synthase small subunit compare
BPHYT_RS35885 -1.6 -3.0 hypothetical protein compare
BPHYT_RS03945 -1.6 -1.5 hypothetical protein compare
BPHYT_RS15070 -1.6 -3.5 amidase compare
BPHYT_RS06990 -1.6 -1.0 membrane protein compare
BPHYT_RS16340 -1.6 -3.7 succinyl-CoA synthetase subunit alpha compare
BPHYT_RS02590 -1.6 -4.5 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
BPHYT_RS28930 -1.6 -0.9 chromosome partitioning protein ParA compare
BPHYT_RS20245 -1.6 -3.9 iron ABC transporter substrate-binding protein compare
BPHYT_RS06075 -1.6 -4.5 hypothetical protein compare
BPHYT_RS14550 -1.6 -0.8 tRNA-Asn compare
BPHYT_RS18250 -1.6 -5.7 phenylacetate-CoA oxygenase subunit PaaA compare
BPHYT_RS26080 -1.6 -0.9 ABC transporter ATPase compare
BPHYT_RS19660 -1.6 -1.2 hypothetical protein compare
BPHYT_RS14865 -1.6 -1.4 UDP-glucose 6-dehydrogenase compare
BPHYT_RS06600 -1.6 -1.4 polynucleotide phosphorylase/polyadenylase compare
BPHYT_RS07540 -1.5 -0.9 hypothetical protein compare
BPHYT_RS18260 -1.5 -5.9 phenylacetic acid degradation protein compare
BPHYT_RS00980 -1.5 -0.8 GCN5 family acetyltransferase compare
BPHYT_RS14245 -1.5 -1.2 membrane protein compare
BPHYT_RS29920 -1.5 -0.7 hypothetical protein compare
BPHYT_RS16345 -1.5 -3.3 succinyl-CoA ligase [ADP-forming] subunit beta compare
BPHYT_RS16085 -1.5 -3.0 DeoR faimly transcriptional regulator compare
BPHYT_RS15075 -1.5 -0.8 dihydrokaempferol 4-reductase compare
BPHYT_RS02865 -1.5 -2.0 hypothetical protein compare
BPHYT_RS16020 -1.5 -1.8 AsnC family transcriptional regulator compare
BPHYT_RS03215 -1.5 -1.7 TetR family transcriptional regulator compare
BPHYT_RS09825 -1.5 -1.6 Fe-S protein compare
BPHYT_RS03570 -1.5 -3.3 heat-inducible transcription repressor HrcA compare
BPHYT_RS26880 -1.5 -1.6 ketosteroid isomerase compare
BPHYT_RS25095 -1.5 -1.5 AraC family transcriptional regulator compare
BPHYT_RS22360 -1.5 -1.8 response regulator receiver compare
BPHYT_RS00325 -1.5 -1.0 hypothetical protein compare
BPHYT_RS08335 -1.5 -0.9 hypothetical protein compare
BPHYT_RS15305 -1.4 -4.9 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
BPHYT_RS17085 -1.4 -4.7 hypoxanthine phosphoribosyltransferase compare
BPHYT_RS31525 -1.4 -1.6 hypothetical protein compare
BPHYT_RS09330 -1.4 -7.0 phytoene synthase compare
BPHYT_RS01435 -1.4 -11.2 LysR family transcriptional regulator compare
BPHYT_RS21620 -1.4 -1.0 GCN5 family acetyltransferase compare
BPHYT_RS03580 -1.4 -2.1 RNA-binding protein S4 compare
BPHYT_RS11685 -1.4 -0.8 phasin family protein compare
BPHYT_RS36435 -1.4 -1.8 hypothetical protein compare
BPHYT_RS12055 -1.4 -9.3 phosphoenolpyruvate synthase compare
BPHYT_RS31065 -1.4 -2.7 polysaccharide biosynthesis protein compare
BPHYT_RS25025 -1.4 -3.0 acyl-CoA dehydrogenase compare
BPHYT_RS06410 -1.4 -1.4 transcriptional regulator compare
BPHYT_RS24565 -1.4 -2.7 membrane protein compare
BPHYT_RS01730 -1.4 -1.5 serine/threonine protein kinase compare
BPHYT_RS07475 -1.4 -1.0 nitrate reductase compare
BPHYT_RS33540 -1.4 -1.4 hypothetical protein compare
BPHYT_RS33950 -1.3 -7.0 GntR family transcriptional regulator compare
BPHYT_RS30645 -1.3 -1.6 hypothetical protein compare
BPHYT_RS36220 -1.3 -0.8 hypothetical protein compare
BPHYT_RS30685 -1.3 -2.7 ubiquinol oxidase subunit II, cyanide insensitive compare
BPHYT_RS22485 -1.3 -2.5 NADP-dependent aryl-alcohol dehydrogenase compare
BPHYT_RS23570 -1.3 -3.5 chemotaxis protein CheY compare
BPHYT_RS06905 -1.3 -5.6 excinuclease ABC subunit B compare
BPHYT_RS14740 -1.3 -3.8 threonine-phosphate decarboxylase compare
BPHYT_RS31815 -1.3 -2.3 hypothetical protein compare
BPHYT_RS16840 -1.3 -1.8 transketolase compare
BPHYT_RS32595 -1.3 -1.6 hypothetical protein compare
BPHYT_RS04290 -1.3 -0.9 glycosyl transferase family 2 compare
BPHYT_RS22060 -1.3 -9.0 amino acid transporter compare
BPHYT_RS29320 -1.3 -1.3 histidine kinase compare
BPHYT_RS30145 -1.3 -3.1 aconitate hydratase compare
BPHYT_RS35675 -1.3 -1.3 short-chain dehydrogenase compare
BPHYT_RS05980 -1.3 -3.7 heat shock protein 90 compare
BPHYT_RS15415 -1.3 -6.1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BPHYT_RS22940 -1.3 -0.8 pilus assembly protein TadE compare
BPHYT_RS16675 -1.3 -0.6 dihydroorotase compare
BPHYT_RS17095 -1.3 -1.6 proline--tRNA ligase compare
BPHYT_RS23975 -1.3 -1.6 peroxidase compare
BPHYT_RS04955 -1.3 -1.2 methionyl-tRNA synthetase compare
BPHYT_RS17240 -1.3 -0.7 cell division protein FtsW compare
BPHYT_RS10930 -1.3 -2.5 GCN5 family N-acetyltransferase compare
BPHYT_RS06530 -1.3 -0.7 membrane protein compare
BPHYT_RS23940 -1.3 -1.0 GntR family transcriptional regulator compare
BPHYT_RS08850 -1.3 -0.9 transcriptional regulator compare
BPHYT_RS04385 -1.3 -1.6 nucleoside-diphosphate sugar oxidoreductase compare
BPHYT_RS05395 -1.3 -1.0 hypothetical protein compare
BPHYT_RS23230 -1.3 -0.5 histidine kinase compare
BPHYT_RS06405 -1.2 -3.6 phosphoribosylamine--glycine ligase compare
BPHYT_RS33645 -1.2 -3.9 homoserine kinase compare
BPHYT_RS00885 -1.2 -1.4 chemotaxis protein CheY compare
BPHYT_RS33375 -1.2 -1.6 membrane protein compare
BPHYT_RS03015 -1.2 -0.6 aldolase compare
BPHYT_RS28745 -1.2 -2.5 2-keto-4-pentenoate hydratase compare
BPHYT_RS32260 -1.2 -1.1 hypothetical protein compare
BPHYT_RS17860 -1.2 -2.4 transposase compare


Specific Phenotypes

For 7 genes in this experiment